Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
CFTRP13569 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC32.48■■■□□ 2.79
CFTRP13569 ELP6-205ENST00000439305 880 ntTSL 2 BASIC32.48■■■□□ 2.79
CFTRP13569 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC32.48■■■□□ 2.79
CFTRP13569 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC32.48■■■□□ 2.79
CFTRP13569 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC32.48■■■□□ 2.79
CFTRP13569 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC32.48■■■□□ 2.79
CFTRP13569 BNIP3P18-201ENST00000593976 575 ntBASIC32.48■■■□□ 2.79
CFTRP13569 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
CFTRP13569 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC32.47■■■□□ 2.79
CFTRP13569 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC32.47■■■□□ 2.79
CFTRP13569 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC32.47■■■□□ 2.79
CFTRP13569 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
CFTRP13569 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
CFTRP13569 AL031284.1-201ENST00000419297 478 ntBASIC32.47■■■□□ 2.79
CFTRP13569 AC106730.1-201ENST00000566722 1090 ntBASIC32.47■■■□□ 2.79
CFTRP13569 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
CFTRP13569 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC32.47■■■□□ 2.79
CFTRP13569 PBK-203ENST00000522944 1499 ntTSL 2 BASIC32.47■■■□□ 2.79
CFTRP13569 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
CFTRP13569 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC32.46■■■□□ 2.79
CFTRP13569 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC32.46■■■□□ 2.79
CFTRP13569 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CFTRP13569 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC32.46■■■□□ 2.79
CFTRP13569 MIR3180-4-201ENST00000582223 153 ntBASIC32.46■■■□□ 2.79
CFTRP13569 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC32.46■■■□□ 2.79
CFTRP13569 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC32.46■■■□□ 2.79
CFTRP13569 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
CFTRP13569 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
CFTRP13569 RCC2P3-201ENST00000418112 1537 ntBASIC32.46■■■□□ 2.79
CFTRP13569 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC32.45■■■□□ 2.79
CFTRP13569 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC32.45■■■□□ 2.79
CFTRP13569 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
CFTRP13569 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
CFTRP13569 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
CFTRP13569 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC32.45■■■□□ 2.79
CFTRP13569 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC32.45■■■□□ 2.79
CFTRP13569 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC32.45■■■□□ 2.79
CFTRP13569 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC32.45■■■□□ 2.79
CFTRP13569 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC32.45■■■□□ 2.78
CFTRP13569 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC32.45■■■□□ 2.78
CFTRP13569 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
CFTRP13569 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
CFTRP13569 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC32.44■■■□□ 2.78
CFTRP13569 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC32.44■■■□□ 2.78
CFTRP13569 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
CFTRP13569 AC008556.1-201ENST00000610908 2040 ntBASIC32.44■■■□□ 2.78
CFTRP13569 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
CFTRP13569 ENSA-205ENST00000361532 792 ntTSL 2 BASIC32.44■■■□□ 2.78
CFTRP13569 MED22-202ENST00000371999 987 ntTSL 3 BASIC32.44■■■□□ 2.78
CFTRP13569 MIR1233-2-201ENST00000408138 82 ntBASIC32.44■■■□□ 2.78
CFTRP13569 MIR1233-1-201ENST00000408722 82 ntBASIC32.44■■■□□ 2.78
CFTRP13569 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC32.44■■■□□ 2.78
CFTRP13569 MOK-208ENST00000519058 917 ntTSL 2 BASIC32.44■■■□□ 2.78
CFTRP13569 RNPS1P1-201ENST00000507437 918 ntBASIC32.43■■■□□ 2.78
CFTRP13569 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC32.43■■■□□ 2.78
CFTRP13569 ABBA01031661.1-201ENST00000634362 1253 ntBASIC32.43■■■□□ 2.78
CFTRP13569 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
CFTRP13569 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
CFTRP13569 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
CFTRP13569 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
CFTRP13569 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC32.43■■■□□ 2.78
CFTRP13569 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
CFTRP13569 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC32.43■■■□□ 2.78
CFTRP13569 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
CFTRP13569 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
CFTRP13569 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
CFTRP13569 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC32.42■■■□□ 2.78
CFTRP13569 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
CFTRP13569 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC32.42■■■□□ 2.78
CFTRP13569 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC32.42■■■□□ 2.78
CFTRP13569 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC32.42■■■□□ 2.78
CFTRP13569 FAM197Y8-203ENST00000450145 560 ntBASIC32.42■■■□□ 2.78
CFTRP13569 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
CFTRP13569 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC32.42■■■□□ 2.78
CFTRP13569 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC32.42■■■□□ 2.78
CFTRP13569 KRT89P-201ENST00000620027 1478 ntBASIC32.41■■■□□ 2.78
CFTRP13569 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
CFTRP13569 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
CFTRP13569 RPL18-209ENST00000550645 463 ntTSL 5 BASIC32.41■■■□□ 2.78
CFTRP13569 RPL18-214ENST00000552588 559 ntTSL 3 BASIC32.41■■■□□ 2.78
CFTRP13569 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC32.41■■■□□ 2.78
CFTRP13569 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC32.4■■■□□ 2.78
CFTRP13569 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC32.4■■■□□ 2.78
CFTRP13569 AL512353.2-201ENST00000448759 1962 ntBASIC32.4■■■□□ 2.78
CFTRP13569 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC32.4■■■□□ 2.78
CFTRP13569 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
CFTRP13569 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC32.4■■■□□ 2.78
CFTRP13569 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC32.4■■■□□ 2.78
CFTRP13569 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC32.4■■■□□ 2.78
CFTRP13569 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC32.4■■■□□ 2.78
CFTRP13569 COX10-202ENST00000429152 875 ntTSL 2 BASIC32.4■■■□□ 2.78
CFTRP13569 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC32.4■■■□□ 2.78
CFTRP13569 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC32.4■■■□□ 2.78
CFTRP13569 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC32.4■■■□□ 2.78
CFTRP13569 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC32.4■■■□□ 2.78
CFTRP13569 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
CFTRP13569 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC32.39■■■□□ 2.78
CFTRP13569 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC32.39■■■□□ 2.78
CFTRP13569 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms