Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
APOBP04114 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
APOBP04114 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC11.81□□□□□ -0.52
APOBP04114 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
APOBP04114 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC11.81□□□□□ -0.52
APOBP04114 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
APOBP04114 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
APOBP04114 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOBP04114 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOBP04114 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOBP04114 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOBP04114 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC11.81□□□□□ -0.52
APOBP04114 AL591684.3-201ENST00000605187 298 ntBASIC11.81□□□□□ -0.52
APOBP04114 AC009237.14-201ENST00000609975 1594 ntBASIC11.81□□□□□ -0.52
APOBP04114 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC11.81□□□□□ -0.52
APOBP04114 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOBP04114 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
APOBP04114 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
APOBP04114 AC079834.2-201ENST00000609776 1949 ntBASIC11.81□□□□□ -0.52
APOBP04114 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC11.81□□□□□ -0.52
APOBP04114 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOBP04114 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOBP04114 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
APOBP04114 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC11.81□□□□□ -0.52
APOBP04114 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
APOBP04114 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC11.81□□□□□ -0.52
APOBP04114 GRAMD4P1-201ENST00000435181 1110 ntBASIC11.81□□□□□ -0.52
APOBP04114 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC11.81□□□□□ -0.52
APOBP04114 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC11.81□□□□□ -0.52
APOBP04114 AC096582.2-201ENST00000510860 516 ntBASIC11.81□□□□□ -0.52
APOBP04114 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC11.81□□□□□ -0.52
APOBP04114 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC11.81□□□□□ -0.52
APOBP04114 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC11.8□□□□□ -0.52
APOBP04114 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOBP04114 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOBP04114 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
APOBP04114 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
APOBP04114 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
APOBP04114 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOBP04114 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOBP04114 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC11.8□□□□□ -0.52
APOBP04114 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOBP04114 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOBP04114 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOBP04114 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOBP04114 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC11.8□□□□□ -0.52
APOBP04114 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC11.8□□□□□ -0.52
APOBP04114 HNRNPDP1-201ENST00000439535 754 ntBASIC11.8□□□□□ -0.52
APOBP04114 FIS1-203ENST00000442303 631 ntTSL 3 BASIC11.8□□□□□ -0.52
APOBP04114 IGHV3-22-201ENST00000520721 359 ntBASIC11.8□□□□□ -0.52
APOBP04114 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC11.8□□□□□ -0.52
APOBP04114 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC11.8□□□□□ -0.52
APOBP04114 LITAF-211ENST00000572255 516 ntTSL 4 BASIC11.8□□□□□ -0.52
APOBP04114 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
APOBP04114 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC11.8□□□□□ -0.52
APOBP04114 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC11.8□□□□□ -0.52
APOBP04114 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC11.8□□□□□ -0.52
APOBP04114 AC233702.3-201ENST00000578656 1387 ntBASIC11.8□□□□□ -0.52
APOBP04114 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOBP04114 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOBP04114 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOBP04114 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOBP04114 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOBP04114 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOBP04114 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOBP04114 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
APOBP04114 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
APOBP04114 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
APOBP04114 RPL13AP23-201ENST00000480739 586 ntBASIC11.8□□□□□ -0.52
APOBP04114 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC11.8□□□□□ -0.52
APOBP04114 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC11.8□□□□□ -0.52
APOBP04114 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC11.8□□□□□ -0.52
APOBP04114 AC140113.2-201ENST00000604370 208 ntBASIC11.8□□□□□ -0.52
APOBP04114 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
APOBP04114 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
APOBP04114 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOBP04114 KRT8P3-201ENST00000519669 1449 ntBASIC11.79□□□□□ -0.52
APOBP04114 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOBP04114 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOBP04114 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
APOBP04114 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC11.79□□□□□ -0.52
APOBP04114 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC11.79□□□□□ -0.52
APOBP04114 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
APOBP04114 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC11.79□□□□□ -0.52
APOBP04114 TPM1-218ENST00000559281 851 ntTSL 5 BASIC11.79□□□□□ -0.52
APOBP04114 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC11.79□□□□□ -0.52
APOBP04114 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
APOBP04114 AC116407.3-201ENST00000623905 1129 ntBASIC11.79□□□□□ -0.52
APOBP04114 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC11.79□□□□□ -0.52
APOBP04114 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
APOBP04114 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC11.79□□□□□ -0.52
APOBP04114 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC11.79□□□□□ -0.52
APOBP04114 PMS2P7-201ENST00000506558 1336 ntBASIC11.79□□□□□ -0.52
APOBP04114 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC11.79□□□□□ -0.52
APOBP04114 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
APOBP04114 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC11.79□□□□□ -0.52
APOBP04114 FGFR3P6-201ENST00000457012 610 ntBASIC11.79□□□□□ -0.52
APOBP04114 RN7SL606P-201ENST00000472779 293 ntBASIC11.79□□□□□ -0.52
APOBP04114 AC104819.1-201ENST00000504587 486 ntBASIC11.79□□□□□ -0.52
APOBP04114 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms