Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 Y_RNA.179-201ENST00000363844 90 ntBASIC2.58□□□□□ -2
USP29Q9HBJ7 RNU6-961P-201ENST00000363893 105 ntBASIC2.58□□□□□ -2
USP29Q9HBJ7 RNA5SP456-201ENST00000364002 114 ntBASIC2.58□□□□□ -2
USP29Q9HBJ7 SNORA18.2-201ENST00000383865 132 ntBASIC2.58□□□□□ -2
USP29Q9HBJ7 Y_RNA.396-201ENST00000383949 103 ntBASIC2.58□□□□□ -2
USP29Q9HBJ7 RNU1-138P-201ENST00000384093 164 ntBASIC2.58□□□□□ -2
USP29Q9HBJ7 RNU6-793P-201ENST00000384233 104 ntBASIC2.58□□□□□ -2
USP29Q9HBJ7 MIR1302-3-201ENST00000408128 138 ntBASIC2.58□□□□□ -2
USP29Q9HBJ7 Y_RNA.597-201ENST00000410463 100 ntBASIC2.58□□□□□ -2
USP29Q9HBJ7 RPL21P38-201ENST00000418090 167 ntBASIC2.58□□□□□ -2
USP29Q9HBJ7 AL121890.1-201ENST00000435457 205 ntBASIC2.58□□□□□ -2
USP29Q9HBJ7 AC004386.2-201ENST00000441858 148 ntBASIC2.58□□□□□ -2
USP29Q9HBJ7 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.58□□□□□ -2
USP29Q9HBJ7 PCNPP5-201ENST00000452246 481 ntBASIC2.58□□□□□ -2
USP29Q9HBJ7 AC098869.1-201ENST00000481627 292 ntBASIC2.58□□□□□ -2
USP29Q9HBJ7 SNORA40.9-201ENST00000515895 93 ntBASIC2.58□□□□□ -2
USP29Q9HBJ7 Y_RNA.668-201ENST00000516233 93 ntBASIC2.58□□□□□ -2
USP29Q9HBJ7 RNA5SP24-201ENST00000516478 95 ntBASIC2.58□□□□□ -2
USP29Q9HBJ7 Y_RNA.683-201ENST00000516508 93 ntBASIC2.58□□□□□ -2
USP29Q9HBJ7 Y_RNA.713-201ENST00000517013 96 ntBASIC2.58□□□□□ -2
USP29Q9HBJ7 AC109329.2-201ENST00000519658 482 ntBASIC2.58□□□□□ -2
USP29Q9HBJ7 AL670379.2-201ENST00000604983 252 ntBASIC2.58□□□□□ -2
USP29Q9HBJ7 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.58□□□□□ -2
USP29Q9HBJ7 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.58□□□□□ -2
USP29Q9HBJ7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
USP29Q9HBJ7 AC135776.4-201ENST00000624300 1904 ntBASIC2.58□□□□□ -2
USP29Q9HBJ7 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
USP29Q9HBJ7 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
USP29Q9HBJ7 RNU6-505P-201ENST00000384427 107 ntBASIC2.57□□□□□ -2
USP29Q9HBJ7 MIR95-201ENST00000385072 81 ntBASIC2.57□□□□□ -2
USP29Q9HBJ7 MT-TW-201ENST00000387382 68 ntBASIC2.57□□□□□ -2
USP29Q9HBJ7 RNU6-220P-201ENST00000390919 107 ntBASIC2.57□□□□□ -2
USP29Q9HBJ7 Y_RNA.595-201ENST00000410403 105 ntBASIC2.57□□□□□ -2
USP29Q9HBJ7 RNA5SP504-201ENST00000410676 117 ntBASIC2.57□□□□□ -2
USP29Q9HBJ7 ELOCP21-201ENST00000412558 336 ntBASIC2.57□□□□□ -2
USP29Q9HBJ7 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.57□□□□□ -2
USP29Q9HBJ7 RPS12P2-201ENST00000439728 269 ntBASIC2.57□□□□□ -2
USP29Q9HBJ7 IFNA11P-201ENST00000446352 526 ntBASIC2.57□□□□□ -2
USP29Q9HBJ7 YWHAEP4-201ENST00000505390 198 ntBASIC2.57□□□□□ -2
USP29Q9HBJ7 SNORA31.11-201ENST00000516528 139 ntBASIC2.57□□□□□ -2
USP29Q9HBJ7 RPPH1-2P-201ENST00000516688 293 ntBASIC2.57□□□□□ -2
USP29Q9HBJ7 RNU2-44P-201ENST00000516795 194 ntBASIC2.57□□□□□ -2
USP29Q9HBJ7 HSPE1P18-201ENST00000517602 280 ntBASIC2.57□□□□□ -2
USP29Q9HBJ7 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.57□□□□□ -2
USP29Q9HBJ7 AP003733.2-201ENST00000529409 171 ntBASIC2.57□□□□□ -2
USP29Q9HBJ7 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.57□□□□□ -2
USP29Q9HBJ7 RRN3P3-201ENST00000549207 578 ntBASIC2.57□□□□□ -2
USP29Q9HBJ7 AC233702.2-202ENST00000562547 291 ntBASIC2.57□□□□□ -2
USP29Q9HBJ7 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.57□□□□□ -2
USP29Q9HBJ7 MIR4423-201ENST00000580922 80 ntBASIC2.57□□□□□ -2
USP29Q9HBJ7 MIR4300-201ENST00000581016 96 ntBASIC2.57□□□□□ -2
USP29Q9HBJ7 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.57□□□□□ -2
USP29Q9HBJ7 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.57□□□□□ -2
USP29Q9HBJ7 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.57□□□□□ -2
USP29Q9HBJ7 AC064859.1-201ENST00000624741 174 ntBASIC2.57□□□□□ -2
USP29Q9HBJ7 AC090517.3-201ENST00000625170 141 ntBASIC2.57□□□□□ -2
USP29Q9HBJ7 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.57□□□□□ -2
USP29Q9HBJ7 LINC02555-201ENST00000563933 1951 ntBASIC2.57□□□□□ -2
USP29Q9HBJ7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.57□□□□□ -2
USP29Q9HBJ7 RNA5SP432-201ENST00000362480 116 ntBASIC2.56□□□□□ -2
USP29Q9HBJ7 Y_RNA.376-201ENST00000365638 108 ntBASIC2.56□□□□□ -2
USP29Q9HBJ7 SNORD63-201ENST00000384262 68 ntBASIC2.56□□□□□ -2
USP29Q9HBJ7 SNORA67.2-201ENST00000384300 149 ntBASIC2.56□□□□□ -2
USP29Q9HBJ7 Y_RNA.556-201ENST00000384677 113 ntBASIC2.56□□□□□ -2
USP29Q9HBJ7 MIR27B-201ENST00000385129 97 ntBASIC2.56□□□□□ -2
USP29Q9HBJ7 MIR320B2-201ENST00000408479 138 ntBASIC2.56□□□□□ -2
USP29Q9HBJ7 RNU2-20P-201ENST00000410425 191 ntBASIC2.56□□□□□ -2
USP29Q9HBJ7 RN7SKP192-201ENST00000411291 327 ntBASIC2.56□□□□□ -2
USP29Q9HBJ7 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.56□□□□□ -2
USP29Q9HBJ7 AC009237.7-201ENST00000447357 229 ntBASIC2.56□□□□□ -2
USP29Q9HBJ7 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.56□□□□□ -2
USP29Q9HBJ7 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.56□□□□□ -2
USP29Q9HBJ7 RNU6-344P-201ENST00000516635 111 ntBASIC2.56□□□□□ -2
USP29Q9HBJ7 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.56□□□□□ -2
USP29Q9HBJ7 AC018630.3-201ENST00000542637 96 ntBASIC2.56□□□□□ -2
USP29Q9HBJ7 U4.3-201ENST00000621047 82 ntBASIC2.56□□□□□ -2
USP29Q9HBJ7 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.56□□□□□ -2
USP29Q9HBJ7 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
USP29Q9HBJ7 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.56□□□□□ -2
USP29Q9HBJ7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
USP29Q9HBJ7 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.55□□□□□ -2
USP29Q9HBJ7 snoU2_19.2-201ENST00000363024 80 ntBASIC2.55□□□□□ -2
USP29Q9HBJ7 RNU6-702P-201ENST00000364982 107 ntBASIC2.55□□□□□ -2
USP29Q9HBJ7 RNU6-937P-201ENST00000384325 106 ntBASIC2.55□□□□□ -2
USP29Q9HBJ7 Y_RNA.518-201ENST00000384552 113 ntBASIC2.55□□□□□ -2
USP29Q9HBJ7 MIR215-201ENST00000384858 110 ntBASIC2.55□□□□□ -2
USP29Q9HBJ7 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.55□□□□□ -2
USP29Q9HBJ7 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.55□□□□□ -2
USP29Q9HBJ7 CBX3P6-201ENST00000430257 527 ntBASIC2.55□□□□□ -2
USP29Q9HBJ7 AC005002.2-201ENST00000438228 269 ntBASIC2.55□□□□□ -2
USP29Q9HBJ7 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.55□□□□□ -2
USP29Q9HBJ7 UBL5P3-201ENST00000475112 231 ntBASIC2.55□□□□□ -2
USP29Q9HBJ7 AC074133.1-201ENST00000515696 183 ntBASIC2.55□□□□□ -2
USP29Q9HBJ7 RNU6-408P-201ENST00000515910 100 ntBASIC2.55□□□□□ -2
USP29Q9HBJ7 RNU6-586P-201ENST00000517265 104 ntBASIC2.55□□□□□ -2
USP29Q9HBJ7 CYCSP23-201ENST00000519781 313 ntBASIC2.55□□□□□ -2
USP29Q9HBJ7 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.55□□□□□ -2
USP29Q9HBJ7 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.55□□□□□ -2
USP29Q9HBJ7 MIR4446-201ENST00000578505 67 ntBASIC2.55□□□□□ -2
USP29Q9HBJ7 SNORD53-201ENST00000579969 78 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms