Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL21O00585 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL21O00585 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.67■□□□□ 0.26
CCL21O00585 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCL21O00585 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL21O00585 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL21O00585 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.66■□□□□ 0.26
CCL21O00585 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCL21O00585 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCL21O00585 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCL21O00585 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCL21O00585 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CCL21O00585 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.66■□□□□ 0.26
CCL21O00585 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCL21O00585 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CCL21O00585 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.66■□□□□ 0.26
CCL21O00585 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.66■□□□□ 0.26
CCL21O00585 DRAXINP1-201ENST00000437611 948 ntBASIC16.66■□□□□ 0.26
CCL21O00585 AC009078.2-202ENST00000463353 338 ntBASIC16.66■□□□□ 0.26
CCL21O00585 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.66■□□□□ 0.26
CCL21O00585 FOSL1P1-201ENST00000511041 816 ntBASIC16.66■□□□□ 0.26
CCL21O00585 KRT8P3-201ENST00000519669 1449 ntBASIC16.66■□□□□ 0.26
CCL21O00585 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.66■□□□□ 0.26
CCL21O00585 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCL21O00585 TPSP2-201ENST00000561760 610 ntBASIC16.66■□□□□ 0.26
CCL21O00585 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CCL21O00585 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.66■□□□□ 0.26
CCL21O00585 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.66■□□□□ 0.26
CCL21O00585 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.66■□□□□ 0.26
CCL21O00585 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCL21O00585 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCL21O00585 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.66■□□□□ 0.26
CCL21O00585 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CCL21O00585 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL21O00585 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCL21O00585 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCL21O00585 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL21O00585 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL21O00585 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.65■□□□□ 0.26
CCL21O00585 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CCL21O00585 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL21O00585 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.65■□□□□ 0.26
CCL21O00585 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.65■□□□□ 0.26
CCL21O00585 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.65■□□□□ 0.26
CCL21O00585 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CCL21O00585 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.65■□□□□ 0.26
CCL21O00585 AC012615.1-201ENST00000565797 1299 ntBASIC16.65■□□□□ 0.26
CCL21O00585 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CCL21O00585 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.65■□□□□ 0.26
CCL21O00585 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.65■□□□□ 0.26
CCL21O00585 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCL21O00585 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.65■□□□□ 0.26
CCL21O00585 AL031008.1-201ENST00000619963 541 ntBASIC16.65■□□□□ 0.26
CCL21O00585 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CCL21O00585 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.65■□□□□ 0.26
CCL21O00585 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL21O00585 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCL21O00585 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL21O00585 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL21O00585 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CCL21O00585 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCL21O00585 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
CCL21O00585 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CCL21O00585 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CCL21O00585 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
CCL21O00585 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
CCL21O00585 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL21O00585 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL21O00585 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL21O00585 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.64■□□□□ 0.25
CCL21O00585 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL21O00585 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL21O00585 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL21O00585 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.64■□□□□ 0.25
CCL21O00585 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCL21O00585 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.64■□□□□ 0.25
CCL21O00585 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.64■□□□□ 0.25
CCL21O00585 TOB2P1-201ENST00000469761 992 ntBASIC16.64■□□□□ 0.25
CCL21O00585 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.64■□□□□ 0.25
CCL21O00585 AL160237.2-201ENST00000556165 472 ntBASIC16.64■□□□□ 0.25
CCL21O00585 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.64■□□□□ 0.25
CCL21O00585 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.64■□□□□ 0.25
CCL21O00585 RNF126P1-202ENST00000569893 925 ntBASIC16.64■□□□□ 0.25
CCL21O00585 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
CCL21O00585 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCL21O00585 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.64■□□□□ 0.25
CCL21O00585 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL21O00585 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.64■□□□□ 0.25
CCL21O00585 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCL21O00585 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.63■□□□□ 0.25
CCL21O00585 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL21O00585 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.63■□□□□ 0.25
CCL21O00585 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.63■□□□□ 0.25
CCL21O00585 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL21O00585 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CCL21O00585 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.63■□□□□ 0.25
CCL21O00585 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
CCL21O00585 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.63■□□□□ 0.25
CCL21O00585 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.63■□□□□ 0.25
CCL21O00585 AC104819.1-201ENST00000504587 486 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms