Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.11□□□□□ -0.15
Trav6-2Q5R1I4 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-2Q5R1I4 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.11□□□□□ -0.15
Trav6-2Q5R1I4 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav6-2Q5R1I4 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-2Q5R1I4 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Trav6-2Q5R1I4 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-2Q5R1I4 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-2Q5R1I4 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav6-2Q5R1I4 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.11□□□□□ -0.15
Trav6-2Q5R1I4 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav6-2Q5R1I4 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-2Q5R1I4 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-2Q5R1I4 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-2Q5R1I4 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.1□□□□□ -0.15
Trav6-2Q5R1I4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-2Q5R1I4 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-2Q5R1I4 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-2Q5R1I4 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav6-2Q5R1I4 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.1□□□□□ -0.15
Trav6-2Q5R1I4 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-2Q5R1I4 Gm27628-201ENSMUST00000184911 107 ntBASIC14.1□□□□□ -0.15
Trav6-2Q5R1I4 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.1□□□□□ -0.15
Trav6-2Q5R1I4 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav6-2Q5R1I4 Gm18622-201ENSMUST00000219361 595 ntBASIC14.1□□□□□ -0.15
Trav6-2Q5R1I4 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-2Q5R1I4 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-2Q5R1I4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-2Q5R1I4 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-2Q5R1I4 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-2Q5R1I4 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trav6-2Q5R1I4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Trav6-2Q5R1I4 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trav6-2Q5R1I4 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-2Q5R1I4 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-2Q5R1I4 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-2Q5R1I4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav6-2Q5R1I4 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-2Q5R1I4 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-2Q5R1I4 Rarb-207ENSMUST00000225921 2756 ntBASIC14.1□□□□□ -0.15
Trav6-2Q5R1I4 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trav6-2Q5R1I4 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-2Q5R1I4 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.09□□□□□ -0.15
Trav6-2Q5R1I4 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-2Q5R1I4 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-2Q5R1I4 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-2Q5R1I4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav6-2Q5R1I4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-2Q5R1I4 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-2Q5R1I4 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-2Q5R1I4 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-2Q5R1I4 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.09□□□□□ -0.15
Trav6-2Q5R1I4 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.09□□□□□ -0.15
Trav6-2Q5R1I4 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-2Q5R1I4 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trav6-2Q5R1I4 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trav6-2Q5R1I4 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-2Q5R1I4 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-2Q5R1I4 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-2Q5R1I4 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-2Q5R1I4 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav6-2Q5R1I4 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-2Q5R1I4 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-2Q5R1I4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-2Q5R1I4 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav6-2Q5R1I4 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav6-2Q5R1I4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-2Q5R1I4 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-2Q5R1I4 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trav6-2Q5R1I4 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav6-2Q5R1I4 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-2Q5R1I4 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav6-2Q5R1I4 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav6-2Q5R1I4 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav6-2Q5R1I4 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav6-2Q5R1I4 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trav6-2Q5R1I4 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trav6-2Q5R1I4 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-2Q5R1I4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-2Q5R1I4 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-2Q5R1I4 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.08□□□□□ -0.16
Trav6-2Q5R1I4 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-2Q5R1I4 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.08□□□□□ -0.16
Trav6-2Q5R1I4 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.08□□□□□ -0.16
Trav6-2Q5R1I4 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.08□□□□□ -0.16
Trav6-2Q5R1I4 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trav6-2Q5R1I4 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-2Q5R1I4 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-2Q5R1I4 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-2Q5R1I4 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trav6-2Q5R1I4 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trav6-2Q5R1I4 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-2Q5R1I4 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-2Q5R1I4 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.08□□□□□ -0.16
Trav6-2Q5R1I4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-2Q5R1I4 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.08□□□□□ -0.16
Trav6-2Q5R1I4 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-2Q5R1I4 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Trav6-2Q5R1I4 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-2Q5R1I4 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms