Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 RNU6-667P-201ENST00000517186 102 ntBASIC1.87□□□□□ -2.11
NDE1Q9NXR1 RN7SKP295-201ENST00000517264 153 ntBASIC1.87□□□□□ -2.11
NDE1Q9NXR1 AC022868.1-201ENST00000517767 391 ntBASIC1.87□□□□□ -2.11
NDE1Q9NXR1 IGKV3-31-201ENST00000523109 329 ntBASIC1.87□□□□□ -2.11
NDE1Q9NXR1 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.87□□□□□ -2.11
NDE1Q9NXR1 AC022616.8-201ENST00000533569 253 ntBASIC1.87□□□□□ -2.11
NDE1Q9NXR1 AC018630.3-201ENST00000542637 96 ntBASIC1.87□□□□□ -2.11
NDE1Q9NXR1 MIR5006-201ENST00000583027 110 ntBASIC1.87□□□□□ -2.11
NDE1Q9NXR1 AC125232.2-201ENST00000592457 143 ntBASIC1.87□□□□□ -2.11
NDE1Q9NXR1 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.87□□□□□ -2.11
NDE1Q9NXR1 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.87□□□□□ -2.11
NDE1Q9NXR1 AC022202.1-201ENST00000613515 211 ntBASIC1.87□□□□□ -2.11
NDE1Q9NXR1 AC005562.2-201ENST00000618264 111 ntBASIC1.87□□□□□ -2.11
NDE1Q9NXR1 AC091925.1-201ENST00000623204 462 ntBASIC1.87□□□□□ -2.11
NDE1Q9NXR1 AC138305.3-201ENST00000624988 240 ntBASIC1.87□□□□□ -2.11
NDE1Q9NXR1 AC134503.1-201ENST00000633048 54 ntBASIC1.87□□□□□ -2.11
NDE1Q9NXR1 AC243829.7-201ENST00000633081 225 ntBASIC1.87□□□□□ -2.11
NDE1Q9NXR1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
NDE1Q9NXR1 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.87□□□□□ -2.11
NDE1Q9NXR1 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
NDE1Q9NXR1 Y_RNA.148-201ENST00000363557 117 ntBASIC1.86□□□□□ -2.11
NDE1Q9NXR1 SNORD115-8-201ENST00000363856 82 ntBASIC1.86□□□□□ -2.11
NDE1Q9NXR1 RNU6-879P-201ENST00000364328 108 ntBASIC1.86□□□□□ -2.11
NDE1Q9NXR1 SNORD115-38-201ENST00000365037 82 ntBASIC1.86□□□□□ -2.11
NDE1Q9NXR1 RNU6-234P-201ENST00000365229 104 ntBASIC1.86□□□□□ -2.11
NDE1Q9NXR1 XGY1-201ENST00000381172 446 ntBASIC1.86□□□□□ -2.11
NDE1Q9NXR1 RNU6-26P-201ENST00000383985 107 ntBASIC1.86□□□□□ -2.11
NDE1Q9NXR1 RNU6-708P-201ENST00000384217 107 ntBASIC1.86□□□□□ -2.11
NDE1Q9NXR1 Y_RNA.592-201ENST00000410274 109 ntBASIC1.86□□□□□ -2.11
NDE1Q9NXR1 CBX3P6-201ENST00000430257 527 ntBASIC1.86□□□□□ -2.11
NDE1Q9NXR1 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.86□□□□□ -2.11
NDE1Q9NXR1 MTND4P19-201ENST00000446659 478 ntBASIC1.86□□□□□ -2.11
NDE1Q9NXR1 Y_RNA.638-201ENST00000459374 113 ntBASIC1.86□□□□□ -2.11
NDE1Q9NXR1 AC007215.1-201ENST00000464893 276 ntBASIC1.86□□□□□ -2.11
NDE1Q9NXR1 RNU6-991P-201ENST00000516168 107 ntBASIC1.86□□□□□ -2.11
NDE1Q9NXR1 RNU5F-4P-201ENST00000516581 114 ntBASIC1.86□□□□□ -2.11
NDE1Q9NXR1 RNU4-77P-201ENST00000516692 156 ntBASIC1.86□□□□□ -2.11
NDE1Q9NXR1 RNU7-4P-201ENST00000516961 62 ntBASIC1.86□□□□□ -2.11
NDE1Q9NXR1 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.86□□□□□ -2.11
NDE1Q9NXR1 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.86□□□□□ -2.11
NDE1Q9NXR1 AC006600.1-201ENST00000572529 153 ntBASIC1.86□□□□□ -2.11
NDE1Q9NXR1 AC090617.3-201ENST00000573670 475 ntBASIC1.86□□□□□ -2.11
NDE1Q9NXR1 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.86□□□□□ -2.11
NDE1Q9NXR1 MIR4287-201ENST00000579398 78 ntBASIC1.86□□□□□ -2.11
NDE1Q9NXR1 SNRPGP17-201ENST00000603780 214 ntBASIC1.86□□□□□ -2.11
NDE1Q9NXR1 SNORD58B-201ENST00000607313 66 ntBASIC1.86□□□□□ -2.11
NDE1Q9NXR1 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.86□□□□□ -2.11
NDE1Q9NXR1 AC005296.1-201ENST00000616145 209 ntBASIC1.86□□□□□ -2.11
NDE1Q9NXR1 AL132822.1-201ENST00000617063 513 ntBASIC1.86□□□□□ -2.11
NDE1Q9NXR1 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
NDE1Q9NXR1 BX322639.1-202ENST00000423987 2213 ntBASIC1.85□□□□□ -2.11
NDE1Q9NXR1 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
NDE1Q9NXR1 Y_RNA.128-201ENST00000363391 112 ntBASIC1.85□□□□□ -2.11
NDE1Q9NXR1 SNORA22B-201ENST00000383876 138 ntBASIC1.85□□□□□ -2.11
NDE1Q9NXR1 MIR561-201ENST00000385216 97 ntBASIC1.85□□□□□ -2.11
NDE1Q9NXR1 RNA5SP213-201ENST00000391031 106 ntBASIC1.85□□□□□ -2.11
NDE1Q9NXR1 RNU1-139P-201ENST00000391307 165 ntBASIC1.85□□□□□ -2.11
NDE1Q9NXR1 AC009963.1-201ENST00000417265 157 ntBASIC1.85□□□□□ -2.11
NDE1Q9NXR1 MCFD2P1-201ENST00000417812 300 ntBASIC1.85□□□□□ -2.11
NDE1Q9NXR1 AC114482.1-201ENST00000418010 247 ntBASIC1.85□□□□□ -2.11
NDE1Q9NXR1 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.85□□□□□ -2.11
NDE1Q9NXR1 MTCYBP6-201ENST00000441810 138 ntBASIC1.85□□□□□ -2.11
NDE1Q9NXR1 AC009238.1-201ENST00000442165 424 ntBASIC1.85□□□□□ -2.11
NDE1Q9NXR1 AC096638.1-201ENST00000444678 216 ntBASIC1.85□□□□□ -2.11
NDE1Q9NXR1 AC009237.6-201ENST00000446969 424 ntBASIC1.85□□□□□ -2.11
NDE1Q9NXR1 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.85□□□□□ -2.11
NDE1Q9NXR1 RNU7-14P-201ENST00000459331 62 ntBASIC1.85□□□□□ -2.11
NDE1Q9NXR1 RPL23AP42-201ENST00000471152 471 ntBASIC1.85□□□□□ -2.11
NDE1Q9NXR1 AC091179.3-201ENST00000474761 144 ntBASIC1.85□□□□□ -2.11
NDE1Q9NXR1 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
NDE1Q9NXR1 Y_RNA.711-201ENST00000516993 102 ntBASIC1.85□□□□□ -2.11
NDE1Q9NXR1 RNU1-117P-201ENST00000517041 158 ntBASIC1.85□□□□□ -2.11
NDE1Q9NXR1 AC093023.1-201ENST00000547375 507 ntBASIC1.85□□□□□ -2.11
NDE1Q9NXR1 MIR5089-201ENST00000580047 84 ntBASIC1.85□□□□□ -2.11
NDE1Q9NXR1 AL109918.3-201ENST00000603072 338 ntBASIC1.85□□□□□ -2.11
NDE1Q9NXR1 AC025754.2-201ENST00000606491 432 ntBASIC1.85□□□□□ -2.11
NDE1Q9NXR1 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.85□□□□□ -2.11
NDE1Q9NXR1 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.85□□□□□ -2.11
NDE1Q9NXR1 MIR6873-201ENST00000622788 63 ntBASIC1.85□□□□□ -2.11
NDE1Q9NXR1 MIR4272-201ENST00000635924 64 ntBASIC1.85□□□□□ -2.11
NDE1Q9NXR1 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.85□□□□□ -2.11
NDE1Q9NXR1 RNU6-545P-201ENST00000362681 104 ntBASIC1.84□□□□□ -2.11
NDE1Q9NXR1 RNU1-76P-201ENST00000362903 159 ntBASIC1.84□□□□□ -2.11
NDE1Q9NXR1 MIR628-201ENST00000385229 95 ntBASIC1.84□□□□□ -2.11
NDE1Q9NXR1 AL139156.1-201ENST00000412785 841 ntBASIC1.84□□□□□ -2.11
NDE1Q9NXR1 EIF1P2-201ENST00000428233 350 ntBASIC1.84□□□□□ -2.11
NDE1Q9NXR1 AL163540.1-201ENST00000485382 386 ntBASIC1.84□□□□□ -2.11
NDE1Q9NXR1 AC132942.1-201ENST00000486753 483 ntBASIC1.84□□□□□ -2.11
NDE1Q9NXR1 RNA5SP54-201ENST00000516951 92 ntBASIC1.84□□□□□ -2.11
NDE1Q9NXR1 AC144568.1-201ENST00000520139 137 ntBASIC1.84□□□□□ -2.11
NDE1Q9NXR1 AP003072.1-201ENST00000531740 145 ntBASIC1.84□□□□□ -2.11
NDE1Q9NXR1 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
NDE1Q9NXR1 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.84□□□□□ -2.11
NDE1Q9NXR1 MIR4769-201ENST00000584126 77 ntBASIC1.84□□□□□ -2.11
NDE1Q9NXR1 MZT1P2-201ENST00000604387 248 ntBASIC1.84□□□□□ -2.11
NDE1Q9NXR1 AC040896.1-201ENST00000613819 479 ntBASIC1.84□□□□□ -2.11
NDE1Q9NXR1 TCL6_2.1-201ENST00000615162 119 ntBASIC1.84□□□□□ -2.11
NDE1Q9NXR1 U2.1-201ENST00000618978 145 ntBASIC1.84□□□□□ -2.11
NDE1Q9NXR1 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.84□□□□□ -2.11
NDE1Q9NXR1 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms