Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
RXRBP28702 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC24.82■■□□□ 1.56
RXRBP28702 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC24.82■■□□□ 1.56
RXRBP28702 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC24.82■■□□□ 1.56
RXRBP28702 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC24.82■■□□□ 1.56
RXRBP28702 AP002472.1-201ENST00000577490 586 ntBASIC24.82■■□□□ 1.56
RXRBP28702 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
RXRBP28702 AP001271.2-201ENST00000624018 1556 ntBASIC24.82■■□□□ 1.56
RXRBP28702 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC24.82■■□□□ 1.56
RXRBP28702 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
RXRBP28702 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
RXRBP28702 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC24.82■■□□□ 1.56
RXRBP28702 ANKRD18DP-204ENST00000455355 1975 ntBASIC24.82■■□□□ 1.56
RXRBP28702 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC24.81■■□□□ 1.56
RXRBP28702 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RXRBP28702 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
RXRBP28702 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RXRBP28702 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RXRBP28702 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
RXRBP28702 AC254562.1-201ENST00000417586 456 ntBASIC24.81■■□□□ 1.56
RXRBP28702 AC007967.2-201ENST00000432613 625 ntBASIC24.81■■□□□ 1.56
RXRBP28702 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC24.81■■□□□ 1.56
RXRBP28702 PPOX-214ENST00000535223 664 ntTSL 3 BASIC24.81■■□□□ 1.56
RXRBP28702 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC24.81■■□□□ 1.56
RXRBP28702 AC104390.1-201ENST00000555663 520 ntBASIC24.81■■□□□ 1.56
RXRBP28702 AC012640.2-201ENST00000561606 901 ntBASIC24.81■■□□□ 1.56
RXRBP28702 PAM16-208ENST00000573553 722 ntTSL 2 BASIC24.81■■□□□ 1.56
RXRBP28702 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
RXRBP28702 TEN1-204ENST00000588202 862 ntTSL 3 BASIC24.81■■□□□ 1.56
RXRBP28702 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RXRBP28702 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC24.81■■□□□ 1.56
RXRBP28702 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RXRBP28702 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RXRBP28702 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RXRBP28702 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC24.8■■□□□ 1.56
RXRBP28702 FEM1AP1-201ENST00000431297 1995 ntBASIC24.8■■□□□ 1.56
RXRBP28702 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RXRBP28702 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RXRBP28702 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RXRBP28702 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC24.8■■□□□ 1.56
RXRBP28702 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC24.8■■□□□ 1.56
RXRBP28702 AC005829.1-201ENST00000570002 483 ntBASIC24.8■■□□□ 1.56
RXRBP28702 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC24.8■■□□□ 1.56
RXRBP28702 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RXRBP28702 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC24.8■■□□□ 1.56
RXRBP28702 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC24.8■■□□□ 1.56
RXRBP28702 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RXRBP28702 AL353692.3-201ENST00000407031 1396 ntBASIC24.8■■□□□ 1.56
RXRBP28702 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RXRBP28702 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC24.79■■□□□ 1.56
RXRBP28702 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
RXRBP28702 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RXRBP28702 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC24.79■■□□□ 1.56
RXRBP28702 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
RXRBP28702 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RXRBP28702 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RXRBP28702 PLK5-205ENST00000642079 1969 ntBASIC24.79■■□□□ 1.56
RXRBP28702 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RXRBP28702 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
RXRBP28702 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC24.79■■□□□ 1.56
RXRBP28702 ERF-202ENST00000440177 2032 ntTSL 2 BASIC24.79■■□□□ 1.56
RXRBP28702 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
RXRBP28702 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RXRBP28702 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC24.79■■□□□ 1.56
RXRBP28702 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RXRBP28702 KRT8P3-201ENST00000519669 1449 ntBASIC24.78■■□□□ 1.56
RXRBP28702 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RXRBP28702 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.78■■□□□ 1.56
RXRBP28702 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
RXRBP28702 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RXRBP28702 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC24.78■■□□□ 1.56
RXRBP28702 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.78■■□□□ 1.56
RXRBP28702 MED16-201ENST00000269814 1199 ntTSL 5 BASIC24.78■■□□□ 1.56
RXRBP28702 COX5A-204ENST00000567270 579 ntTSL 3 BASIC24.78■■□□□ 1.56
RXRBP28702 AL096865.1-201ENST00000606796 927 ntBASIC24.78■■□□□ 1.56
RXRBP28702 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
RXRBP28702 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC24.78■■□□□ 1.56
RXRBP28702 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
RXRBP28702 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
RXRBP28702 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
RXRBP28702 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RXRBP28702 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC24.77■■□□□ 1.56
RXRBP28702 PBK-203ENST00000522944 1499 ntTSL 2 BASIC24.77■■□□□ 1.56
RXRBP28702 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RXRBP28702 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
RXRBP28702 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RXRBP28702 RCN1P2-201ENST00000398357 915 ntBASIC24.77■■□□□ 1.56
RXRBP28702 AC092474.2-201ENST00000424288 719 ntBASIC24.77■■□□□ 1.56
RXRBP28702 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RXRBP28702 BCRP1-201ENST00000444246 691 ntBASIC24.77■■□□□ 1.56
RXRBP28702 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC24.77■■□□□ 1.56
RXRBP28702 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RXRBP28702 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RXRBP28702 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC24.77■■□□□ 1.56
RXRBP28702 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
RXRBP28702 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC24.77■■□□□ 1.56
RXRBP28702 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RXRBP28702 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
RXRBP28702 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC24.76■■□□□ 1.55
RXRBP28702 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms