Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 Gm10517-202ENSMUST00000192970 758 ntBASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8d-1Q5R1H8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav8d-1Q5R1H8 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Trav8d-1Q5R1H8 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav8d-1Q5R1H8 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav8d-1Q5R1H8 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.22□□□□□ -0.29
Trav8d-1Q5R1H8 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.22□□□□□ -0.29
Trav8d-1Q5R1H8 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav8d-1Q5R1H8 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav8d-1Q5R1H8 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav8d-1Q5R1H8 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav8d-1Q5R1H8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav8d-1Q5R1H8 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav8d-1Q5R1H8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav8d-1Q5R1H8 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.22□□□□□ -0.29
Trav8d-1Q5R1H8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav8d-1Q5R1H8 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.22□□□□□ -0.29
Trav8d-1Q5R1H8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trav8d-1Q5R1H8 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav8d-1Q5R1H8 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav8d-1Q5R1H8 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav8d-1Q5R1H8 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.22□□□□□ -0.29
Trav8d-1Q5R1H8 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav8d-1Q5R1H8 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav8d-1Q5R1H8 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav8d-1Q5R1H8 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav8d-1Q5R1H8 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav8d-1Q5R1H8 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav8d-1Q5R1H8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav8d-1Q5R1H8 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav8d-1Q5R1H8 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav8d-1Q5R1H8 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav8d-1Q5R1H8 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav8d-1Q5R1H8 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav8d-1Q5R1H8 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav8d-1Q5R1H8 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav8d-1Q5R1H8 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav8d-1Q5R1H8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.21□□□□□ -0.29
Trav8d-1Q5R1H8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Trav8d-1Q5R1H8 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC13.21□□□□□ -0.29
Trav8d-1Q5R1H8 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Trav8d-1Q5R1H8 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.21□□□□□ -0.29
Trav8d-1Q5R1H8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav8d-1Q5R1H8 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav8d-1Q5R1H8 Odf3b-204ENSMUST00000227834 930 ntBASIC13.21□□□□□ -0.29
Trav8d-1Q5R1H8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC13.21□□□□□ -0.29
Trav8d-1Q5R1H8 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav8d-1Q5R1H8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav8d-1Q5R1H8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trav8d-1Q5R1H8 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav8d-1Q5R1H8 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav8d-1Q5R1H8 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav8d-1Q5R1H8 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav8d-1Q5R1H8 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav8d-1Q5R1H8 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav8d-1Q5R1H8 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav8d-1Q5R1H8 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav8d-1Q5R1H8 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav8d-1Q5R1H8 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav8d-1Q5R1H8 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav8d-1Q5R1H8 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.21□□□□□ -0.3
Trav8d-1Q5R1H8 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav8d-1Q5R1H8 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms