Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.11□□□□□ -2.07
POLR1BQ9H9Y6 MTCO3P10-201ENST00000455912 772 ntBASIC2.11□□□□□ -2.07
POLR1BQ9H9Y6 AC010531.2-201ENST00000465012 153 ntBASIC2.11□□□□□ -2.07
POLR1BQ9H9Y6 HMGN2P9-201ENST00000476875 229 ntBASIC2.11□□□□□ -2.07
POLR1BQ9H9Y6 RPS27P21-201ENST00000486977 252 ntBASIC2.11□□□□□ -2.07
POLR1BQ9H9Y6 RNU7-4P-201ENST00000516961 62 ntBASIC2.11□□□□□ -2.07
POLR1BQ9H9Y6 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.11□□□□□ -2.07
POLR1BQ9H9Y6 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.11□□□□□ -2.07
POLR1BQ9H9Y6 U1.36-201ENST00000620684 176 ntBASIC2.11□□□□□ -2.07
POLR1BQ9H9Y6 MIR6766-201ENST00000622641 72 ntBASIC2.11□□□□□ -2.07
POLR1BQ9H9Y6 AL078596.1-201ENST00000624856 447 ntBASIC2.11□□□□□ -2.07
POLR1BQ9H9Y6 MTND4LP32-201ENST00000636111 270 ntBASIC2.11□□□□□ -2.07
POLR1BQ9H9Y6 AC112487.2-201ENST00000637950 304 ntBASIC2.11□□□□□ -2.07
POLR1BQ9H9Y6 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
POLR1BQ9H9Y6 MTND4P1-201ENST00000457501 1466 ntBASIC2.11□□□□□ -2.07
POLR1BQ9H9Y6 MTND5P16-201ENST00000460269 1703 ntBASIC2.11□□□□□ -2.07
POLR1BQ9H9Y6 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.1□□□□□ -2.07
POLR1BQ9H9Y6 RNU4-73P-201ENST00000363164 141 ntBASIC2.1□□□□□ -2.07
POLR1BQ9H9Y6 Y_RNA.187-201ENST00000363918 113 ntBASIC2.1□□□□□ -2.07
POLR1BQ9H9Y6 Y_RNA.238-201ENST00000364441 102 ntBASIC2.1□□□□□ -2.07
POLR1BQ9H9Y6 RNA5SP138-201ENST00000365098 114 ntBASIC2.1□□□□□ -2.07
POLR1BQ9H9Y6 RNU6-975P-201ENST00000384296 105 ntBASIC2.1□□□□□ -2.07
POLR1BQ9H9Y6 RNU6-1235P-201ENST00000384559 107 ntBASIC2.1□□□□□ -2.07
POLR1BQ9H9Y6 MIR17-201ENST00000385012 84 ntBASIC2.1□□□□□ -2.07
POLR1BQ9H9Y6 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
POLR1BQ9H9Y6 RNU11-3P-201ENST00000391111 133 ntBASIC2.1□□□□□ -2.07
POLR1BQ9H9Y6 SNORA26.9-201ENST00000391322 122 ntBASIC2.1□□□□□ -2.07
POLR1BQ9H9Y6 RNA5SP450-201ENST00000411206 102 ntBASIC2.1□□□□□ -2.07
POLR1BQ9H9Y6 BX510359.4-201ENST00000423750 193 ntBASIC2.1□□□□□ -2.07
POLR1BQ9H9Y6 AC139712.2-201ENST00000424302 339 ntBASIC2.1□□□□□ -2.07
POLR1BQ9H9Y6 EIF1P2-201ENST00000428233 350 ntBASIC2.1□□□□□ -2.07
POLR1BQ9H9Y6 AC092423.1-201ENST00000430165 186 ntBASIC2.1□□□□□ -2.07
POLR1BQ9H9Y6 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.1□□□□□ -2.07
POLR1BQ9H9Y6 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.1□□□□□ -2.07
POLR1BQ9H9Y6 RNU6-498P-201ENST00000459468 107 ntBASIC2.1□□□□□ -2.07
POLR1BQ9H9Y6 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.1□□□□□ -2.07
POLR1BQ9H9Y6 RNA5SP200-201ENST00000516360 103 ntBASIC2.1□□□□□ -2.07
POLR1BQ9H9Y6 RNU6-295P-201ENST00000516901 104 ntBASIC2.1□□□□□ -2.07
POLR1BQ9H9Y6 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.1□□□□□ -2.07
POLR1BQ9H9Y6 UBL5P4-201ENST00000562584 236 ntBASIC2.1□□□□□ -2.07
POLR1BQ9H9Y6 MIR3169-201ENST00000578032 83 ntBASIC2.1□□□□□ -2.07
POLR1BQ9H9Y6 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.1□□□□□ -2.07
POLR1BQ9H9Y6 AC010999.1-201ENST00000611856 324 ntBASIC2.1□□□□□ -2.07
POLR1BQ9H9Y6 AC005296.1-201ENST00000616145 209 ntBASIC2.1□□□□□ -2.07
POLR1BQ9H9Y6 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.1□□□□□ -2.07
POLR1BQ9H9Y6 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
POLR1BQ9H9Y6 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
POLR1BQ9H9Y6 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
POLR1BQ9H9Y6 RNU6-1305P-201ENST00000364353 104 ntBASIC2.09□□□□□ -2.07
POLR1BQ9H9Y6 SNORD114-6-201ENST00000364393 72 ntBASIC2.09□□□□□ -2.07
POLR1BQ9H9Y6 RNU6-99P-201ENST00000364721 107 ntBASIC2.09□□□□□ -2.07
POLR1BQ9H9Y6 RNU5E-4P-201ENST00000364931 120 ntBASIC2.09□□□□□ -2.07
POLR1BQ9H9Y6 RNU6-867P-201ENST00000364956 107 ntBASIC2.09□□□□□ -2.07
POLR1BQ9H9Y6 HMGN2P38-201ENST00000423806 265 ntBASIC2.09□□□□□ -2.07
POLR1BQ9H9Y6 AC099799.1-201ENST00000439809 192 ntBASIC2.09□□□□□ -2.07
POLR1BQ9H9Y6 MIR2053-201ENST00000459295 91 ntBASIC2.09□□□□□ -2.07
POLR1BQ9H9Y6 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.09□□□□□ -2.07
POLR1BQ9H9Y6 RNU6-856P-201ENST00000516959 98 ntBASIC2.09□□□□□ -2.07
POLR1BQ9H9Y6 RAB11AP2-201ENST00000545905 639 ntBASIC2.09□□□□□ -2.07
POLR1BQ9H9Y6 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.09□□□□□ -2.07
POLR1BQ9H9Y6 MIR5695-201ENST00000579717 85 ntBASIC2.09□□□□□ -2.07
POLR1BQ9H9Y6 AC005786.1-201ENST00000588553 154 ntBASIC2.09□□□□□ -2.07
POLR1BQ9H9Y6 AL117336.2-201ENST00000602435 335 ntBASIC2.09□□□□□ -2.07
POLR1BQ9H9Y6 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.09□□□□□ -2.08
POLR1BQ9H9Y6 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
POLR1BQ9H9Y6 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
POLR1BQ9H9Y6 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
POLR1BQ9H9Y6 Y_RNA.67-201ENST00000362870 100 ntBASIC2.08□□□□□ -2.08
POLR1BQ9H9Y6 Y_RNA.146-201ENST00000363549 102 ntBASIC2.08□□□□□ -2.08
POLR1BQ9H9Y6 U3.8-201ENST00000363675 217 ntBASIC2.08□□□□□ -2.08
POLR1BQ9H9Y6 Y_RNA.315-201ENST00000365117 102 ntBASIC2.08□□□□□ -2.08
POLR1BQ9H9Y6 RNU6-1040P-201ENST00000383974 107 ntBASIC2.08□□□□□ -2.08
POLR1BQ9H9Y6 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.08□□□□□ -2.08
POLR1BQ9H9Y6 U8.13-201ENST00000390842 128 ntBASIC2.08□□□□□ -2.08
POLR1BQ9H9Y6 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
POLR1BQ9H9Y6 AL033519.2-201ENST00000403958 392 ntBASIC2.08□□□□□ -2.08
POLR1BQ9H9Y6 RNU6-1156P-201ENST00000410365 100 ntBASIC2.08□□□□□ -2.08
POLR1BQ9H9Y6 AL353689.1-201ENST00000438895 199 ntBASIC2.08□□□□□ -2.08
POLR1BQ9H9Y6 AC007677.1-201ENST00000445757 515 ntBASIC2.08□□□□□ -2.08
POLR1BQ9H9Y6 RPL23AP7-203ENST00000449021 469 ntBASIC2.08□□□□□ -2.08
POLR1BQ9H9Y6 RNU7-87P-201ENST00000459343 62 ntBASIC2.08□□□□□ -2.08
POLR1BQ9H9Y6 AC091179.3-201ENST00000474761 144 ntBASIC2.08□□□□□ -2.08
POLR1BQ9H9Y6 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.08□□□□□ -2.08
POLR1BQ9H9Y6 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.08□□□□□ -2.08
POLR1BQ9H9Y6 Y_RNA.683-201ENST00000516508 93 ntBASIC2.08□□□□□ -2.08
POLR1BQ9H9Y6 SCARNA16.3-201ENST00000516595 184 ntBASIC2.08□□□□□ -2.08
POLR1BQ9H9Y6 AC144568.1-201ENST00000520139 137 ntBASIC2.08□□□□□ -2.08
POLR1BQ9H9Y6 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.08□□□□□ -2.08
POLR1BQ9H9Y6 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.08□□□□□ -2.08
POLR1BQ9H9Y6 AC084781.2-201ENST00000615568 161 ntBASIC2.08□□□□□ -2.08
POLR1BQ9H9Y6 AL590240.4-201ENST00000616908 390 ntBASIC2.08□□□□□ -2.08
POLR1BQ9H9Y6 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
POLR1BQ9H9Y6 RNU6-874P-201ENST00000362390 105 ntBASIC2.07□□□□□ -2.08
POLR1BQ9H9Y6 RNU6-222P-201ENST00000362438 107 ntBASIC2.07□□□□□ -2.08
POLR1BQ9H9Y6 Y_RNA.338-201ENST00000365320 114 ntBASIC2.07□□□□□ -2.08
POLR1BQ9H9Y6 Y_RNA.557-201ENST00000384680 107 ntBASIC2.07□□□□□ -2.08
POLR1BQ9H9Y6 AL023284.1-201ENST00000403956 276 ntBASIC2.07□□□□□ -2.08
POLR1BQ9H9Y6 AL512604.1-201ENST00000404812 257 ntBASIC2.07□□□□□ -2.08
POLR1BQ9H9Y6 RNA5SP247-201ENST00000411181 105 ntBASIC2.07□□□□□ -2.08
POLR1BQ9H9Y6 RNU6-1304P-201ENST00000411374 106 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms