Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.05
LIN7CQ9NUP9 Y_RNA.153-201ENST00000363615 91 ntBASIC2.27□□□□□ -2.05
LIN7CQ9NUP9 RNA5SP493-201ENST00000364115 91 ntBASIC2.27□□□□□ -2.05
LIN7CQ9NUP9 RNU6-738P-201ENST00000384531 106 ntBASIC2.27□□□□□ -2.05
LIN7CQ9NUP9 MIR518A2-201ENST00000384966 87 ntBASIC2.27□□□□□ -2.05
LIN7CQ9NUP9 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.27□□□□□ -2.05
LIN7CQ9NUP9 SUMO1P4-201ENST00000429430 302 ntBASIC2.27□□□□□ -2.05
LIN7CQ9NUP9 AL109933.2-201ENST00000452651 260 ntBASIC2.27□□□□□ -2.05
LIN7CQ9NUP9 RNU1-131P-201ENST00000458943 161 ntBASIC2.27□□□□□ -2.05
LIN7CQ9NUP9 RNU6-221P-201ENST00000459541 99 ntBASIC2.27□□□□□ -2.05
LIN7CQ9NUP9 HMGB3P3-201ENST00000510526 400 ntBASIC2.27□□□□□ -2.05
LIN7CQ9NUP9 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.27□□□□□ -2.05
LIN7CQ9NUP9 RNU6-856P-201ENST00000516959 98 ntBASIC2.27□□□□□ -2.05
LIN7CQ9NUP9 AC131281.1-201ENST00000522984 164 ntBASIC2.27□□□□□ -2.05
LIN7CQ9NUP9 AL360085.1-201ENST00000604713 532 ntBASIC2.27□□□□□ -2.05
LIN7CQ9NUP9 AC004467.1-201ENST00000615678 330 ntBASIC2.27□□□□□ -2.05
LIN7CQ9NUP9 AC009487.4-201ENST00000624969 3585 ntBASIC2.27□□□□□ -2.05
LIN7CQ9NUP9 AP006437.1-201ENST00000641440 3685 ntBASIC2.27□□□□□ -2.05
LIN7CQ9NUP9 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LIN7CQ9NUP9 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LIN7CQ9NUP9 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LIN7CQ9NUP9 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LIN7CQ9NUP9 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LIN7CQ9NUP9 RNU6-23P-201ENST00000363283 107 ntBASIC2.26□□□□□ -2.05
LIN7CQ9NUP9 Y_RNA.143-201ENST00000363520 106 ntBASIC2.26□□□□□ -2.05
LIN7CQ9NUP9 Y_RNA.162-201ENST00000363683 102 ntBASIC2.26□□□□□ -2.05
LIN7CQ9NUP9 RNU6-1310P-201ENST00000384153 107 ntBASIC2.26□□□□□ -2.05
LIN7CQ9NUP9 RNU2-20P-201ENST00000410425 191 ntBASIC2.26□□□□□ -2.05
LIN7CQ9NUP9 DPH3P2-201ENST00000422618 250 ntBASIC2.26□□□□□ -2.05
LIN7CQ9NUP9 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.26□□□□□ -2.05
LIN7CQ9NUP9 AC107083.1-201ENST00000439643 279 ntBASIC2.26□□□□□ -2.05
LIN7CQ9NUP9 AC025750.2-201ENST00000442609 450 ntBASIC2.26□□□□□ -2.05
LIN7CQ9NUP9 AL118496.2-201ENST00000448300 230 ntBASIC2.26□□□□□ -2.05
LIN7CQ9NUP9 RNU6-897P-201ENST00000517135 105 ntBASIC2.26□□□□□ -2.05
LIN7CQ9NUP9 Y_RNA.720-201ENST00000517166 92 ntBASIC2.26□□□□□ -2.05
LIN7CQ9NUP9 AC005176.2-201ENST00000596933 147 ntBASIC2.26□□□□□ -2.05
LIN7CQ9NUP9 AC008737.2-201ENST00000599446 118 ntBASIC2.26□□□□□ -2.05
LIN7CQ9NUP9 AL355297.3-201ENST00000604082 446 ntBASIC2.26□□□□□ -2.05
LIN7CQ9NUP9 AC006001.4-201ENST00000622243 395 ntBASIC2.26□□□□□ -2.05
LIN7CQ9NUP9 AC091932.3-201ENST00000624223 323 ntBASIC2.26□□□□□ -2.05
LIN7CQ9NUP9 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LIN7CQ9NUP9 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
LIN7CQ9NUP9 AL159152.1-201ENST00000635019 2587 ntBASIC2.26□□□□□ -2.05
LIN7CQ9NUP9 MIR410-201ENST00000362222 80 ntBASIC2.25□□□□□ -2.05
LIN7CQ9NUP9 RNU1-58P-201ENST00000362413 163 ntBASIC2.25□□□□□ -2.05
LIN7CQ9NUP9 RNU6-525P-201ENST00000363685 104 ntBASIC2.25□□□□□ -2.05
LIN7CQ9NUP9 Y_RNA.210-201ENST00000364161 110 ntBASIC2.25□□□□□ -2.05
LIN7CQ9NUP9 SNORA67.1-201ENST00000364749 141 ntBASIC2.25□□□□□ -2.05
LIN7CQ9NUP9 SNORA72.2-201ENST00000365028 127 ntBASIC2.25□□□□□ -2.05
LIN7CQ9NUP9 HMGN2P35-201ENST00000412164 270 ntBASIC2.25□□□□□ -2.05
LIN7CQ9NUP9 AC060773.1-201ENST00000421698 310 ntBASIC2.25□□□□□ -2.05
LIN7CQ9NUP9 AC005002.2-201ENST00000438228 269 ntBASIC2.25□□□□□ -2.05
LIN7CQ9NUP9 AP001486.1-201ENST00000463339 476 ntBASIC2.25□□□□□ -2.05
LIN7CQ9NUP9 RNU6-327P-201ENST00000516270 127 ntBASIC2.25□□□□□ -2.05
LIN7CQ9NUP9 RNU6-1046P-201ENST00000516538 107 ntBASIC2.25□□□□□ -2.05
LIN7CQ9NUP9 Y_RNA.713-201ENST00000517013 96 ntBASIC2.25□□□□□ -2.05
LIN7CQ9NUP9 SNORA31.25-201ENST00000517242 134 ntBASIC2.25□□□□□ -2.05
LIN7CQ9NUP9 AC025647.1-201ENST00000517879 253 ntBASIC2.25□□□□□ -2.05
LIN7CQ9NUP9 AP005660.1-201ENST00000522972 293 ntBASIC2.25□□□□□ -2.05
LIN7CQ9NUP9 MIR3169-201ENST00000578032 83 ntBASIC2.25□□□□□ -2.05
LIN7CQ9NUP9 MIR3670-2-201ENST00000582974 65 ntBASIC2.25□□□□□ -2.05
LIN7CQ9NUP9 MIR3670-1-201ENST00000584160 65 ntBASIC2.25□□□□□ -2.05
LIN7CQ9NUP9 MIR3670-3-201ENST00000584855 65 ntBASIC2.25□□□□□ -2.05
LIN7CQ9NUP9 MIR3670-4-201ENST00000612260 65 ntBASIC2.25□□□□□ -2.05
LIN7CQ9NUP9 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
LIN7CQ9NUP9 Y_RNA.145-201ENST00000363527 102 ntBASIC2.24□□□□□ -2.05
LIN7CQ9NUP9 RNU6-454P-201ENST00000364292 107 ntBASIC2.24□□□□□ -2.05
LIN7CQ9NUP9 RNU6-937P-201ENST00000384325 106 ntBASIC2.24□□□□□ -2.05
LIN7CQ9NUP9 MIR597-201ENST00000384968 97 ntBASIC2.24□□□□□ -2.05
LIN7CQ9NUP9 MIR524-201ENST00000385242 87 ntBASIC2.24□□□□□ -2.05
LIN7CQ9NUP9 SNORA40.19-201ENST00000390846 128 ntBASIC2.24□□□□□ -2.05
LIN7CQ9NUP9 RNU11-3P-201ENST00000391111 133 ntBASIC2.24□□□□□ -2.05
LIN7CQ9NUP9 COTL1P1-201ENST00000422309 375 ntBASIC2.24□□□□□ -2.05
LIN7CQ9NUP9 MTND2P23-201ENST00000422990 651 ntBASIC2.24□□□□□ -2.05
LIN7CQ9NUP9 AC087499.2-201ENST00000432861 149 ntBASIC2.24□□□□□ -2.05
LIN7CQ9NUP9 RNA5SP367-201ENST00000516557 118 ntBASIC2.24□□□□□ -2.05
LIN7CQ9NUP9 AC004486.1-201ENST00000546846 233 ntBASIC2.24□□□□□ -2.05
LIN7CQ9NUP9 LARP7P3-201ENST00000579888 337 ntBASIC2.24□□□□□ -2.05
LIN7CQ9NUP9 AC116312.1-201ENST00000606841 314 ntBASIC2.24□□□□□ -2.05
LIN7CQ9NUP9 AL137790.1-201ENST00000634283 177 ntBASIC2.24□□□□□ -2.05
LIN7CQ9NUP9 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
LIN7CQ9NUP9 AC245060.5-201ENST00000610778 3293 ntBASIC2.24□□□□□ -2.05
LIN7CQ9NUP9 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.24□□□□□ -2.05
LIN7CQ9NUP9 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
LIN7CQ9NUP9 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.23□□□□□ -2.05
LIN7CQ9NUP9 ZNF271P-202ENST00000465539 1970 ntBASIC2.23□□□□□ -2.05
LIN7CQ9NUP9 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LIN7CQ9NUP9 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LIN7CQ9NUP9 Y_RNA.101-201ENST00000363154 102 ntBASIC2.23□□□□□ -2.05
LIN7CQ9NUP9 Y_RNA.152-201ENST00000363578 100 ntBASIC2.23□□□□□ -2.05
LIN7CQ9NUP9 DEFA7P-201ENST00000382676 285 ntBASIC2.23□□□□□ -2.05
LIN7CQ9NUP9 NDUFB4P4-201ENST00000404822 243 ntBASIC2.23□□□□□ -2.05
LIN7CQ9NUP9 MIR1283-2-201ENST00000408621 87 ntBASIC2.23□□□□□ -2.05
LIN7CQ9NUP9 AC016909.1-201ENST00000415916 166 ntBASIC2.23□□□□□ -2.05
LIN7CQ9NUP9 HMGN2P3-201ENST00000433603 273 ntBASIC2.23□□□□□ -2.05
LIN7CQ9NUP9 HMGN2P5-201ENST00000436882 273 ntBASIC2.23□□□□□ -2.05
LIN7CQ9NUP9 AL135938.1-201ENST00000443141 297 ntBASIC2.23□□□□□ -2.05
LIN7CQ9NUP9 AC073910.1-201ENST00000445047 438 ntBASIC2.23□□□□□ -2.05
LIN7CQ9NUP9 MTATP8P1-201ENST00000467115 207 ntBASIC2.23□□□□□ -2.05
LIN7CQ9NUP9 AC010655.3-201ENST00000478818 450 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms