Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 MIR1248-201ENST00000629190 106 ntBASIC2.64□□□□□ -1.99
COL20A1Q9P218 AC068205.3-201ENST00000636385 468 ntBASIC2.64□□□□□ -1.99
COL20A1Q9P218 U6.92-201ENST00000636464 89 ntBASIC2.64□□□□□ -1.99
COL20A1Q9P218 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
COL20A1Q9P218 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
COL20A1Q9P218 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.63□□□□□ -1.99
COL20A1Q9P218 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
COL20A1Q9P218 RNU6-708P-201ENST00000384217 107 ntBASIC2.63□□□□□ -1.99
COL20A1Q9P218 Y_RNA.471-201ENST00000384312 102 ntBASIC2.63□□□□□ -1.99
COL20A1Q9P218 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.63□□□□□ -1.99
COL20A1Q9P218 RNA5SP425-201ENST00000410336 112 ntBASIC2.63□□□□□ -1.99
COL20A1Q9P218 AC113618.1-201ENST00000416747 285 ntBASIC2.63□□□□□ -1.99
COL20A1Q9P218 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.63□□□□□ -1.99
COL20A1Q9P218 AL121890.1-201ENST00000435457 205 ntBASIC2.63□□□□□ -1.99
COL20A1Q9P218 RNA5SP490-201ENST00000517141 136 ntBASIC2.63□□□□□ -1.99
COL20A1Q9P218 RNU6-667P-201ENST00000517186 102 ntBASIC2.63□□□□□ -1.99
COL20A1Q9P218 RRN3P3-201ENST00000549207 578 ntBASIC2.63□□□□□ -1.99
COL20A1Q9P218 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.63□□□□□ -1.99
COL20A1Q9P218 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.63□□□□□ -1.99
COL20A1Q9P218 AC113195.1-201ENST00000579952 141 ntBASIC2.63□□□□□ -1.99
COL20A1Q9P218 MIR4753-201ENST00000585119 83 ntBASIC2.63□□□□□ -1.99
COL20A1Q9P218 AC008737.2-201ENST00000599446 118 ntBASIC2.63□□□□□ -1.99
COL20A1Q9P218 AC136443.5-201ENST00000603741 370 ntBASIC2.63□□□□□ -1.99
COL20A1Q9P218 AC010205.1-201ENST00000616668 449 ntBASIC2.63□□□□□ -1.99
COL20A1Q9P218 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
COL20A1Q9P218 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.63□□□□□ -1.99
COL20A1Q9P218 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
COL20A1Q9P218 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
COL20A1Q9P218 RNU6-450P-201ENST00000364654 107 ntBASIC2.62□□□□□ -1.99
COL20A1Q9P218 MIR586-201ENST00000385035 97 ntBASIC2.62□□□□□ -1.99
COL20A1Q9P218 AC004866.1-201ENST00000411748 78 ntBASIC2.62□□□□□ -1.99
COL20A1Q9P218 HMGN2P18-201ENST00000450680 270 ntBASIC2.62□□□□□ -1.99
COL20A1Q9P218 AC010469.2-201ENST00000496412 480 ntBASIC2.62□□□□□ -1.99
COL20A1Q9P218 RNU1-117P-201ENST00000517041 158 ntBASIC2.62□□□□□ -1.99
COL20A1Q9P218 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.62□□□□□ -1.99
COL20A1Q9P218 NDUFA5P6-201ENST00000542110 379 ntBASIC2.62□□□□□ -1.99
COL20A1Q9P218 AC233702.2-202ENST00000562547 291 ntBASIC2.62□□□□□ -1.99
COL20A1Q9P218 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.62□□□□□ -1.99
COL20A1Q9P218 MIR4659A-201ENST00000580269 81 ntBASIC2.62□□□□□ -1.99
COL20A1Q9P218 MIR3124-201ENST00000582636 67 ntBASIC2.62□□□□□ -1.99
COL20A1Q9P218 AL021879.1-201ENST00000611756 288 ntBASIC2.62□□□□□ -1.99
COL20A1Q9P218 AC008873.1-201ENST00000625051 138 ntBASIC2.62□□□□□ -1.99
COL20A1Q9P218 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
COL20A1Q9P218 RNU6-727P-201ENST00000363592 107 ntBASIC2.61□□□□□ -1.99
COL20A1Q9P218 RNU6-743P-201ENST00000364151 106 ntBASIC2.61□□□□□ -1.99
COL20A1Q9P218 Y_RNA.439-201ENST00000384119 94 ntBASIC2.61□□□□□ -1.99
COL20A1Q9P218 RNU6-1072P-201ENST00000384703 107 ntBASIC2.61□□□□□ -1.99
COL20A1Q9P218 RNU6-443P-201ENST00000384780 107 ntBASIC2.61□□□□□ -1.99
COL20A1Q9P218 MIR1283-1-201ENST00000408494 87 ntBASIC2.61□□□□□ -1.99
COL20A1Q9P218 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.61□□□□□ -1.99
COL20A1Q9P218 RNU2-48P-201ENST00000410694 191 ntBASIC2.61□□□□□ -1.99
COL20A1Q9P218 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.61□□□□□ -1.99
COL20A1Q9P218 AL356320.1-201ENST00000429616 163 ntBASIC2.61□□□□□ -1.99
COL20A1Q9P218 RPS12P2-201ENST00000439728 269 ntBASIC2.61□□□□□ -1.99
COL20A1Q9P218 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.61□□□□□ -1.99
COL20A1Q9P218 NDUFB4P10-201ENST00000452541 359 ntBASIC2.61□□□□□ -1.99
COL20A1Q9P218 AL137159.1-201ENST00000452808 512 ntBASIC2.61□□□□□ -1.99
COL20A1Q9P218 AC018868.1-201ENST00000491307 315 ntBASIC2.61□□□□□ -1.99
COL20A1Q9P218 YWHAEP4-201ENST00000505390 198 ntBASIC2.61□□□□□ -1.99
COL20A1Q9P218 SNORA40.9-201ENST00000515895 93 ntBASIC2.61□□□□□ -1.99
COL20A1Q9P218 AC004486.1-201ENST00000546846 233 ntBASIC2.61□□□□□ -1.99
COL20A1Q9P218 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.61□□□□□ -1.99
COL20A1Q9P218 AL162730.1-201ENST00000605734 292 ntBASIC2.61□□□□□ -1.99
COL20A1Q9P218 AC240442.1-201ENST00000616055 283 ntBASIC2.61□□□□□ -1.99
COL20A1Q9P218 AL078596.1-201ENST00000624856 447 ntBASIC2.61□□□□□ -1.99
COL20A1Q9P218 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
COL20A1Q9P218 U3.8-201ENST00000363675 217 ntBASIC2.6□□□□□ -1.99
COL20A1Q9P218 RNU6-1305P-201ENST00000364353 104 ntBASIC2.6□□□□□ -1.99
COL20A1Q9P218 RNU6-926P-201ENST00000384075 107 ntBASIC2.6□□□□□ -1.99
COL20A1Q9P218 Y_RNA.458-201ENST00000384240 102 ntBASIC2.6□□□□□ -1.99
COL20A1Q9P218 Y_RNA.498-201ENST00000384460 102 ntBASIC2.6□□□□□ -1.99
COL20A1Q9P218 HMGN2P35-201ENST00000412164 270 ntBASIC2.6□□□□□ -1.99
COL20A1Q9P218 SRIP3-201ENST00000413200 219 ntBASIC2.6□□□□□ -1.99
COL20A1Q9P218 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.6□□□□□ -1.99
COL20A1Q9P218 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.6□□□□□ -1.99
COL20A1Q9P218 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.6□□□□□ -1.99
COL20A1Q9P218 AC073910.1-201ENST00000445047 438 ntBASIC2.6□□□□□ -1.99
COL20A1Q9P218 AC067942.3-201ENST00000512025 362 ntBASIC2.6□□□□□ -1.99
COL20A1Q9P218 MIR1273D-201ENST00000577266 86 ntBASIC2.6□□□□□ -1.99
COL20A1Q9P218 MIR4648-201ENST00000580107 72 ntBASIC2.6□□□□□ -1.99
COL20A1Q9P218 MIR3670-2-201ENST00000582974 65 ntBASIC2.6□□□□□ -1.99
COL20A1Q9P218 MIR3670-1-201ENST00000584160 65 ntBASIC2.6□□□□□ -1.99
COL20A1Q9P218 MIR3670-3-201ENST00000584855 65 ntBASIC2.6□□□□□ -1.99
COL20A1Q9P218 MIR3670-4-201ENST00000612260 65 ntBASIC2.6□□□□□ -1.99
COL20A1Q9P218 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
COL20A1Q9P218 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
COL20A1Q9P218 SNORA25.6-201ENST00000364121 118 ntBASIC2.59□□□□□ -1.99
COL20A1Q9P218 Y_RNA.276-201ENST00000364732 109 ntBASIC2.59□□□□□ -1.99
COL20A1Q9P218 RNU1-51P-201ENST00000365345 176 ntBASIC2.59□□□□□ -1.99
COL20A1Q9P218 Y_RNA.415-201ENST00000384012 112 ntBASIC2.59□□□□□ -1.99
COL20A1Q9P218 RNU6-1310P-201ENST00000384153 107 ntBASIC2.59□□□□□ -1.99
COL20A1Q9P218 Y_RNA.459-201ENST00000384251 102 ntBASIC2.59□□□□□ -1.99
COL20A1Q9P218 SNORA67.2-201ENST00000384300 149 ntBASIC2.59□□□□□ -1.99
COL20A1Q9P218 AL079342.1-201ENST00000401460 267 ntBASIC2.59□□□□□ -1.99
COL20A1Q9P218 RN7SKP192-201ENST00000411291 327 ntBASIC2.59□□□□□ -1.99
COL20A1Q9P218 AL135786.1-201ENST00000415892 214 ntBASIC2.59□□□□□ -1.99
COL20A1Q9P218 DPH3P2-201ENST00000422618 250 ntBASIC2.59□□□□□ -1.99
COL20A1Q9P218 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.59□□□□□ -1.99
COL20A1Q9P218 RPEP5-201ENST00000441137 268 ntBASIC2.59□□□□□ -1.99
COL20A1Q9P218 AC016925.1-201ENST00000458303 298 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms