Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC007547.1-201ENST00000462177 490 ntBASIC-0.9□□□□□ -2.55
SCN11AQ9UI33 AC091135.1-201ENST00000585943 307 ntBASIC-0.9□□□□□ -2.55
SCN11AQ9UI33 AC174048.1-201ENST00000603389 144 ntBASIC-0.9□□□□□ -2.55
SCN11AQ9UI33 U6.108-201ENST00000637764 58 ntBASIC-0.9□□□□□ -2.55
SCN11AQ9UI33 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.9□□□□□ -2.55
SCN11AQ9UI33 RNU4-56P-201ENST00000364700 142 ntBASIC-0.91□□□□□ -2.55
SCN11AQ9UI33 RNY1P7-201ENST00000384743 110 ntBASIC-0.91□□□□□ -2.55
SCN11AQ9UI33 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.91□□□□□ -2.55
SCN11AQ9UI33 RPL21P38-201ENST00000418090 167 ntBASIC-0.91□□□□□ -2.55
SCN11AQ9UI33 AC106883.1-201ENST00000418805 562 ntBASIC-0.91□□□□□ -2.55
SCN11AQ9UI33 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-0.91□□□□□ -2.55
SCN11AQ9UI33 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC-0.91□□□□□ -2.55
SCN11AQ9UI33 AC023538.1-201ENST00000534576 736 ntBASIC-0.91□□□□□ -2.55
SCN11AQ9UI33 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC-0.91□□□□□ -2.55
SCN11AQ9UI33 AC023824.3-201ENST00000569003 562 ntBASIC-0.91□□□□□ -2.55
SCN11AQ9UI33 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.91□□□□□ -2.56
SCN11AQ9UI33 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.91□□□□□ -2.56
SCN11AQ9UI33 RNU6-819P-201ENST00000364116 107 ntBASIC-0.91□□□□□ -2.56
SCN11AQ9UI33 U8.5-201ENST00000364528 136 ntBASIC-0.91□□□□□ -2.56
SCN11AQ9UI33 MIR544A-201ENST00000384855 91 ntBASIC-0.91□□□□□ -2.56
SCN11AQ9UI33 RNU6-613P-201ENST00000410412 108 ntBASIC-0.91□□□□□ -2.56
SCN11AQ9UI33 Y_RNA.623-201ENST00000411128 95 ntBASIC-0.91□□□□□ -2.56
SCN11AQ9UI33 AC006366.1-201ENST00000422002 759 ntBASIC-0.91□□□□□ -2.56
SCN11AQ9UI33 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.91□□□□□ -2.56
SCN11AQ9UI33 RN7SKP164-201ENST00000516138 266 ntBASIC-0.91□□□□□ -2.56
SCN11AQ9UI33 SNORA18.7-201ENST00000516910 131 ntBASIC-0.91□□□□□ -2.56
SCN11AQ9UI33 MIR4432-201ENST00000581823 84 ntBASIC-0.91□□□□□ -2.56
SCN11AQ9UI33 AC110760.3-201ENST00000598794 467 ntBASIC-0.91□□□□□ -2.56
SCN11AQ9UI33 AC007684.1-201ENST00000609671 477 ntBASIC-0.91□□□□□ -2.56
SCN11AQ9UI33 AC106754.1-201ENST00000562632 1513 ntBASIC-0.91□□□□□ -2.56
SCN11AQ9UI33 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.92□□□□□ -2.56
SCN11AQ9UI33 RNU6-1207P-201ENST00000384343 107 ntBASIC-0.92□□□□□ -2.56
SCN11AQ9UI33 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.92□□□□□ -2.56
SCN11AQ9UI33 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.92□□□□□ -2.56
SCN11AQ9UI33 MIR300-201ENST00000401138 83 ntBASIC-0.92□□□□□ -2.56
SCN11AQ9UI33 MIR891A-201ENST00000401237 79 ntBASIC-0.92□□□□□ -2.56
SCN11AQ9UI33 RNU4-30P-201ENST00000410245 143 ntBASIC-0.92□□□□□ -2.56
SCN11AQ9UI33 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.92□□□□□ -2.56
SCN11AQ9UI33 SNORA27.4-201ENST00000516650 95 ntBASIC-0.92□□□□□ -2.56
SCN11AQ9UI33 RNU6-1315P-201ENST00000517187 99 ntBASIC-0.92□□□□□ -2.56
SCN11AQ9UI33 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.92□□□□□ -2.56
SCN11AQ9UI33 MIR4778-201ENST00000577635 80 ntBASIC-0.92□□□□□ -2.56
SCN11AQ9UI33 MIR3923-201ENST00000579521 83 ntBASIC-0.92□□□□□ -2.56
SCN11AQ9UI33 MIR4436A-201ENST00000585278 85 ntBASIC-0.92□□□□□ -2.56
SCN11AQ9UI33 AC012507.3-201ENST00000603556 477 ntBASIC-0.92□□□□□ -2.56
SCN11AQ9UI33 RNU6-216P-201ENST00000363282 104 ntBASIC-0.93□□□□□ -2.56
SCN11AQ9UI33 RNA5SP117-201ENST00000365294 118 ntBASIC-0.93□□□□□ -2.56
SCN11AQ9UI33 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.93□□□□□ -2.56
SCN11AQ9UI33 U8.16-201ENST00000391279 133 ntBASIC-0.93□□□□□ -2.56
SCN11AQ9UI33 CDK8P2-201ENST00000415020 547 ntBASIC-0.93□□□□□ -2.56
SCN11AQ9UI33 RPS24P1-201ENST00000438550 371 ntBASIC-0.93□□□□□ -2.56
SCN11AQ9UI33 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-0.93□□□□□ -2.56
SCN11AQ9UI33 snoU109.2-201ENST00000459316 135 ntBASIC-0.93□□□□□ -2.56
SCN11AQ9UI33 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.93□□□□□ -2.56
SCN11AQ9UI33 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.93□□□□□ -2.56
SCN11AQ9UI33 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.93□□□□□ -2.56
SCN11AQ9UI33 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.93□□□□□ -2.56
SCN11AQ9UI33 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.93□□□□□ -2.56
SCN11AQ9UI33 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.93□□□□□ -2.56
SCN11AQ9UI33 RNU6-1284P-201ENST00000363701 100 ntBASIC-0.93□□□□□ -2.56
SCN11AQ9UI33 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.93□□□□□ -2.56
SCN11AQ9UI33 MIR520C-201ENST00000385005 87 ntBASIC-0.93□□□□□ -2.56
SCN11AQ9UI33 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-0.93□□□□□ -2.56
SCN11AQ9UI33 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC-0.93□□□□□ -2.56
SCN11AQ9UI33 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.93□□□□□ -2.56
SCN11AQ9UI33 RNU6-885P-201ENST00000516607 104 ntBASIC-0.93□□□□□ -2.56
SCN11AQ9UI33 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.93□□□□□ -2.56
SCN11AQ9UI33 MIR548AD-201ENST00000584780 82 ntBASIC-0.93□□□□□ -2.56
SCN11AQ9UI33 VN1R87P-201ENST00000596706 487 ntBASIC-0.93□□□□□ -2.56
SCN11AQ9UI33 AC064872.1-201ENST00000604823 1072 ntBASIC-0.93□□□□□ -2.56
SCN11AQ9UI33 AC098679.4-201ENST00000624241 654 ntBASIC-0.93□□□□□ -2.56
SCN11AQ9UI33 RNU6-545P-201ENST00000362681 104 ntBASIC-0.94□□□□□ -2.56
SCN11AQ9UI33 RNU6-562P-201ENST00000362731 107 ntBASIC-0.94□□□□□ -2.56
SCN11AQ9UI33 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.94□□□□□ -2.56
SCN11AQ9UI33 MIR196A1-201ENST00000388006 70 ntBASIC-0.94□□□□□ -2.56
SCN11AQ9UI33 BX119904.4-201ENST00000424402 301 ntBASIC-0.94□□□□□ -2.56
SCN11AQ9UI33 TIMM9P3-201ENST00000428659 274 ntBASIC-0.94□□□□□ -2.56
SCN11AQ9UI33 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.94□□□□□ -2.56
SCN11AQ9UI33 MTND4P25-201ENST00000441039 533 ntBASIC-0.94□□□□□ -2.56
SCN11AQ9UI33 AC006026.2-201ENST00000457376 180 ntBASIC-0.94□□□□□ -2.56
SCN11AQ9UI33 AC091885.1-201ENST00000506658 268 ntBASIC-0.94□□□□□ -2.56
SCN11AQ9UI33 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.94□□□□□ -2.56
SCN11AQ9UI33 AC027288.2-201ENST00000553028 243 ntBASIC-0.94□□□□□ -2.56
SCN11AQ9UI33 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.94□□□□□ -2.56
SCN11AQ9UI33 MIR4320-201ENST00000636981 65 ntBASIC-0.94□□□□□ -2.56
SCN11AQ9UI33 SNORD114-11-201ENST00000363738 75 ntBASIC-0.95□□□□□ -2.56
SCN11AQ9UI33 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.95□□□□□ -2.56
SCN11AQ9UI33 MT-TN-201ENST00000387400 73 ntBASIC-0.95□□□□□ -2.56
SCN11AQ9UI33 POLR2KP2-201ENST00000438155 177 ntBASIC-0.95□□□□□ -2.56
SCN11AQ9UI33 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.95□□□□□ -2.56
SCN11AQ9UI33 AC079382.1-201ENST00000493346 557 ntBASIC-0.95□□□□□ -2.56
SCN11AQ9UI33 RNU7-129P-201ENST00000516128 62 ntBASIC-0.95□□□□□ -2.56
SCN11AQ9UI33 SNORA43.2-201ENST00000516652 128 ntBASIC-0.95□□□□□ -2.56
SCN11AQ9UI33 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.95□□□□□ -2.56
SCN11AQ9UI33 AL138889.2-201ENST00000603883 242 ntBASIC-0.95□□□□□ -2.56
SCN11AQ9UI33 MIR655-201ENST00000362159 97 ntBASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 SNORD56.1-201ENST00000362913 68 ntBASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 RNU6-1026P-201ENST00000384465 108 ntBASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 MIR1253-201ENST00000408273 105 ntBASIC-0.96□□□□□ -2.56
SCN11AQ9UI33 MIR1283-1-201ENST00000408494 87 ntBASIC-0.96□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms