Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.99□□□□□ -1.77
RTCBQ9Y3I0 AL139132.1-201ENST00000431587 344 ntBASIC3.99□□□□□ -1.77
RTCBQ9Y3I0 HMGN2P20-201ENST00000437531 273 ntBASIC3.99□□□□□ -1.77
RTCBQ9Y3I0 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.99□□□□□ -1.77
RTCBQ9Y3I0 AC010099.1-201ENST00000455434 375 ntBASIC3.99□□□□□ -1.77
RTCBQ9Y3I0 AC109810.1-201ENST00000534066 224 ntBASIC3.99□□□□□ -1.77
RTCBQ9Y3I0 ELOCP29-201ENST00000588193 334 ntBASIC3.99□□□□□ -1.77
RTCBQ9Y3I0 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.99□□□□□ -1.77
RTCBQ9Y3I0 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
RTCBQ9Y3I0 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.99□□□□□ -1.77
RTCBQ9Y3I0 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
RTCBQ9Y3I0 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.98□□□□□ -1.77
RTCBQ9Y3I0 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.98□□□□□ -1.77
RTCBQ9Y3I0 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
RTCBQ9Y3I0 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RTCBQ9Y3I0 RNU6-655P-201ENST00000362858 107 ntBASIC3.98□□□□□ -1.77
RTCBQ9Y3I0 RNU6-1210P-201ENST00000363775 107 ntBASIC3.98□□□□□ -1.77
RTCBQ9Y3I0 Y_RNA.341-201ENST00000365341 102 ntBASIC3.98□□□□□ -1.77
RTCBQ9Y3I0 RNU6-198P-201ENST00000384258 104 ntBASIC3.98□□□□□ -1.77
RTCBQ9Y3I0 MIR616-201ENST00000385293 97 ntBASIC3.98□□□□□ -1.77
RTCBQ9Y3I0 MTND4LP9-201ENST00000427694 174 ntBASIC3.98□□□□□ -1.77
RTCBQ9Y3I0 AL137159.1-201ENST00000452808 512 ntBASIC3.98□□□□□ -1.77
RTCBQ9Y3I0 RNU7-170P-201ENST00000459303 61 ntBASIC3.98□□□□□ -1.77
RTCBQ9Y3I0 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.98□□□□□ -1.77
RTCBQ9Y3I0 MIR3945-201ENST00000581853 98 ntBASIC3.98□□□□□ -1.77
RTCBQ9Y3I0 AC008873.1-201ENST00000625051 138 ntBASIC3.98□□□□□ -1.77
RTCBQ9Y3I0 U6.115-201ENST00000636045 103 ntBASIC3.98□□□□□ -1.77
RTCBQ9Y3I0 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RTCBQ9Y3I0 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RTCBQ9Y3I0 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
RTCBQ9Y3I0 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.97□□□□□ -1.77
RTCBQ9Y3I0 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
RTCBQ9Y3I0 Y_RNA.310-201ENST00000365063 113 ntBASIC3.97□□□□□ -1.77
RTCBQ9Y3I0 Y_RNA.337-201ENST00000365312 102 ntBASIC3.97□□□□□ -1.77
RTCBQ9Y3I0 SNORA67.2-201ENST00000384300 149 ntBASIC3.97□□□□□ -1.77
RTCBQ9Y3I0 Y_RNA.572-201ENST00000384757 98 ntBASIC3.97□□□□□ -1.77
RTCBQ9Y3I0 MIR526A2-201ENST00000390198 65 ntBASIC3.97□□□□□ -1.77
RTCBQ9Y3I0 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
RTCBQ9Y3I0 CENPBD1P1-201ENST00000464061 469 ntBASIC3.97□□□□□ -1.77
RTCBQ9Y3I0 SNRPGP3-201ENST00000469405 227 ntBASIC3.97□□□□□ -1.77
RTCBQ9Y3I0 SCARNA8-201ENST00000515924 131 ntBASIC3.97□□□□□ -1.77
RTCBQ9Y3I0 RNA5SP367-201ENST00000516557 118 ntBASIC3.97□□□□□ -1.77
RTCBQ9Y3I0 RNU6-1007P-201ENST00000516586 107 ntBASIC3.97□□□□□ -1.77
RTCBQ9Y3I0 AP000867.2-201ENST00000532468 320 ntBASIC3.97□□□□□ -1.77
RTCBQ9Y3I0 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.97□□□□□ -1.77
RTCBQ9Y3I0 MIR5688-201ENST00000580619 83 ntBASIC3.97□□□□□ -1.77
RTCBQ9Y3I0 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RTCBQ9Y3I0 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.97□□□□□ -1.77
RTCBQ9Y3I0 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RTCBQ9Y3I0 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
RTCBQ9Y3I0 AC026241.1-201ENST00000517873 2142 ntBASIC3.97□□□□□ -1.77
RTCBQ9Y3I0 AC069528.2-201ENST00000624849 1991 ntBASIC3.96□□□□□ -1.77
RTCBQ9Y3I0 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.96□□□□□ -1.78
RTCBQ9Y3I0 RNU6-199P-201ENST00000362954 107 ntBASIC3.96□□□□□ -1.78
RTCBQ9Y3I0 RNU6-1205P-201ENST00000363625 106 ntBASIC3.96□□□□□ -1.78
RTCBQ9Y3I0 Y_RNA.261-201ENST00000364631 102 ntBASIC3.96□□□□□ -1.78
RTCBQ9Y3I0 Y_RNA.361-201ENST00000365515 120 ntBASIC3.96□□□□□ -1.78
RTCBQ9Y3I0 RNU6-969P-201ENST00000383900 105 ntBASIC3.96□□□□□ -1.78
RTCBQ9Y3I0 RNU6-750P-201ENST00000390946 107 ntBASIC3.96□□□□□ -1.78
RTCBQ9Y3I0 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.96□□□□□ -1.78
RTCBQ9Y3I0 SNORA70.12-201ENST00000516084 153 ntBASIC3.96□□□□□ -1.78
RTCBQ9Y3I0 RNU6-453P-201ENST00000516819 85 ntBASIC3.96□□□□□ -1.78
RTCBQ9Y3I0 RNU6-971P-201ENST00000516920 106 ntBASIC3.96□□□□□ -1.78
RTCBQ9Y3I0 HSPE1P18-201ENST00000517602 280 ntBASIC3.96□□□□□ -1.78
RTCBQ9Y3I0 AL391813.1-201ENST00000603098 260 ntBASIC3.96□□□□□ -1.78
RTCBQ9Y3I0 AL138880.2-201ENST00000616214 239 ntBASIC3.96□□□□□ -1.78
RTCBQ9Y3I0 MIR3658-201ENST00000636291 56 ntBASIC3.96□□□□□ -1.78
RTCBQ9Y3I0 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
RTCBQ9Y3I0 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RTCBQ9Y3I0 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RTCBQ9Y3I0 AC002546.1-201ENST00000588041 2504 ntBASIC3.95□□□□□ -1.78
RTCBQ9Y3I0 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
RTCBQ9Y3I0 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RTCBQ9Y3I0 MIR22-201ENST00000362190 85 ntBASIC3.95□□□□□ -1.78
RTCBQ9Y3I0 Y_RNA.127-201ENST00000363386 109 ntBASIC3.95□□□□□ -1.78
RTCBQ9Y3I0 Y_RNA.273-201ENST00000364703 102 ntBASIC3.95□□□□□ -1.78
RTCBQ9Y3I0 RNU1-57P-201ENST00000384491 166 ntBASIC3.95□□□□□ -1.78
RTCBQ9Y3I0 SNORD20-201ENST00000384550 80 ntBASIC3.95□□□□□ -1.78
RTCBQ9Y3I0 CST9LP2-201ENST00000437612 320 ntBASIC3.95□□□□□ -1.78
RTCBQ9Y3I0 AL135938.1-201ENST00000443141 297 ntBASIC3.95□□□□□ -1.78
RTCBQ9Y3I0 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.95□□□□□ -1.78
RTCBQ9Y3I0 RNU7-141P-201ENST00000459304 62 ntBASIC3.95□□□□□ -1.78
RTCBQ9Y3I0 RPL23AP62-201ENST00000463396 453 ntBASIC3.95□□□□□ -1.78
RTCBQ9Y3I0 SRIP1-201ENST00000489235 288 ntBASIC3.95□□□□□ -1.78
RTCBQ9Y3I0 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.95□□□□□ -1.78
RTCBQ9Y3I0 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.95□□□□□ -1.78
RTCBQ9Y3I0 AL359881.1-201ENST00000602916 267 ntBASIC3.95□□□□□ -1.78
RTCBQ9Y3I0 AL391903.3-201ENST00000612158 163 ntBASIC3.95□□□□□ -1.78
RTCBQ9Y3I0 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RTCBQ9Y3I0 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RTCBQ9Y3I0 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.95□□□□□ -1.78
RTCBQ9Y3I0 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.95□□□□□ -1.78
RTCBQ9Y3I0 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
RTCBQ9Y3I0 AC010680.1-201ENST00000590024 3590 ntBASIC3.94□□□□□ -1.78
RTCBQ9Y3I0 AL136360.1-201ENST00000503377 1900 ntBASIC3.94□□□□□ -1.78
RTCBQ9Y3I0 MIR423-201ENST00000362201 94 ntBASIC3.94□□□□□ -1.78
RTCBQ9Y3I0 Y_RNA.353-201ENST00000365440 108 ntBASIC3.94□□□□□ -1.78
RTCBQ9Y3I0 MIR539-201ENST00000365690 78 ntBASIC3.94□□□□□ -1.78
RTCBQ9Y3I0 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.94□□□□□ -1.78
RTCBQ9Y3I0 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms