Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 RNU6-903P-201ENST00000391270 109 ntBASIC0.64□□□□□ -2.31
USH1CQ9Y6N9 RPS3AP1-201ENST00000413190 320 ntBASIC0.64□□□□□ -2.31
USH1CQ9Y6N9 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.64□□□□□ -2.31
USH1CQ9Y6N9 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.64□□□□□ -2.31
USH1CQ9Y6N9 AL031667.1-201ENST00000440222 725 ntBASIC0.64□□□□□ -2.31
USH1CQ9Y6N9 HMGB1P29-201ENST00000505659 499 ntBASIC0.64□□□□□ -2.31
USH1CQ9Y6N9 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.64□□□□□ -2.31
USH1CQ9Y6N9 AC092436.3-201ENST00000511788 257 ntBASIC0.64□□□□□ -2.31
USH1CQ9Y6N9 AC025465.4-201ENST00000513422 638 ntBASIC0.64□□□□□ -2.31
USH1CQ9Y6N9 RNU6-445P-201ENST00000516949 107 ntBASIC0.64□□□□□ -2.31
USH1CQ9Y6N9 AC025647.1-201ENST00000517879 253 ntBASIC0.64□□□□□ -2.31
USH1CQ9Y6N9 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.64□□□□□ -2.31
USH1CQ9Y6N9 SNRPGP20-201ENST00000604477 205 ntBASIC0.64□□□□□ -2.31
USH1CQ9Y6N9 AL360219.1-201ENST00000610230 366 ntBASIC0.64□□□□□ -2.31
USH1CQ9Y6N9 AC022960.3-201ENST00000619794 441 ntBASIC0.64□□□□□ -2.31
USH1CQ9Y6N9 AL513423.1-201ENST00000621695 132 ntBASIC0.64□□□□□ -2.31
USH1CQ9Y6N9 FGF7P2-201ENST00000332473 296 ntBASIC0.63□□□□□ -2.31
USH1CQ9Y6N9 RNU6-1240P-201ENST00000365155 104 ntBASIC0.63□□□□□ -2.31
USH1CQ9Y6N9 RNU6-1286P-201ENST00000383871 107 ntBASIC0.63□□□□□ -2.31
USH1CQ9Y6N9 MIR200A-201ENST00000384875 90 ntBASIC0.63□□□□□ -2.31
USH1CQ9Y6N9 MIR942-201ENST00000401111 86 ntBASIC0.63□□□□□ -2.31
USH1CQ9Y6N9 MRPL42P3-201ENST00000401492 326 ntBASIC0.63□□□□□ -2.31
USH1CQ9Y6N9 AL034345.1-201ENST00000407768 123 ntBASIC0.63□□□□□ -2.31
USH1CQ9Y6N9 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.63□□□□□ -2.31
USH1CQ9Y6N9 AC008134.1-201ENST00000420943 193 ntBASIC0.63□□□□□ -2.31
USH1CQ9Y6N9 MTND4LP16-201ENST00000440828 295 ntBASIC0.63□□□□□ -2.31
USH1CQ9Y6N9 AL356010.1-201ENST00000456364 102 ntBASIC0.63□□□□□ -2.31
USH1CQ9Y6N9 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.63□□□□□ -2.31
USH1CQ9Y6N9 TRBVA-201ENST00000498804 316 ntBASIC0.63□□□□□ -2.31
USH1CQ9Y6N9 MRPS36P4-201ENST00000534436 298 ntBASIC0.63□□□□□ -2.31
USH1CQ9Y6N9 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.63□□□□□ -2.31
USH1CQ9Y6N9 AC133485.1-201ENST00000567176 124 ntBASIC0.63□□□□□ -2.31
USH1CQ9Y6N9 AC138907.6-201ENST00000568401 126 ntBASIC0.63□□□□□ -2.31
USH1CQ9Y6N9 AC022432.1-201ENST00000595739 310 ntBASIC0.63□□□□□ -2.31
USH1CQ9Y6N9 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.63□□□□□ -2.31
USH1CQ9Y6N9 AC025449.1-201ENST00000603896 529 ntBASIC0.63□□□□□ -2.31
USH1CQ9Y6N9 AC008536.2-201ENST00000607284 349 ntBASIC0.63□□□□□ -2.31
USH1CQ9Y6N9 AC024933.1-201ENST00000608472 348 ntBASIC0.63□□□□□ -2.31
USH1CQ9Y6N9 RMST_3.1-201ENST00000611651 109 ntBASIC0.63□□□□□ -2.31
USH1CQ9Y6N9 AC122133.1-201ENST00000613964 233 ntBASIC0.63□□□□□ -2.31
USH1CQ9Y6N9 AC139792.3-201ENST00000623525 224 ntBASIC0.63□□□□□ -2.31
USH1CQ9Y6N9 AF246928.1-201ENST00000623768 87 ntBASIC0.63□□□□□ -2.31
USH1CQ9Y6N9 Y_RNA.159-201ENST00000363674 87 ntBASIC0.62□□□□□ -2.31
USH1CQ9Y6N9 Y_RNA.363-201ENST00000365529 113 ntBASIC0.62□□□□□ -2.31
USH1CQ9Y6N9 SNORA67.2-201ENST00000384300 149 ntBASIC0.62□□□□□ -2.31
USH1CQ9Y6N9 RNU6-342P-201ENST00000384521 104 ntBASIC0.62□□□□□ -2.31
USH1CQ9Y6N9 MIR92A1-201ENST00000385233 78 ntBASIC0.62□□□□□ -2.31
USH1CQ9Y6N9 SNORA12.1-201ENST00000390873 148 ntBASIC0.62□□□□□ -2.31
USH1CQ9Y6N9 RNU6-1186P-201ENST00000410429 97 ntBASIC0.62□□□□□ -2.31
USH1CQ9Y6N9 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.62□□□□□ -2.31
