Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC006380.1-201ENST00000603598 186 ntBASIC3.37□□□□□ -1.87
PDLIM7Q9NR12 RNU6-91P-201ENST00000607774 107 ntBASIC3.37□□□□□ -1.87
PDLIM7Q9NR12 AC108706.1-201ENST00000611053 297 ntBASIC3.37□□□□□ -1.87
PDLIM7Q9NR12 UCA1.1-201ENST00000620952 75 ntBASIC3.37□□□□□ -1.87
PDLIM7Q9NR12 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.37□□□□□ -1.87
PDLIM7Q9NR12 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.37□□□□□ -1.87
PDLIM7Q9NR12 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
PDLIM7Q9NR12 AC010889.1-201ENST00000566193 2666 ntBASIC3.37□□□□□ -1.87
PDLIM7Q9NR12 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
PDLIM7Q9NR12 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PDLIM7Q9NR12 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PDLIM7Q9NR12 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
PDLIM7Q9NR12 RNU6-1010P-201ENST00000362757 107 ntBASIC3.36□□□□□ -1.87
PDLIM7Q9NR12 SNORD114-19-201ENST00000363072 75 ntBASIC3.36□□□□□ -1.87
PDLIM7Q9NR12 RNU6-324P-201ENST00000363957 106 ntBASIC3.36□□□□□ -1.87
PDLIM7Q9NR12 MIR147B-201ENST00000390185 80 ntBASIC3.36□□□□□ -1.87
PDLIM7Q9NR12 RNU6-1248P-201ENST00000391096 64 ntBASIC3.36□□□□□ -1.87
PDLIM7Q9NR12 U3.40-201ENST00000408706 208 ntBASIC3.36□□□□□ -1.87
PDLIM7Q9NR12 RNA5SP201-201ENST00000410316 124 ntBASIC3.36□□□□□ -1.87
PDLIM7Q9NR12 RNU5E-9P-201ENST00000411164 104 ntBASIC3.36□□□□□ -1.87
PDLIM7Q9NR12 AC004866.1-201ENST00000411748 78 ntBASIC3.36□□□□□ -1.87
PDLIM7Q9NR12 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.36□□□□□ -1.87
PDLIM7Q9NR12 AIMP1P2-201ENST00000425294 312 ntBASIC3.36□□□□□ -1.87
PDLIM7Q9NR12 AC027124.2-201ENST00000428249 105 ntBASIC3.36□□□□□ -1.87
PDLIM7Q9NR12 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.36□□□□□ -1.87
PDLIM7Q9NR12 YWHAEP4-201ENST00000505390 198 ntBASIC3.36□□□□□ -1.87
PDLIM7Q9NR12 SEM1P1-201ENST00000506694 209 ntBASIC3.36□□□□□ -1.87
PDLIM7Q9NR12 RNU6-436P-201ENST00000516171 114 ntBASIC3.36□□□□□ -1.87
PDLIM7Q9NR12 RNU2-12P-201ENST00000517216 168 ntBASIC3.36□□□□□ -1.87
PDLIM7Q9NR12 AC007318.2-201ENST00000620999 243 ntBASIC3.36□□□□□ -1.87
PDLIM7Q9NR12 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
PDLIM7Q9NR12 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PDLIM7Q9NR12 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
PDLIM7Q9NR12 RNU4-15P-201ENST00000362613 141 ntBASIC3.35□□□□□ -1.87
PDLIM7Q9NR12 RNA5SP383-201ENST00000362934 120 ntBASIC3.35□□□□□ -1.87
PDLIM7Q9NR12 RNU6-454P-201ENST00000364292 107 ntBASIC3.35□□□□□ -1.87
PDLIM7Q9NR12 SNORD87-201ENST00000364849 89 ntBASIC3.35□□□□□ -1.87
PDLIM7Q9NR12 SNORD50.2-201ENST00000365465 70 ntBASIC3.35□□□□□ -1.87
PDLIM7Q9NR12 RNU6-1264P-201ENST00000383891 107 ntBASIC3.35□□□□□ -1.87
PDLIM7Q9NR12 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.35□□□□□ -1.87
PDLIM7Q9NR12 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.35□□□□□ -1.87
PDLIM7Q9NR12 EEF1B2P7-201ENST00000451177 676 ntBASIC3.35□□□□□ -1.87
PDLIM7Q9NR12 Y_RNA.637-201ENST00000459424 114 ntBASIC3.35□□□□□ -1.87
PDLIM7Q9NR12 RPL23AP70-201ENST00000483361 460 ntBASIC3.35□□□□□ -1.87
PDLIM7Q9NR12 AC140059.1-201ENST00000489238 361 ntBASIC3.35□□□□□ -1.87
PDLIM7Q9NR12 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PDLIM7Q9NR12 AP001485.1-201ENST00000604799 199 ntBASIC3.35□□□□□ -1.87
PDLIM7Q9NR12 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PDLIM7Q9NR12 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PDLIM7Q9NR12 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 RNU6-1130P-201ENST00000365434 107 ntBASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 SNORA40.19-201ENST00000390846 128 ntBASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 RNU2-2P-201ENST00000410396 191 ntBASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 RPL32P35-201ENST00000415214 394 ntBASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 AC063976.3-201ENST00000426849 329 ntBASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 AC004386.2-201ENST00000441858 148 ntBASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 snoU13.14-201ENST00000459372 104 ntBASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 RPL31P41-201ENST00000477967 372 ntBASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 TRBV12-1-201ENST00000479785 344 ntBASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 SUMO2P18-201ENST00000518873 252 ntBASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 DEFB131C-201ENST00000528817 165 ntBASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 EIF4A1P12-201ENST00000551910 141 ntBASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 AL713866.2-201ENST00000603579 219 ntBASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 RNU2-4P-201ENST00000606190 192 ntBASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 U2.15-201ENST00000611544 191 ntBASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 U2.16-201ENST00000613119 191 ntBASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 U2.12-201ENST00000613778 191 ntBASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 U2.9-201ENST00000615427 191 ntBASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 U2.11-201ENST00000616345 191 ntBASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 U2.2-201ENST00000616535 191 ntBASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 U2.3-201ENST00000617785 191 ntBASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 AC005562.2-201ENST00000618264 111 ntBASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 U2.19-201ENST00000618602 191 ntBASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 RNU2-1-201ENST00000618664 191 ntBASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 U2.6-201ENST00000619225 191 ntBASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 U2.5-201ENST00000619465 191 ntBASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 U2.10-201ENST00000620268 191 ntBASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.34□□□□□ -1.87
PDLIM7Q9NR12 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PDLIM7Q9NR12 Y_RNA.7-201ENST00000362352 102 ntBASIC3.33□□□□□ -1.88
PDLIM7Q9NR12 Y_RNA.272-201ENST00000364696 102 ntBASIC3.33□□□□□ -1.88
PDLIM7Q9NR12 SNORD116-18-201ENST00000383961 92 ntBASIC3.33□□□□□ -1.88
PDLIM7Q9NR12 RNA5SP293-201ENST00000410527 113 ntBASIC3.33□□□□□ -1.88
PDLIM7Q9NR12 RNA5SP508-201ENST00000411327 119 ntBASIC3.33□□□□□ -1.88
PDLIM7Q9NR12 MTATP6P29-201ENST00000415057 132 ntBASIC3.33□□□□□ -1.88
PDLIM7Q9NR12 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.33□□□□□ -1.88
PDLIM7Q9NR12 AC145146.1-201ENST00000496370 254 ntBASIC3.33□□□□□ -1.88
PDLIM7Q9NR12 RNU1-117P-201ENST00000517041 158 ntBASIC3.33□□□□□ -1.88
PDLIM7Q9NR12 AC009127.3-201ENST00000570531 403 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 152.4 ms