Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
HCN3Q9P1Z3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HCN3Q9P1Z3 RNU1-58P-201ENST00000362413 163 ntBASIC2.19□□□□□ -2.06
HCN3Q9P1Z3 Y_RNA.197-201ENST00000364004 102 ntBASIC2.19□□□□□ -2.06
HCN3Q9P1Z3 RNA5SP213-201ENST00000391031 106 ntBASIC2.19□□□□□ -2.06
HCN3Q9P1Z3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.19□□□□□ -2.06
HCN3Q9P1Z3 MTND4P28-201ENST00000426217 387 ntBASIC2.19□□□□□ -2.06
HCN3Q9P1Z3 RNU7-57P-201ENST00000459540 60 ntBASIC2.19□□□□□ -2.06
HCN3Q9P1Z3 RNU6-948P-201ENST00000516374 107 ntBASIC2.19□□□□□ -2.06
HCN3Q9P1Z3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.19□□□□□ -2.06
HCN3Q9P1Z3 AC007229.1-201ENST00000590455 412 ntBASIC2.19□□□□□ -2.06
HCN3Q9P1Z3 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.19□□□□□ -2.06
HCN3Q9P1Z3 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.19□□□□□ -2.06
HCN3Q9P1Z3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HCN3Q9P1Z3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
HCN3Q9P1Z3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
HCN3Q9P1Z3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.19□□□□□ -2.06
HCN3Q9P1Z3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
HCN3Q9P1Z3 RNA5SP493-201ENST00000364115 91 ntBASIC2.18□□□□□ -2.06
HCN3Q9P1Z3 RNU6-975P-201ENST00000384296 105 ntBASIC2.18□□□□□ -2.06
HCN3Q9P1Z3 SNORA67.2-201ENST00000384300 149 ntBASIC2.18□□□□□ -2.06
HCN3Q9P1Z3 MIR329-1-201ENST00000385028 80 ntBASIC2.18□□□□□ -2.06
HCN3Q9P1Z3 RNA5SP504-201ENST00000410676 117 ntBASIC2.18□□□□□ -2.06
HCN3Q9P1Z3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.18□□□□□ -2.06
HCN3Q9P1Z3 HMGN2P3-201ENST00000433603 273 ntBASIC2.18□□□□□ -2.06
HCN3Q9P1Z3 HMGN2P5-201ENST00000436882 273 ntBASIC2.18□□□□□ -2.06
HCN3Q9P1Z3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.18□□□□□ -2.06
HCN3Q9P1Z3 MTCO1P44-201ENST00000441935 243 ntBASIC2.18□□□□□ -2.06
HCN3Q9P1Z3 UQCRBP2-201ENST00000447827 297 ntBASIC2.18□□□□□ -2.06
HCN3Q9P1Z3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.18□□□□□ -2.06
HCN3Q9P1Z3 MIR2355-201ENST00000517199 87 ntBASIC2.18□□□□□ -2.06
HCN3Q9P1Z3 AC092447.9-201ENST00000603395 144 ntBASIC2.18□□□□□ -2.06
HCN3Q9P1Z3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.18□□□□□ -2.06
HCN3Q9P1Z3 U2.1-201ENST00000618978 145 ntBASIC2.18□□□□□ -2.06
HCN3Q9P1Z3 AL162373.1-201ENST00000620433 407 ntBASIC2.18□□□□□ -2.06
HCN3Q9P1Z3 ZNF72P-201ENST00000425869 1908 ntBASIC2.18□□□□□ -2.06
HCN3Q9P1Z3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.18□□□□□ -2.06
HCN3Q9P1Z3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
HCN3Q9P1Z3 AL159152.1-201ENST00000635019 2587 ntBASIC2.17□□□□□ -2.06
HCN3Q9P1Z3 MIR340-201ENST00000362125 95 ntBASIC2.17□□□□□ -2.06
HCN3Q9P1Z3 Y_RNA.5-201ENST00000362334 102 ntBASIC2.17□□□□□ -2.06
HCN3Q9P1Z3 RNU4-42P-201ENST00000364738 142 ntBASIC2.17□□□□□ -2.06
HCN3Q9P1Z3 RNU6-57P-201ENST00000411348 103 ntBASIC2.17□□□□□ -2.06
HCN3Q9P1Z3 AL357134.1-201ENST00000445848 426 ntBASIC2.17□□□□□ -2.06
HCN3Q9P1Z3 RNU2-19P-201ENST00000517288 84 ntBASIC2.17□□□□□ -2.06
HCN3Q9P1Z3 IGLV3-17-201ENST00000519099 244 ntBASIC2.17□□□□□ -2.06
HCN3Q9P1Z3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.17□□□□□ -2.06
HCN3Q9P1Z3 AC087441.2-201ENST00000529141 262 ntBASIC2.17□□□□□ -2.06
HCN3Q9P1Z3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.17□□□□□ -2.06
HCN3Q9P1Z3 AC006600.1-201ENST00000572529 153 ntBASIC2.17□□□□□ -2.06
HCN3Q9P1Z3 AC006157.1-201ENST00000611750 366 ntBASIC2.17□□□□□ -2.06
HCN3Q9P1Z3 AC083806.3-201ENST00000614016 455 ntBASIC2.17□□□□□ -2.06
HCN3Q9P1Z3 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.17□□□□□ -2.06
HCN3Q9P1Z3 AC064859.1-201ENST00000624741 174 ntBASIC2.17□□□□□ -2.06
HCN3Q9P1Z3 AC008873.1-201ENST00000625051 138 ntBASIC2.17□□□□□ -2.06
HCN3Q9P1Z3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
HCN3Q9P1Z3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
HCN3Q9P1Z3 RNU6-1301P-201ENST00000362724 104 ntBASIC2.16□□□□□ -2.06
HCN3Q9P1Z3 RNU6-318P-201ENST00000384283 103 ntBASIC2.16□□□□□ -2.06
HCN3Q9P1Z3 MIR548B-201ENST00000385247 97 ntBASIC2.16□□□□□ -2.06
HCN3Q9P1Z3 MIR1283-2-201ENST00000408621 87 ntBASIC2.16□□□□□ -2.06
HCN3Q9P1Z3 AC055731.1-201ENST00000474387 401 ntBASIC2.16□□□□□ -2.06
HCN3Q9P1Z3 MIR5007-201ENST00000583098 95 ntBASIC2.16□□□□□ -2.06
HCN3Q9P1Z3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.16□□□□□ -2.06
HCN3Q9P1Z3 MIR6895-201ENST00000613497 78 ntBASIC2.16□□□□□ -2.06
HCN3Q9P1Z3 AC007336.1-201ENST00000576365 3828 ntBASIC2.16□□□□□ -2.06
HCN3Q9P1Z3 Y_RNA.39-201ENST00000362620 98 ntBASIC2.15□□□□□ -2.07
HCN3Q9P1Z3 Y_RNA.252-201ENST00000364556 101 ntBASIC2.15□□□□□ -2.07
HCN3Q9P1Z3 RNU6-926P-201ENST00000384075 107 ntBASIC2.15□□□□□ -2.07
HCN3Q9P1Z3 Y_RNA.445-201ENST00000384168 102 ntBASIC2.15□□□□□ -2.07
HCN3Q9P1Z3 RNU6-1145P-201ENST00000384246 107 ntBASIC2.15□□□□□ -2.07
HCN3Q9P1Z3 Y_RNA.496-201ENST00000384444 101 ntBASIC2.15□□□□□ -2.07
HCN3Q9P1Z3 RNA5SP465-201ENST00000391195 109 ntBASIC2.15□□□□□ -2.07
HCN3Q9P1Z3 SNORA3.2-201ENST00000408221 125 ntBASIC2.15□□□□□ -2.07
HCN3Q9P1Z3 SNORD12B-201ENST00000410433 91 ntBASIC2.15□□□□□ -2.07
HCN3Q9P1Z3 RPS20P15-201ENST00000412792 311 ntBASIC2.15□□□□□ -2.07
HCN3Q9P1Z3 AL356320.1-201ENST00000429616 163 ntBASIC2.15□□□□□ -2.07
HCN3Q9P1Z3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.15□□□□□ -2.07
HCN3Q9P1Z3 PCNPP5-201ENST00000452246 481 ntBASIC2.15□□□□□ -2.07
HCN3Q9P1Z3 RNU1-131P-201ENST00000458943 161 ntBASIC2.15□□□□□ -2.07
HCN3Q9P1Z3 AC067942.3-201ENST00000512025 362 ntBASIC2.15□□□□□ -2.07
HCN3Q9P1Z3 RNU2-34P-201ENST00000516534 121 ntBASIC2.15□□□□□ -2.07
HCN3Q9P1Z3 RN7SKP49-201ENST00000516675 260 ntBASIC2.15□□□□□ -2.07
HCN3Q9P1Z3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
HCN3Q9P1Z3 MIR3169-201ENST00000578032 83 ntBASIC2.15□□□□□ -2.07
HCN3Q9P1Z3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.15□□□□□ -2.07
HCN3Q9P1Z3 AC078899.2-201ENST00000595282 212 ntBASIC2.15□□□□□ -2.07
HCN3Q9P1Z3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.15□□□□□ -2.07
HCN3Q9P1Z3 AL357075.2-201ENST00000614906 189 ntBASIC2.15□□□□□ -2.07
HCN3Q9P1Z3 AC006001.4-201ENST00000622243 395 ntBASIC2.15□□□□□ -2.07
HCN3Q9P1Z3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
HCN3Q9P1Z3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
HCN3Q9P1Z3 RNA5SP276-201ENST00000362580 94 ntBASIC2.14□□□□□ -2.07
HCN3Q9P1Z3 U8.2-201ENST00000363156 134 ntBASIC2.14□□□□□ -2.07
HCN3Q9P1Z3 U3.8-201ENST00000363675 217 ntBASIC2.14□□□□□ -2.07
HCN3Q9P1Z3 SNORA16B-201ENST00000364674 135 ntBASIC2.14□□□□□ -2.07
HCN3Q9P1Z3 Y_RNA.394-201ENST00000383942 103 ntBASIC2.14□□□□□ -2.07
HCN3Q9P1Z3 RNU6-1235P-201ENST00000384559 107 ntBASIC2.14□□□□□ -2.07
HCN3Q9P1Z3 RNU6-308P-201ENST00000390957 107 ntBASIC2.14□□□□□ -2.07
HCN3Q9P1Z3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms