Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
NR2E3Q9Y5X4 UBL5P4-201ENST00000562584 236 ntBASIC2.94□□□□□ -1.94
NR2E3Q9Y5X4 MIR1273D-201ENST00000577266 86 ntBASIC2.94□□□□□ -1.94
NR2E3Q9Y5X4 AL356280.1-201ENST00000603614 379 ntBASIC2.94□□□□□ -1.94
NR2E3Q9Y5X4 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
NR2E3Q9Y5X4 AC240442.1-201ENST00000616055 283 ntBASIC2.94□□□□□ -1.94
NR2E3Q9Y5X4 MIR5739-201ENST00000619803 80 ntBASIC2.94□□□□□ -1.94
NR2E3Q9Y5X4 AC090517.3-201ENST00000625170 141 ntBASIC2.94□□□□□ -1.94
NR2E3Q9Y5X4 BX322639.1-202ENST00000423987 2213 ntBASIC2.94□□□□□ -1.94
NR2E3Q9Y5X4 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.94□□□□□ -1.94
NR2E3Q9Y5X4 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
NR2E3Q9Y5X4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
NR2E3Q9Y5X4 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
NR2E3Q9Y5X4 AC010615.1-201ENST00000594254 1764 ntBASIC2.93□□□□□ -1.94
NR2E3Q9Y5X4 RNA5SP361-201ENST00000362686 118 ntBASIC2.93□□□□□ -1.94
NR2E3Q9Y5X4 VTRNA1-1-201ENST00000363120 99 ntBASIC2.93□□□□□ -1.94
NR2E3Q9Y5X4 RNU6-280P-201ENST00000364145 104 ntBASIC2.93□□□□□ -1.94
NR2E3Q9Y5X4 SNORD114-30-201ENST00000364448 72 ntBASIC2.93□□□□□ -1.94
NR2E3Q9Y5X4 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
NR2E3Q9Y5X4 RNU6-713P-201ENST00000384761 107 ntBASIC2.93□□□□□ -1.94
NR2E3Q9Y5X4 MIR627-201ENST00000384979 97 ntBASIC2.93□□□□□ -1.94
NR2E3Q9Y5X4 MIR320B2-201ENST00000408479 138 ntBASIC2.93□□□□□ -1.94
NR2E3Q9Y5X4 RNU2-38P-201ENST00000410856 79 ntBASIC2.93□□□□□ -1.94
NR2E3Q9Y5X4 AL451074.5-201ENST00000415894 435 ntBASIC2.93□□□□□ -1.94
NR2E3Q9Y5X4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.93□□□□□ -1.94
NR2E3Q9Y5X4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NR2E3Q9Y5X4 RNU6-1132P-201ENST00000459214 107 ntBASIC2.93□□□□□ -1.94
NR2E3Q9Y5X4 RNU6-1143P-201ENST00000516125 104 ntBASIC2.93□□□□□ -1.94
NR2E3Q9Y5X4 SNORA40.15-201ENST00000516884 107 ntBASIC2.93□□□□□ -1.94
NR2E3Q9Y5X4 RNU6-586P-201ENST00000517265 104 ntBASIC2.93□□□□□ -1.94
NR2E3Q9Y5X4 AC026470.2-201ENST00000561492 181 ntBASIC2.93□□□□□ -1.94
NR2E3Q9Y5X4 ZNF861P-201ENST00000588126 639 ntBASIC2.93□□□□□ -1.94
NR2E3Q9Y5X4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.93□□□□□ -1.94
NR2E3Q9Y5X4 AC011476.5-201ENST00000615594 130 ntBASIC2.93□□□□□ -1.94
NR2E3Q9Y5X4 AP001282.2-201ENST00000616149 309 ntBASIC2.93□□□□□ -1.94
NR2E3Q9Y5X4 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.93□□□□□ -1.94
NR2E3Q9Y5X4 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.93□□□□□ -1.94
NR2E3Q9Y5X4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
NR2E3Q9Y5X4 AC092593.1-201ENST00000515413 1815 ntBASIC2.92□□□□□ -1.94
NR2E3Q9Y5X4 Y_RNA.84-201ENST00000363011 104 ntBASIC2.92□□□□□ -1.94
NR2E3Q9Y5X4 Y_RNA.288-201ENST00000364854 92 ntBASIC2.92□□□□□ -1.94
NR2E3Q9Y5X4 RNU6-281P-201ENST00000384212 103 ntBASIC2.92□□□□□ -1.94
NR2E3Q9Y5X4 FO393413.1-201ENST00000402892 195 ntBASIC2.92□□□□□ -1.94
NR2E3Q9Y5X4 AC139712.2-201ENST00000424302 339 ntBASIC2.92□□□□□ -1.94
NR2E3Q9Y5X4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.92□□□□□ -1.94
NR2E3Q9Y5X4 Z96811.1-201ENST00000445880 108 ntBASIC2.92□□□□□ -1.94
NR2E3Q9Y5X4 RPL23AP42-201ENST00000471152 471 ntBASIC2.92□□□□□ -1.94
NR2E3Q9Y5X4 RPL26P26-201ENST00000480251 434 ntBASIC2.92□□□□□ -1.94
NR2E3Q9Y5X4 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.92□□□□□ -1.94
NR2E3Q9Y5X4 RNA5SP282-201ENST00000516355 108 ntBASIC2.92□□□□□ -1.94
NR2E3Q9Y5X4 RNU6-570P-201ENST00000517051 105 ntBASIC2.92□□□□□ -1.94
NR2E3Q9Y5X4 AC023824.2-201ENST00000566185 400 ntBASIC2.92□□□□□ -1.94
NR2E3Q9Y5X4 MIR4659A-201ENST00000580269 81 ntBASIC2.92□□□□□ -1.94
NR2E3Q9Y5X4 MIR4300-201ENST00000581016 96 ntBASIC2.92□□□□□ -1.94
NR2E3Q9Y5X4 SNRPGP20-201ENST00000604477 205 ntBASIC2.92□□□□□ -1.94
NR2E3Q9Y5X4 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.92□□□□□ -1.94
NR2E3Q9Y5X4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.92□□□□□ -1.94
NR2E3Q9Y5X4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
NR2E3Q9Y5X4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.91□□□□□ -1.94
NR2E3Q9Y5X4 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
NR2E3Q9Y5X4 Y_RNA.14-201ENST00000362415 103 ntBASIC2.91□□□□□ -1.94
NR2E3Q9Y5X4 Y_RNA.269-201ENST00000364685 89 ntBASIC2.91□□□□□ -1.94
NR2E3Q9Y5X4 RNU6-245P-201ENST00000384020 107 ntBASIC2.91□□□□□ -1.94
NR2E3Q9Y5X4 Y_RNA.476-201ENST00000384347 108 ntBASIC2.91□□□□□ -1.94
NR2E3Q9Y5X4 RNU6-220P-201ENST00000390919 107 ntBASIC2.91□□□□□ -1.94
NR2E3Q9Y5X4 MIR1302-6-201ENST00000408466 90 ntBASIC2.91□□□□□ -1.94
NR2E3Q9Y5X4 RNU6-1203P-201ENST00000410703 110 ntBASIC2.91□□□□□ -1.94
NR2E3Q9Y5X4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.91□□□□□ -1.94
NR2E3Q9Y5X4 WARS2P1-201ENST00000429678 537 ntBASIC2.91□□□□□ -1.94
NR2E3Q9Y5X4 CYP2C59P-201ENST00000457790 269 ntBASIC2.91□□□□□ -1.94
NR2E3Q9Y5X4 RN7SL636P-201ENST00000497504 294 ntBASIC2.91□□□□□ -1.94
NR2E3Q9Y5X4 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.91□□□□□ -1.94
NR2E3Q9Y5X4 MIR3117-201ENST00000584034 78 ntBASIC2.91□□□□□ -1.94
NR2E3Q9Y5X4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.91□□□□□ -1.94
NR2E3Q9Y5X4 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.91□□□□□ -1.94
NR2E3Q9Y5X4 AC005296.1-201ENST00000616145 209 ntBASIC2.91□□□□□ -1.94
NR2E3Q9Y5X4 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.91□□□□□ -1.94
NR2E3Q9Y5X4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.91□□□□□ -1.94
NR2E3Q9Y5X4 ZNF204P-201ENST00000416749 2397 ntBASIC2.91□□□□□ -1.94
NR2E3Q9Y5X4 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
NR2E3Q9Y5X4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
NR2E3Q9Y5X4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
NR2E3Q9Y5X4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
NR2E3Q9Y5X4 Y_RNA.143-201ENST00000363520 106 ntBASIC2.9□□□□□ -1.95
NR2E3Q9Y5X4 SNORD32B-201ENST00000364460 84 ntBASIC2.9□□□□□ -1.95
NR2E3Q9Y5X4 RNA5SP240-201ENST00000365355 128 ntBASIC2.9□□□□□ -1.95
NR2E3Q9Y5X4 Y_RNA.439-201ENST00000384119 94 ntBASIC2.9□□□□□ -1.95
NR2E3Q9Y5X4 RNU6-1274P-201ENST00000384557 107 ntBASIC2.9□□□□□ -1.95
NR2E3Q9Y5X4 MIR329-1-201ENST00000385028 80 ntBASIC2.9□□□□□ -1.95
NR2E3Q9Y5X4 MIR95-201ENST00000385072 81 ntBASIC2.9□□□□□ -1.95
NR2E3Q9Y5X4 Y_RNA.597-201ENST00000410463 100 ntBASIC2.9□□□□□ -1.95
NR2E3Q9Y5X4 HMGN2P35-201ENST00000412164 270 ntBASIC2.9□□□□□ -1.95
NR2E3Q9Y5X4 RPL23AP36-201ENST00000413895 458 ntBASIC2.9□□□□□ -1.95
NR2E3Q9Y5X4 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.9□□□□□ -1.95
NR2E3Q9Y5X4 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.9□□□□□ -1.95
NR2E3Q9Y5X4 AL445305.1-201ENST00000432577 575 ntBASIC2.9□□□□□ -1.95
NR2E3Q9Y5X4 AC112220.1-201ENST00000434628 355 ntBASIC2.9□□□□□ -1.95
NR2E3Q9Y5X4 HMGN2P23-201ENST00000456759 269 ntBASIC2.9□□□□□ -1.95
NR2E3Q9Y5X4 AC090515.1-201ENST00000465295 476 ntBASIC2.9□□□□□ -1.95
NR2E3Q9Y5X4 AC003982.1-202ENST00000469928 248 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 150.8 ms