USH1CQ9Y6N9 RNU7-180P-201ENST00000459240 63 ntBASIC0.62□□□□□ -2.31
USH1CQ9Y6N9 AC007215.1-201ENST00000464893 276 ntBASIC0.62□□□□□ -2.31
USH1CQ9Y6N9 RNU1-117P-201ENST00000517041 158 ntBASIC0.62□□□□□ -2.31
USH1CQ9Y6N9 AC060788.1-201ENST00000521318 469 ntBASIC0.62□□□□□ -2.31
USH1CQ9Y6N9 MIR4778-201ENST00000577635 80 ntBASIC0.62□□□□□ -2.31
USH1CQ9Y6N9 MIR3915-201ENST00000578518 97 ntBASIC0.62□□□□□ -2.31
USH1CQ9Y6N9 AC073349.3-201ENST00000617616 186 ntBASIC0.62□□□□□ -2.31
USH1CQ9Y6N9 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.62□□□□□ -2.31
USH1CQ9Y6N9 MIR6835-201ENST00000621552 64 ntBASIC0.62□□□□□ -2.31
USH1CQ9Y6N9 AC068787.1-201ENST00000623908 691 ntBASIC0.62□□□□□ -2.31
USH1CQ9Y6N9 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.62□□□□□ -2.31
USH1CQ9Y6N9 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.62□□□□□ -2.31
USH1CQ9Y6N9 Y_RNA.123-201ENST00000363338 102 ntBASIC0.61□□□□□ -2.31
USH1CQ9Y6N9 MIR605-201ENST00000385078 83 ntBASIC0.61□□□□□ -2.31
USH1CQ9Y6N9 MIR660-201ENST00000385235 97 ntBASIC0.61□□□□□ -2.31
USH1CQ9Y6N9 AF228730.1-201ENST00000397972 663 ntBASIC0.61□□□□□ -2.31
USH1CQ9Y6N9 MIR320B2-201ENST00000408479 138 ntBASIC0.61□□□□□ -2.31
USH1CQ9Y6N9 RNU6-733P-201ENST00000410759 104 ntBASIC0.61□□□□□ -2.31
USH1CQ9Y6N9 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.61□□□□□ -2.31
USH1CQ9Y6N9 CDK8P2-201ENST00000415020 547 ntBASIC0.61□□□□□ -2.31
USH1CQ9Y6N9 MTND2P18-201ENST00000419962 1030 ntBASIC0.61□□□□□ -2.31
USH1CQ9Y6N9 MTCO2P11-201ENST00000431069 680 ntBASIC0.61□□□□□ -2.31
USH1CQ9Y6N9 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.61□□□□□ -2.31
USH1CQ9Y6N9 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.61□□□□□ -2.31
USH1CQ9Y6N9 U8.21-201ENST00000459536 136 ntBASIC0.61□□□□□ -2.31
USH1CQ9Y6N9 CCDC34P1-201ENST00000507441 517 ntBASIC0.61□□□□□ -2.31
USH1CQ9Y6N9 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.61□□□□□ -2.31
USH1CQ9Y6N9 HIF1AP1-201ENST00000553642 175 ntBASIC0.61□□□□□ -2.31
USH1CQ9Y6N9 SUB1P2-201ENST00000556401 297 ntBASIC0.61□□□□□ -2.31
USH1CQ9Y6N9 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.61□□□□□ -2.31
USH1CQ9Y6N9 MIR4424-201ENST00000585257 86 ntBASIC0.61□□□□□ -2.31
USH1CQ9Y6N9 AC080078.2-201ENST00000603766 501 ntBASIC0.61□□□□□ -2.31
USH1CQ9Y6N9 AL590095.2-201ENST00000604136 117 ntBASIC0.61□□□□□ -2.31
USH1CQ9Y6N9 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.61□□□□□ -2.31
USH1CQ9Y6N9 RNU1-133P-201ENST00000364867 167 ntBASIC0.6□□□□□ -2.31
USH1CQ9Y6N9 RNU6-517P-201ENST00000384362 110 ntBASIC0.6□□□□□ -2.31
USH1CQ9Y6N9 SNORA80D-201ENST00000384488 135 ntBASIC0.6□□□□□ -2.31
USH1CQ9Y6N9 SNORD41-201ENST00000386967 70 ntBASIC0.6□□□□□ -2.31
USH1CQ9Y6N9 AL355796.1-201ENST00000406706 323 ntBASIC0.6□□□□□ -2.31
USH1CQ9Y6N9 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.6□□□□□ -2.31
USH1CQ9Y6N9 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.6□□□□□ -2.31
USH1CQ9Y6N9 AL445305.1-201ENST00000432577 575 ntBASIC0.6□□□□□ -2.31
USH1CQ9Y6N9 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.6□□□□□ -2.31
USH1CQ9Y6N9 MTND4P32-201ENST00000437189 1237 ntBASIC0.6□□□□□ -2.31
USH1CQ9Y6N9 RNU6-221P-201ENST00000459541 99 ntBASIC0.6□□□□□ -2.31
USH1CQ9Y6N9 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.6□□□□□ -2.31
USH1CQ9Y6N9 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.6□□□□□ -2.31
USH1CQ9Y6N9 PVT1_3.1-201ENST00000620853 95 ntBASIC0.6□□□□□ -2.31
USH1CQ9Y6N9 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.6□□□□□ -2.31
USH1CQ9Y6N9 SCARNA4-201ENST00000629045 128 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 157.3 ms