Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 RMST_3.1-201ENST00000611651 109 ntBASIC1.18□□□□□ -2.22
KLHL28Q9NXS3 FER-210ENST00000628534 558 ntTSL 5 BASIC1.18□□□□□ -2.22
KLHL28Q9NXS3 AC121333.1-201ENST00000567488 2709 ntBASIC1.17□□□□□ -2.22
KLHL28Q9NXS3 AC091812.1-201ENST00000432235 1948 ntBASIC1.17□□□□□ -2.22
KLHL28Q9NXS3 snoU2-30.2-201ENST00000362805 70 ntBASIC1.17□□□□□ -2.22
KLHL28Q9NXS3 RNU6-451P-201ENST00000362921 107 ntBASIC1.17□□□□□ -2.22
KLHL28Q9NXS3 RNU6-1252P-201ENST00000363054 104 ntBASIC1.17□□□□□ -2.22
KLHL28Q9NXS3 Y_RNA.123-201ENST00000363338 102 ntBASIC1.17□□□□□ -2.22
KLHL28Q9NXS3 RNU6-254P-201ENST00000363377 107 ntBASIC1.17□□□□□ -2.22
KLHL28Q9NXS3 Y_RNA.318-201ENST00000365131 97 ntBASIC1.17□□□□□ -2.22
KLHL28Q9NXS3 Y_RNA.373-201ENST00000365600 103 ntBASIC1.17□□□□□ -2.22
KLHL28Q9NXS3 MIR450B-201ENST00000401182 78 ntBASIC1.17□□□□□ -2.22
KLHL28Q9NXS3 AL590002.1-201ENST00000406554 418 ntBASIC1.17□□□□□ -2.22
KLHL28Q9NXS3 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.17□□□□□ -2.22
KLHL28Q9NXS3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.17□□□□□ -2.22
KLHL28Q9NXS3 SEPT14P3-201ENST00000439401 183 ntBASIC1.17□□□□□ -2.22
KLHL28Q9NXS3 AL732372.2-207ENST00000445840 183 ntBASIC1.17□□□□□ -2.22
KLHL28Q9NXS3 AC016717.1-201ENST00000448918 286 ntBASIC1.17□□□□□ -2.22
KLHL28Q9NXS3 SEPT14P2-201ENST00000453405 183 ntBASIC1.17□□□□□ -2.22
KLHL28Q9NXS3 RPS29P29-201ENST00000456396 171 ntBASIC1.17□□□□□ -2.22
KLHL28Q9NXS3 SEPT14P4-201ENST00000513445 186 ntBASIC1.17□□□□□ -2.22
KLHL28Q9NXS3 RNU6-506P-201ENST00000516553 94 ntBASIC1.17□□□□□ -2.22
KLHL28Q9NXS3 RNU6-314P-201ENST00000516574 104 ntBASIC1.17□□□□□ -2.22
KLHL28Q9NXS3 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.17□□□□□ -2.22
KLHL28Q9NXS3 FO082796.1-201ENST00000523795 183 ntBASIC1.17□□□□□ -2.22
KLHL28Q9NXS3 AC068338.1-201ENST00000565567 176 ntBASIC1.17□□□□□ -2.22
KLHL28Q9NXS3 MIR4709-201ENST00000577272 72 ntBASIC1.17□□□□□ -2.22
KLHL28Q9NXS3 AL162413.1-201ENST00000603198 110 ntBASIC1.17□□□□□ -2.22
KLHL28Q9NXS3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.17□□□□□ -2.22
KLHL28Q9NXS3 AC099654.12-201ENST00000639868 649 ntBASIC1.17□□□□□ -2.22
KLHL28Q9NXS3 RNA5SP327-201ENST00000362494 101 ntBASIC1.16□□□□□ -2.22
KLHL28Q9NXS3 SNORA33-201ENST00000363664 130 ntBASIC1.16□□□□□ -2.22
KLHL28Q9NXS3 Y_RNA.256-201ENST00000364594 104 ntBASIC1.16□□□□□ -2.22
KLHL28Q9NXS3 RNU6-534P-201ENST00000364877 106 ntBASIC1.16□□□□□ -2.22
KLHL28Q9NXS3 SNORA4.2-201ENST00000365313 147 ntBASIC1.16□□□□□ -2.22
KLHL28Q9NXS3 RNU6-53P-201ENST00000365367 106 ntBASIC1.16□□□□□ -2.22
KLHL28Q9NXS3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
KLHL28Q9NXS3 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.16□□□□□ -2.22
KLHL28Q9NXS3 MTCO1P20-201ENST00000425366 358 ntBASIC1.16□□□□□ -2.22
KLHL28Q9NXS3 NFU1P2-201ENST00000448700 469 ntBASIC1.16□□□□□ -2.22
KLHL28Q9NXS3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.16□□□□□ -2.22
KLHL28Q9NXS3 RNU7-187P-201ENST00000458985 68 ntBASIC1.16□□□□□ -2.22
KLHL28Q9NXS3 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.16□□□□□ -2.22
KLHL28Q9NXS3 AP003033.1-201ENST00000527244 415 ntBASIC1.16□□□□□ -2.22
KLHL28Q9NXS3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.16□□□□□ -2.22
KLHL28Q9NXS3 CPDP1-201ENST00000579660 283 ntBASIC1.16□□□□□ -2.22
KLHL28Q9NXS3 FGF7P1-201ENST00000582820 288 ntBASIC1.16□□□□□ -2.22
KLHL28Q9NXS3 AP000907.4-201ENST00000604143 237 ntBASIC1.16□□□□□ -2.22
KLHL28Q9NXS3 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.16□□□□□ -2.22
KLHL28Q9NXS3 AC004492.1-201ENST00000607036 742 ntBASIC1.16□□□□□ -2.22
KLHL28Q9NXS3 DISC2.1-201ENST00000612827 205 ntBASIC1.16□□□□□ -2.22
KLHL28Q9NXS3 SNORD113-7-201ENST00000363762 77 ntBASIC1.15□□□□□ -2.23
KLHL28Q9NXS3 Y_RNA.224-201ENST00000364308 111 ntBASIC1.15□□□□□ -2.23
KLHL28Q9NXS3 RNU6-214P-201ENST00000384130 107 ntBASIC1.15□□□□□ -2.23
KLHL28Q9NXS3 Y_RNA.554-201ENST00000384672 102 ntBASIC1.15□□□□□ -2.23
KLHL28Q9NXS3 MIR515-2-201ENST00000384883 83 ntBASIC1.15□□□□□ -2.23
KLHL28Q9NXS3 MIR515-1-201ENST00000384884 83 ntBASIC1.15□□□□□ -2.23
KLHL28Q9NXS3 MIR487A-201ENST00000385009 80 ntBASIC1.15□□□□□ -2.23
KLHL28Q9NXS3 SNORA40.6-201ENST00000391153 128 ntBASIC1.15□□□□□ -2.23
KLHL28Q9NXS3 RNU6-332P-201ENST00000391193 108 ntBASIC1.15□□□□□ -2.23
KLHL28Q9NXS3 AL590632.1-201ENST00000424289 371 ntBASIC1.15□□□□□ -2.23
KLHL28Q9NXS3 HMGN2P34-201ENST00000437647 269 ntBASIC1.15□□□□□ -2.23
KLHL28Q9NXS3 MTCO3P8-201ENST00000453691 755 ntBASIC1.15□□□□□ -2.23
KLHL28Q9NXS3 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.15□□□□□ -2.23
KLHL28Q9NXS3 HMGN2P26-201ENST00000463169 339 ntBASIC1.15□□□□□ -2.23
KLHL28Q9NXS3 AC007215.1-201ENST00000464893 276 ntBASIC1.15□□□□□ -2.23
KLHL28Q9NXS3 AF186996.7-201ENST00000492781 209 ntBASIC1.15□□□□□ -2.23
KLHL28Q9NXS3 AL163195.1-201ENST00000496941 348 ntBASIC1.15□□□□□ -2.23
KLHL28Q9NXS3 RNU6-1146P-201ENST00000516282 102 ntBASIC1.15□□□□□ -2.23
KLHL28Q9NXS3 CYP3A52P-201ENST00000563326 91 ntBASIC1.15□□□□□ -2.23
KLHL28Q9NXS3 AC015540.1-201ENST00000615828 501 ntBASIC1.15□□□□□ -2.23
KLHL28Q9NXS3 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.15□□□□□ -2.23
KLHL28Q9NXS3 MIR8065-201ENST00000620577 100 ntBASIC1.15□□□□□ -2.23
KLHL28Q9NXS3 MIR1321-201ENST00000637766 79 ntBASIC1.15□□□□□ -2.23
KLHL28Q9NXS3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.14□□□□□ -2.23
KLHL28Q9NXS3 RNY3P3-201ENST00000363816 102 ntBASIC1.14□□□□□ -2.23
KLHL28Q9NXS3 Y_RNA.269-201ENST00000364685 89 ntBASIC1.14□□□□□ -2.23
KLHL28Q9NXS3 MIR521-1-201ENST00000384902 87 ntBASIC1.14□□□□□ -2.23
KLHL28Q9NXS3 MIR1276-201ENST00000408707 83 ntBASIC1.14□□□□□ -2.23
KLHL28Q9NXS3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.14□□□□□ -2.23
KLHL28Q9NXS3 SNX2P2-201ENST00000424553 323 ntBASIC1.14□□□□□ -2.23
KLHL28Q9NXS3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.14□□□□□ -2.23
KLHL28Q9NXS3 RNU7-66P-201ENST00000459469 62 ntBASIC1.14□□□□□ -2.23
KLHL28Q9NXS3 AC004223.1-201ENST00000479840 271 ntBASIC1.14□□□□□ -2.23
KLHL28Q9NXS3 AC105313.1-201ENST00000509121 353 ntBASIC1.14□□□□□ -2.23
KLHL28Q9NXS3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.14□□□□□ -2.23
KLHL28Q9NXS3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.14□□□□□ -2.23
KLHL28Q9NXS3 AL512310.8-201ENST00000550183 120 ntBASIC1.14□□□□□ -2.23
KLHL28Q9NXS3 AC026371.1-201ENST00000551867 419 ntBASIC1.14□□□□□ -2.23
KLHL28Q9NXS3 AL442163.3-201ENST00000554110 156 ntBASIC1.14□□□□□ -2.23
KLHL28Q9NXS3 ZNF519P2-201ENST00000557032 169 ntBASIC1.14□□□□□ -2.23
KLHL28Q9NXS3 MIR4742-201ENST00000581069 85 ntBASIC1.14□□□□□ -2.23
KLHL28Q9NXS3 AC100830.2-201ENST00000581636 240 ntBASIC1.14□□□□□ -2.23
KLHL28Q9NXS3 AC146944.4-201ENST00000602697 718 ntBASIC1.14□□□□□ -2.23
KLHL28Q9NXS3 AL365434.2-201ENST00000607979 234 ntBASIC1.14□□□□□ -2.23
KLHL28Q9NXS3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.14□□□□□ -2.23
KLHL28Q9NXS3 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.14□□□□□ -2.23
KLHL28Q9NXS3 AC024614.3-201ENST00000637860 256 ntBASIC1.14□□□□□ -2.23
KLHL28Q9NXS3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
KLHL28Q9NXS3 MTND4P5-201ENST00000435821 1374 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms