Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 KRT8P3-201ENST00000519669 1449 ntBASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 AL845331.1-201ENST00000424978 1190 ntBASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 HLA-F-220ENST00000434407 884 ntBASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 AL136038.4-201ENST00000603606 1261 ntBASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 AL157888.1-201ENST00000631930 593 ntBASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC187A0A096LP49 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC187A0A096LP49 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC187A0A096LP49 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC187A0A096LP49 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC187A0A096LP49 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CCDC187A0A096LP49 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC187A0A096LP49 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC187A0A096LP49 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC187A0A096LP49 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC187A0A096LP49 NUS1P1-201ENST00000446295 882 ntBASIC17.92■□□□□ 0.46
CCDC187A0A096LP49 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.92■□□□□ 0.46
CCDC187A0A096LP49 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.92■□□□□ 0.46
CCDC187A0A096LP49 MIR3917-201ENST00000580971 93 ntBASIC17.92■□□□□ 0.46
CCDC187A0A096LP49 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
CCDC187A0A096LP49 AC079602.3-201ENST00000623931 403 ntBASIC17.92■□□□□ 0.46
CCDC187A0A096LP49 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CCDC187A0A096LP49 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.92■□□□□ 0.46
CCDC187A0A096LP49 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC187A0A096LP49 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC187A0A096LP49 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC187A0A096LP49 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC187A0A096LP49 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC187A0A096LP49 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC187A0A096LP49 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CCDC187A0A096LP49 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC187A0A096LP49 AC092667.1-201ENST00000434301 2586 ntBASIC17.91■□□□□ 0.46
CCDC187A0A096LP49 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CCDC187A0A096LP49 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC187A0A096LP49 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC187A0A096LP49 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC187A0A096LP49 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC187A0A096LP49 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC187A0A096LP49 FDX1P1-201ENST00000449115 551 ntBASIC17.91■□□□□ 0.46
CCDC187A0A096LP49 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.91■□□□□ 0.46
CCDC187A0A096LP49 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC187A0A096LP49 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.91■□□□□ 0.46
CCDC187A0A096LP49 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC187A0A096LP49 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC187A0A096LP49 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC187A0A096LP49 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC187A0A096LP49 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC187A0A096LP49 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC187A0A096LP49 KRT18P1-202ENST00000452408 1331 ntBASIC17.91■□□□□ 0.46
CCDC187A0A096LP49 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC187A0A096LP49 AC073130.3-201ENST00000624389 2278 ntBASIC17.91■□□□□ 0.46
CCDC187A0A096LP49 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC187A0A096LP49 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC187A0A096LP49 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC187A0A096LP49 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC187A0A096LP49 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CCDC187A0A096LP49 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CCDC187A0A096LP49 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC187A0A096LP49 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC187A0A096LP49 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC187A0A096LP49 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CCDC187A0A096LP49 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC187A0A096LP49 LINC01006-201ENST00000333319 2292 ntBASIC17.9■□□□□ 0.46
CCDC187A0A096LP49 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC187A0A096LP49 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CCDC187A0A096LP49 MIR662-201ENST00000384847 95 ntBASIC17.9■□□□□ 0.46
CCDC187A0A096LP49 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.9■□□□□ 0.46
CCDC187A0A096LP49 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC187A0A096LP49 TSPY22P-201ENST00000427496 604 ntBASIC17.9■□□□□ 0.46
CCDC187A0A096LP49 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CCDC187A0A096LP49 KRT17P6-201ENST00000453795 1220 ntBASIC17.9■□□□□ 0.46
CCDC187A0A096LP49 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC187A0A096LP49 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.9■□□□□ 0.46
CCDC187A0A096LP49 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC187A0A096LP49 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC187A0A096LP49 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC187A0A096LP49 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC187A0A096LP49 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms