Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
NCKIPSDQ9NZQ3 AC135776.4-201ENST00000624300 1904 ntBASIC2.5□□□□□ -2.01
NCKIPSDQ9NZQ3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
NCKIPSDQ9NZQ3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.5□□□□□ -2.01
NCKIPSDQ9NZQ3 SNORD115-8-201ENST00000363856 82 ntBASIC2.5□□□□□ -2.01
NCKIPSDQ9NZQ3 SNORA38-201ENST00000363946 132 ntBASIC2.5□□□□□ -2.01
NCKIPSDQ9NZQ3 SNORD115-38-201ENST00000365037 82 ntBASIC2.5□□□□□ -2.01
NCKIPSDQ9NZQ3 Y_RNA.376-201ENST00000365638 108 ntBASIC2.5□□□□□ -2.01
NCKIPSDQ9NZQ3 Y_RNA.458-201ENST00000384240 102 ntBASIC2.5□□□□□ -2.01
NCKIPSDQ9NZQ3 Y_RNA.518-201ENST00000384552 113 ntBASIC2.5□□□□□ -2.01
NCKIPSDQ9NZQ3 MIR1261-201ENST00000408659 82 ntBASIC2.5□□□□□ -2.01
NCKIPSDQ9NZQ3 RNU6-121P-201ENST00000410525 99 ntBASIC2.5□□□□□ -2.01
NCKIPSDQ9NZQ3 RPS26P42-201ENST00000413485 326 ntBASIC2.5□□□□□ -2.01
NCKIPSDQ9NZQ3 AC003685.2-201ENST00000422795 395 ntBASIC2.5□□□□□ -2.01
NCKIPSDQ9NZQ3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.5□□□□□ -2.01
NCKIPSDQ9NZQ3 SUMO1P4-201ENST00000429430 302 ntBASIC2.5□□□□□ -2.01
NCKIPSDQ9NZQ3 AC096638.1-201ENST00000444678 216 ntBASIC2.5□□□□□ -2.01
NCKIPSDQ9NZQ3 UBL5P3-201ENST00000475112 231 ntBASIC2.5□□□□□ -2.01
NCKIPSDQ9NZQ3 AC025465.3-201ENST00000510570 311 ntBASIC2.5□□□□□ -2.01
NCKIPSDQ9NZQ3 AC067942.3-201ENST00000512025 362 ntBASIC2.5□□□□□ -2.01
NCKIPSDQ9NZQ3 RNU6-1114P-201ENST00000516022 107 ntBASIC2.5□□□□□ -2.01
NCKIPSDQ9NZQ3 RNU6-567P-201ENST00000516746 107 ntBASIC2.5□□□□□ -2.01
NCKIPSDQ9NZQ3 RNU6-58P-201ENST00000517143 103 ntBASIC2.5□□□□□ -2.01
NCKIPSDQ9NZQ3 AC022868.1-201ENST00000517767 391 ntBASIC2.5□□□□□ -2.01
NCKIPSDQ9NZQ3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.5□□□□□ -2.01
NCKIPSDQ9NZQ3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
NCKIPSDQ9NZQ3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
NCKIPSDQ9NZQ3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NCKIPSDQ9NZQ3 Y_RNA.64-201ENST00000362845 102 ntBASIC2.49□□□□□ -2.01
NCKIPSDQ9NZQ3 RNA5SP393-201ENST00000363423 117 ntBASIC2.49□□□□□ -2.01
NCKIPSDQ9NZQ3 SNORA80E-201ENST00000384744 137 ntBASIC2.49□□□□□ -2.01
NCKIPSDQ9NZQ3 MT-TW-201ENST00000387382 68 ntBASIC2.49□□□□□ -2.01
NCKIPSDQ9NZQ3 MT-TR-201ENST00000387439 65 ntBASIC2.49□□□□□ -2.01
NCKIPSDQ9NZQ3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
NCKIPSDQ9NZQ3 RNU6-159P-201ENST00000391080 106 ntBASIC2.49□□□□□ -2.01
NCKIPSDQ9NZQ3 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.49□□□□□ -2.01
NCKIPSDQ9NZQ3 AC139712.2-201ENST00000424302 339 ntBASIC2.49□□□□□ -2.01
NCKIPSDQ9NZQ3 YWHAEP4-201ENST00000505390 198 ntBASIC2.49□□□□□ -2.01
NCKIPSDQ9NZQ3 RNU6-1012P-201ENST00000516606 109 ntBASIC2.49□□□□□ -2.01
NCKIPSDQ9NZQ3 AP003733.2-201ENST00000529409 171 ntBASIC2.49□□□□□ -2.01
NCKIPSDQ9NZQ3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.49□□□□□ -2.01
NCKIPSDQ9NZQ3 MIR3923-201ENST00000579521 83 ntBASIC2.49□□□□□ -2.01
NCKIPSDQ9NZQ3 AC141273.2-201ENST00000618989 130 ntBASIC2.49□□□□□ -2.01
NCKIPSDQ9NZQ3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NCKIPSDQ9NZQ3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
NCKIPSDQ9NZQ3 AC069528.2-201ENST00000624849 1991 ntBASIC2.49□□□□□ -2.01
NCKIPSDQ9NZQ3 Y_RNA.14-201ENST00000362415 103 ntBASIC2.48□□□□□ -2.01
NCKIPSDQ9NZQ3 RNU4-15P-201ENST00000362613 141 ntBASIC2.48□□□□□ -2.01
NCKIPSDQ9NZQ3 Y_RNA.478-201ENST00000384358 107 ntBASIC2.48□□□□□ -2.01
NCKIPSDQ9NZQ3 Y_RNA.483-201ENST00000384380 101 ntBASIC2.48□□□□□ -2.01
NCKIPSDQ9NZQ3 RNU6-1274P-201ENST00000384557 107 ntBASIC2.48□□□□□ -2.01
NCKIPSDQ9NZQ3 Y_RNA.562-201ENST00000384695 113 ntBASIC2.48□□□□□ -2.01
NCKIPSDQ9NZQ3 RNA5SP201-201ENST00000410316 124 ntBASIC2.48□□□□□ -2.01
NCKIPSDQ9NZQ3 RNA5SP425-201ENST00000410336 112 ntBASIC2.48□□□□□ -2.01
NCKIPSDQ9NZQ3 RNU6-1001P-201ENST00000411265 100 ntBASIC2.48□□□□□ -2.01
NCKIPSDQ9NZQ3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.48□□□□□ -2.01
NCKIPSDQ9NZQ3 SDAD1P3-201ENST00000427380 333 ntBASIC2.48□□□□□ -2.01
NCKIPSDQ9NZQ3 WARS2P1-201ENST00000429678 537 ntBASIC2.48□□□□□ -2.01
NCKIPSDQ9NZQ3 LINC01399-202ENST00000458450 244 ntBASIC2.48□□□□□ -2.01
NCKIPSDQ9NZQ3 RPL39P38-201ENST00000467018 153 ntBASIC2.48□□□□□ -2.01
NCKIPSDQ9NZQ3 AC145146.1-201ENST00000496370 254 ntBASIC2.48□□□□□ -2.01
NCKIPSDQ9NZQ3 AC107222.1-201ENST00000510899 637 ntBASIC2.48□□□□□ -2.01
NCKIPSDQ9NZQ3 RNU6-1023P-201ENST00000516137 106 ntBASIC2.48□□□□□ -2.01
NCKIPSDQ9NZQ3 AC011476.5-201ENST00000615594 130 ntBASIC2.48□□□□□ -2.01
NCKIPSDQ9NZQ3 ZNF658B-202ENST00000615961 3375 ntBASIC2.47□□□□□ -2.01
NCKIPSDQ9NZQ3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
NCKIPSDQ9NZQ3 U8.2-201ENST00000363156 134 ntBASIC2.47□□□□□ -2.01
NCKIPSDQ9NZQ3 RNA5SP456-201ENST00000364002 114 ntBASIC2.47□□□□□ -2.01
NCKIPSDQ9NZQ3 RNU6-281P-201ENST00000384212 103 ntBASIC2.47□□□□□ -2.01
NCKIPSDQ9NZQ3 RNU6-378P-201ENST00000384324 107 ntBASIC2.47□□□□□ -2.01
NCKIPSDQ9NZQ3 RNU6-1072P-201ENST00000384703 107 ntBASIC2.47□□□□□ -2.01
NCKIPSDQ9NZQ3 RNU6-443P-201ENST00000384780 107 ntBASIC2.47□□□□□ -2.01
NCKIPSDQ9NZQ3 AL356320.1-201ENST00000429616 163 ntBASIC2.47□□□□□ -2.01
NCKIPSDQ9NZQ3 TRBVB-201ENST00000477100 408 ntBASIC2.47□□□□□ -2.01
NCKIPSDQ9NZQ3 RNA5SP320-201ENST00000516263 124 ntBASIC2.47□□□□□ -2.01
NCKIPSDQ9NZQ3 CYP4A27P-201ENST00000567218 190 ntBASIC2.47□□□□□ -2.01
NCKIPSDQ9NZQ3 MIR5695-201ENST00000579717 85 ntBASIC2.47□□□□□ -2.01
NCKIPSDQ9NZQ3 AC005520.5-201ENST00000613926 164 ntBASIC2.47□□□□□ -2.01
NCKIPSDQ9NZQ3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.47□□□□□ -2.01
NCKIPSDQ9NZQ3 AC080100.1-201ENST00000624239 5356 ntBASIC2.46□□□□□ -2.01
NCKIPSDQ9NZQ3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
NCKIPSDQ9NZQ3 RNU6-873P-201ENST00000363833 107 ntBASIC2.46□□□□□ -2.02
NCKIPSDQ9NZQ3 SNORA20.1-201ENST00000364790 130 ntBASIC2.46□□□□□ -2.02
NCKIPSDQ9NZQ3 RNU6-1026P-201ENST00000384465 108 ntBASIC2.46□□□□□ -2.02
NCKIPSDQ9NZQ3 RNU6-1093P-201ENST00000391194 107 ntBASIC2.46□□□□□ -2.02
NCKIPSDQ9NZQ3 MIR208B-201ENST00000401172 77 ntBASIC2.46□□□□□ -2.02
NCKIPSDQ9NZQ3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
NCKIPSDQ9NZQ3 Y_RNA.597-201ENST00000410463 100 ntBASIC2.46□□□□□ -2.02
NCKIPSDQ9NZQ3 RNU4-53P-201ENST00000410828 140 ntBASIC2.46□□□□□ -2.02
NCKIPSDQ9NZQ3 RNU2-38P-201ENST00000410856 79 ntBASIC2.46□□□□□ -2.02
NCKIPSDQ9NZQ3 RPL21P38-201ENST00000418090 167 ntBASIC2.46□□□□□ -2.02
NCKIPSDQ9NZQ3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.46□□□□□ -2.02
NCKIPSDQ9NZQ3 AC096920.1-201ENST00000423991 241 ntBASIC2.46□□□□□ -2.02
NCKIPSDQ9NZQ3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.46□□□□□ -2.02
NCKIPSDQ9NZQ3 AC007215.1-201ENST00000464893 276 ntBASIC2.46□□□□□ -2.02
NCKIPSDQ9NZQ3 RNA5SP82-201ENST00000516707 92 ntBASIC2.46□□□□□ -2.02
NCKIPSDQ9NZQ3 SNORA48.11-201ENST00000517015 89 ntBASIC2.46□□□□□ -2.02
NCKIPSDQ9NZQ3 DEFB131C-201ENST00000528817 165 ntBASIC2.46□□□□□ -2.02
NCKIPSDQ9NZQ3 AC093023.1-201ENST00000547375 507 ntBASIC2.46□□□□□ -2.02
NCKIPSDQ9NZQ3 AC136932.1-201ENST00000574771 208 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms