Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AC007064.1-201ENST00000412238 351 ntBASIC2.78□□□□□ -1.96
DKK3Q9UBP4 AL390729.2-201ENST00000416137 156 ntBASIC2.78□□□□□ -1.96
DKK3Q9UBP4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.78□□□□□ -1.96
DKK3Q9UBP4 AL121594.1-201ENST00000475906 575 ntBASIC2.78□□□□□ -1.96
DKK3Q9UBP4 RPL36AP48-201ENST00000485521 314 ntBASIC2.78□□□□□ -1.96
DKK3Q9UBP4 AC074133.1-201ENST00000515696 183 ntBASIC2.78□□□□□ -1.96
DKK3Q9UBP4 SNORA40.9-201ENST00000515895 93 ntBASIC2.78□□□□□ -1.96
DKK3Q9UBP4 RNU6-1338P-201ENST00000516328 91 ntBASIC2.78□□□□□ -1.96
DKK3Q9UBP4 AC233702.2-202ENST00000562547 291 ntBASIC2.78□□□□□ -1.96
DKK3Q9UBP4 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.78□□□□□ -1.96
DKK3Q9UBP4 MIR3605-201ENST00000583214 100 ntBASIC2.78□□□□□ -1.96
DKK3Q9UBP4 ZNF861P-201ENST00000588126 639 ntBASIC2.78□□□□□ -1.96
DKK3Q9UBP4 SNRPGP20-201ENST00000604477 205 ntBASIC2.78□□□□□ -1.96
DKK3Q9UBP4 SNORD113-5-201ENST00000607261 78 ntBASIC2.78□□□□□ -1.96
DKK3Q9UBP4 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.78□□□□□ -1.96
DKK3Q9UBP4 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.78□□□□□ -1.96
DKK3Q9UBP4 PCGEM1.1-201ENST00000613431 131 ntBASIC2.78□□□□□ -1.96
DKK3Q9UBP4 AC127459.3-201ENST00000624328 466 ntBASIC2.78□□□□□ -1.96
DKK3Q9UBP4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
DKK3Q9UBP4 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
DKK3Q9UBP4 ZNF204P-201ENST00000416749 2397 ntBASIC2.77□□□□□ -1.97
DKK3Q9UBP4 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
DKK3Q9UBP4 RNU4-90P-201ENST00000362773 141 ntBASIC2.77□□□□□ -1.97
DKK3Q9UBP4 Y_RNA.60-201ENST00000362831 98 ntBASIC2.77□□□□□ -1.97
DKK3Q9UBP4 RNU6-655P-201ENST00000362858 107 ntBASIC2.77□□□□□ -1.97
DKK3Q9UBP4 Y_RNA.352-201ENST00000365439 102 ntBASIC2.77□□□□□ -1.97
DKK3Q9UBP4 Y_RNA.541-201ENST00000384640 113 ntBASIC2.77□□□□□ -1.97
DKK3Q9UBP4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.77□□□□□ -1.97
DKK3Q9UBP4 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.77□□□□□ -1.97
DKK3Q9UBP4 RPS29P6-201ENST00000438196 145 ntBASIC2.77□□□□□ -1.97
DKK3Q9UBP4 SEPT14P8-201ENST00000508026 178 ntBASIC2.77□□□□□ -1.97
DKK3Q9UBP4 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.77□□□□□ -1.97
DKK3Q9UBP4 SNORA25.14-201ENST00000516481 132 ntBASIC2.77□□□□□ -1.97
DKK3Q9UBP4 Y_RNA.683-201ENST00000516508 93 ntBASIC2.77□□□□□ -1.97
DKK3Q9UBP4 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.77□□□□□ -1.97
DKK3Q9UBP4 EIF4A1P12-201ENST00000551910 141 ntBASIC2.77□□□□□ -1.97
DKK3Q9UBP4 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.77□□□□□ -1.97
DKK3Q9UBP4 AL442067.1-201ENST00000613261 223 ntBASIC2.77□□□□□ -1.97
DKK3Q9UBP4 AC078938.1-201ENST00000620993 318 ntBASIC2.77□□□□□ -1.97
DKK3Q9UBP4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.77□□□□□ -1.97
DKK3Q9UBP4 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.76□□□□□ -1.97
DKK3Q9UBP4 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
DKK3Q9UBP4 AL359854.1-201ENST00000614203 1594 ntBASIC2.76□□□□□ -1.97
DKK3Q9UBP4 RNU6-626P-201ENST00000363354 107 ntBASIC2.76□□□□□ -1.97
DKK3Q9UBP4 Y_RNA.179-201ENST00000363844 90 ntBASIC2.76□□□□□ -1.97
DKK3Q9UBP4 RNU1-112P-201ENST00000364401 164 ntBASIC2.76□□□□□ -1.97
DKK3Q9UBP4 RNU6-793P-201ENST00000384233 104 ntBASIC2.76□□□□□ -1.97
DKK3Q9UBP4 RNU6-378P-201ENST00000384324 107 ntBASIC2.76□□□□□ -1.97
DKK3Q9UBP4 RNU2-20P-201ENST00000410425 191 ntBASIC2.76□□□□□ -1.97
DKK3Q9UBP4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.76□□□□□ -1.97
DKK3Q9UBP4 AC097463.2-201ENST00000421074 142 ntBASIC2.76□□□□□ -1.97
DKK3Q9UBP4 AC003685.2-201ENST00000422795 395 ntBASIC2.76□□□□□ -1.97
DKK3Q9UBP4 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.76□□□□□ -1.97
DKK3Q9UBP4 AC063976.3-201ENST00000426849 329 ntBASIC2.76□□□□□ -1.97
DKK3Q9UBP4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.76□□□□□ -1.97
DKK3Q9UBP4 snoU13.26-201ENST00000459452 105 ntBASIC2.76□□□□□ -1.97
DKK3Q9UBP4 AC112771.1-201ENST00000463581 102 ntBASIC2.76□□□□□ -1.97
DKK3Q9UBP4 AC003982.1-202ENST00000469928 248 ntBASIC2.76□□□□□ -1.97
DKK3Q9UBP4 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.76□□□□□ -1.97
DKK3Q9UBP4 AC107222.1-201ENST00000510899 637 ntBASIC2.76□□□□□ -1.97
DKK3Q9UBP4 SNORA9.3-201ENST00000516383 129 ntBASIC2.76□□□□□ -1.97
DKK3Q9UBP4 DEFB108E-201ENST00000524692 240 ntBASIC2.76□□□□□ -1.97
DKK3Q9UBP4 AC026470.2-201ENST00000561492 181 ntBASIC2.76□□□□□ -1.97
DKK3Q9UBP4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.76□□□□□ -1.97
DKK3Q9UBP4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.76□□□□□ -1.97
DKK3Q9UBP4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.76□□□□□ -1.97
DKK3Q9UBP4 AL356280.1-201ENST00000603614 379 ntBASIC2.76□□□□□ -1.97
DKK3Q9UBP4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.76□□□□□ -1.97
DKK3Q9UBP4 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
DKK3Q9UBP4 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
DKK3Q9UBP4 MTND5P35-201ENST00000557537 1720 ntBASIC2.76□□□□□ -1.97
DKK3Q9UBP4 AC062016.1-201ENST00000355719 319 ntBASIC2.75□□□□□ -1.97
DKK3Q9UBP4 U3.9-201ENST00000363823 204 ntBASIC2.75□□□□□ -1.97
DKK3Q9UBP4 RNU6-961P-201ENST00000363893 105 ntBASIC2.75□□□□□ -1.97
DKK3Q9UBP4 RNU6-290P-201ENST00000365212 101 ntBASIC2.75□□□□□ -1.97
DKK3Q9UBP4 Y_RNA.477-201ENST00000384352 108 ntBASIC2.75□□□□□ -1.97
DKK3Q9UBP4 Y_RNA.570-201ENST00000384750 101 ntBASIC2.75□□□□□ -1.97
DKK3Q9UBP4 AL512633.1-201ENST00000399931 655 ntBASIC2.75□□□□□ -1.97
DKK3Q9UBP4 Y_RNA.602-201ENST00000410535 92 ntBASIC2.75□□□□□ -1.97
DKK3Q9UBP4 AL445305.1-201ENST00000432577 575 ntBASIC2.75□□□□□ -1.97
DKK3Q9UBP4 CR769767.1-201ENST00000436337 346 ntBASIC2.75□□□□□ -1.97
DKK3Q9UBP4 Z98949.2-201ENST00000440996 144 ntBASIC2.75□□□□□ -1.97
DKK3Q9UBP4 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.75□□□□□ -1.97
DKK3Q9UBP4 HSPE1P25-201ENST00000455484 251 ntBASIC2.75□□□□□ -1.97
DKK3Q9UBP4 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.75□□□□□ -1.97
DKK3Q9UBP4 Y_RNA.673-201ENST00000516306 88 ntBASIC2.75□□□□□ -1.97
DKK3Q9UBP4 AC011373.1-201ENST00000607270 237 ntBASIC2.75□□□□□ -1.97
DKK3Q9UBP4 MIR6895-201ENST00000613497 78 ntBASIC2.75□□□□□ -1.97
DKK3Q9UBP4 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.75□□□□□ -1.97
DKK3Q9UBP4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.75□□□□□ -1.97
DKK3Q9UBP4 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
DKK3Q9UBP4 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
DKK3Q9UBP4 ZNF271P-202ENST00000465539 1970 ntBASIC2.74□□□□□ -1.97
DKK3Q9UBP4 RNU6-20P-201ENST00000384106 107 ntBASIC2.74□□□□□ -1.97
DKK3Q9UBP4 RNU6-102P-201ENST00000384485 104 ntBASIC2.74□□□□□ -1.97
DKK3Q9UBP4 Y_RNA.515-201ENST00000384535 112 ntBASIC2.74□□□□□ -1.97
DKK3Q9UBP4 MIR181A2-201ENST00000384863 110 ntBASIC2.74□□□□□ -1.97
DKK3Q9UBP4 AL590004.2-201ENST00000404787 371 ntBASIC2.74□□□□□ -1.97
DKK3Q9UBP4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.74□□□□□ -1.97
DKK3Q9UBP4 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 168.5 ms