Protein–RNA interactions for Protein: Q9NPR2

SEMA4B, Semaphorin-4B, humanhuman

Predicted RBP Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4BQ9NPR2 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.52□□□□□ -2.01
SEMA4BQ9NPR2 Z98949.2-201ENST00000440996 144 ntBASIC2.52□□□□□ -2.01
SEMA4BQ9NPR2 AC145146.1-201ENST00000496370 254 ntBASIC2.52□□□□□ -2.01
SEMA4BQ9NPR2 SNORA40.9-201ENST00000515895 93 ntBASIC2.52□□□□□ -2.01
SEMA4BQ9NPR2 RNU6-496P-201ENST00000516145 99 ntBASIC2.52□□□□□ -2.01
SEMA4BQ9NPR2 SNORA25.14-201ENST00000516481 132 ntBASIC2.52□□□□□ -2.01
SEMA4BQ9NPR2 SCARNA24.2-201ENST00000516968 130 ntBASIC2.52□□□□□ -2.01
SEMA4BQ9NPR2 RNU6-111P-201ENST00000517179 105 ntBASIC2.52□□□□□ -2.01
SEMA4BQ9NPR2 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.52□□□□□ -2.01
SEMA4BQ9NPR2 AC018630.3-201ENST00000542637 96 ntBASIC2.52□□□□□ -2.01
SEMA4BQ9NPR2 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.52□□□□□ -2.01
SEMA4BQ9NPR2 MIR4672-201ENST00000583126 81 ntBASIC2.52□□□□□ -2.01
SEMA4BQ9NPR2 AL356575.1-201ENST00000603008 283 ntBASIC2.52□□□□□ -2.01
SEMA4BQ9NPR2 AC010999.1-201ENST00000611856 324 ntBASIC2.52□□□□□ -2.01
SEMA4BQ9NPR2 AC141273.2-201ENST00000618989 130 ntBASIC2.52□□□□□ -2.01
SEMA4BQ9NPR2 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.52□□□□□ -2.01
SEMA4BQ9NPR2 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
SEMA4BQ9NPR2 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SEMA4BQ9NPR2 Z82209.1-201ENST00000422141 2135 ntBASIC2.51□□□□□ -2.01
SEMA4BQ9NPR2 MIR335-201ENST00000362173 94 ntBASIC2.51□□□□□ -2.01
SEMA4BQ9NPR2 RNU4-15P-201ENST00000362613 141 ntBASIC2.51□□□□□ -2.01
SEMA4BQ9NPR2 RNU6-626P-201ENST00000363354 107 ntBASIC2.51□□□□□ -2.01
SEMA4BQ9NPR2 Y_RNA.416-201ENST00000384014 113 ntBASIC2.51□□□□□ -2.01
SEMA4BQ9NPR2 Y_RNA.478-201ENST00000384358 107 ntBASIC2.51□□□□□ -2.01
SEMA4BQ9NPR2 RNU6-1072P-201ENST00000384703 107 ntBASIC2.51□□□□□ -2.01
SEMA4BQ9NPR2 RNU6-443P-201ENST00000384780 107 ntBASIC2.51□□□□□ -2.01
SEMA4BQ9NPR2 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SEMA4BQ9NPR2 MIR548H3-201ENST00000408771 118 ntBASIC2.51□□□□□ -2.01
SEMA4BQ9NPR2 RNU4-30P-201ENST00000410245 143 ntBASIC2.51□□□□□ -2.01
SEMA4BQ9NPR2 Y_RNA.597-201ENST00000410463 100 ntBASIC2.51□□□□□ -2.01
SEMA4BQ9NPR2 AL109933.2-201ENST00000452651 260 ntBASIC2.51□□□□□ -2.01
SEMA4BQ9NPR2 HSPE1P25-201ENST00000455484 251 ntBASIC2.51□□□□□ -2.01
SEMA4BQ9NPR2 SNORD109B-201ENST00000458961 67 ntBASIC2.51□□□□□ -2.01
SEMA4BQ9NPR2 SNORD109A-201ENST00000459128 67 ntBASIC2.51□□□□□ -2.01
SEMA4BQ9NPR2 AC007215.1-201ENST00000464893 276 ntBASIC2.51□□□□□ -2.01
SEMA4BQ9NPR2 AC004486.1-201ENST00000546846 233 ntBASIC2.51□□□□□ -2.01
SEMA4BQ9NPR2 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.51□□□□□ -2.01
SEMA4BQ9NPR2 MZT1P2-201ENST00000604387 248 ntBASIC2.51□□□□□ -2.01
SEMA4BQ9NPR2 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.51□□□□□ -2.01
SEMA4BQ9NPR2 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.51□□□□□ -2.01
SEMA4BQ9NPR2 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SEMA4BQ9NPR2 U3.9-201ENST00000363823 204 ntBASIC2.5□□□□□ -2.01
SEMA4BQ9NPR2 Y_RNA.286-201ENST00000364813 102 ntBASIC2.5□□□□□ -2.01
SEMA4BQ9NPR2 RNU6-546P-201ENST00000383991 107 ntBASIC2.5□□□□□ -2.01
SEMA4BQ9NPR2 RNU6-20P-201ENST00000384106 107 ntBASIC2.5□□□□□ -2.01
SEMA4BQ9NPR2 Y_RNA.462-201ENST00000384268 102 ntBASIC2.5□□□□□ -2.01
SEMA4BQ9NPR2 Y_RNA.500-201ENST00000384466 111 ntBASIC2.5□□□□□ -2.01
SEMA4BQ9NPR2 MIR9-1-201ENST00000385198 89 ntBASIC2.5□□□□□ -2.01
SEMA4BQ9NPR2 AL603910.2-201ENST00000407268 136 ntBASIC2.5□□□□□ -2.01
SEMA4BQ9NPR2 RNA5SP184-201ENST00000411071 108 ntBASIC2.5□□□□□ -2.01
SEMA4BQ9NPR2 AC009238.1-201ENST00000442165 424 ntBASIC2.5□□□□□ -2.01
SEMA4BQ9NPR2 AC009237.6-201ENST00000446969 424 ntBASIC2.5□□□□□ -2.01
SEMA4BQ9NPR2 RNA5SP282-201ENST00000516355 108 ntBASIC2.5□□□□□ -2.01
SEMA4BQ9NPR2 RRN3P3-201ENST00000549207 578 ntBASIC2.5□□□□□ -2.01
SEMA4BQ9NPR2 MIR3670-2-201ENST00000582974 65 ntBASIC2.5□□□□□ -2.01
SEMA4BQ9NPR2 MIR5092-201ENST00000583139 88 ntBASIC2.5□□□□□ -2.01
SEMA4BQ9NPR2 MIR3670-1-201ENST00000584160 65 ntBASIC2.5□□□□□ -2.01
SEMA4BQ9NPR2 MIR3670-3-201ENST00000584855 65 ntBASIC2.5□□□□□ -2.01
SEMA4BQ9NPR2 RPL12P50-201ENST00000603116 116 ntBASIC2.5□□□□□ -2.01
SEMA4BQ9NPR2 MIR3670-4-201ENST00000612260 65 ntBASIC2.5□□□□□ -2.01
SEMA4BQ9NPR2 AC005520.5-201ENST00000613926 164 ntBASIC2.5□□□□□ -2.01
SEMA4BQ9NPR2 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.5□□□□□ -2.01
SEMA4BQ9NPR2 BX322639.1-202ENST00000423987 2213 ntBASIC2.5□□□□□ -2.01
SEMA4BQ9NPR2 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SEMA4BQ9NPR2 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SEMA4BQ9NPR2 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
SEMA4BQ9NPR2 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.49□□□□□ -2.01
SEMA4BQ9NPR2 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.49□□□□□ -2.01
SEMA4BQ9NPR2 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SEMA4BQ9NPR2 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.49□□□□□ -2.01
SEMA4BQ9NPR2 MTND5P35-201ENST00000557537 1720 ntBASIC2.49□□□□□ -2.01
SEMA4BQ9NPR2 Y_RNA.20-201ENST00000362479 113 ntBASIC2.49□□□□□ -2.01
SEMA4BQ9NPR2 Y_RNA.54-201ENST00000362766 105 ntBASIC2.49□□□□□ -2.01
SEMA4BQ9NPR2 RNU4-90P-201ENST00000362773 141 ntBASIC2.49□□□□□ -2.01
SEMA4BQ9NPR2 Y_RNA.179-201ENST00000363844 90 ntBASIC2.49□□□□□ -2.01
SEMA4BQ9NPR2 DEFA7P-201ENST00000382676 285 ntBASIC2.49□□□□□ -2.01
SEMA4BQ9NPR2 Y_RNA.539-201ENST00000384635 107 ntBASIC2.49□□□□□ -2.01
SEMA4BQ9NPR2 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
SEMA4BQ9NPR2 SNORA46.1-201ENST00000391069 153 ntBASIC2.49□□□□□ -2.01
SEMA4BQ9NPR2 MIR1294-201ENST00000408503 142 ntBASIC2.49□□□□□ -2.01
SEMA4BQ9NPR2 RNA5SP201-201ENST00000410316 124 ntBASIC2.49□□□□□ -2.01
SEMA4BQ9NPR2 Y_RNA.595-201ENST00000410403 105 ntBASIC2.49□□□□□ -2.01
SEMA4BQ9NPR2 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.49□□□□□ -2.01
SEMA4BQ9NPR2 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.49□□□□□ -2.01
SEMA4BQ9NPR2 RPL23AP94-201ENST00000512518 302 ntBASIC2.49□□□□□ -2.01
SEMA4BQ9NPR2 Y_RNA.683-201ENST00000516508 93 ntBASIC2.49□□□□□ -2.01
SEMA4BQ9NPR2 RNU7-110P-201ENST00000516891 62 ntBASIC2.49□□□□□ -2.01
SEMA4BQ9NPR2 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.49□□□□□ -2.01
SEMA4BQ9NPR2 EIF4A1P12-201ENST00000551910 141 ntBASIC2.49□□□□□ -2.01
SEMA4BQ9NPR2 MIR4423-201ENST00000580922 80 ntBASIC2.49□□□□□ -2.01
SEMA4BQ9NPR2 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.49□□□□□ -2.01
SEMA4BQ9NPR2 PCGEM1.1-201ENST00000613431 131 ntBASIC2.49□□□□□ -2.01
SEMA4BQ9NPR2 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.49□□□□□ -2.01
SEMA4BQ9NPR2 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SEMA4BQ9NPR2 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SEMA4BQ9NPR2 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.48□□□□□ -2.01
SEMA4BQ9NPR2 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SEMA4BQ9NPR2 VTRNA1-1-201ENST00000363120 99 ntBASIC2.48□□□□□ -2.01
SEMA4BQ9NPR2 RNU6-727P-201ENST00000363592 107 ntBASIC2.48□□□□□ -2.01
SEMA4BQ9NPR2 Y_RNA.277-201ENST00000364754 102 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 190.9 ms