Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 RPL36AP48-201ENST00000485521 314 ntBASIC2.93□□□□□ -1.94
SEC61A2Q9H9S3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.93□□□□□ -1.94
SEC61A2Q9H9S3 RNU7-121P-201ENST00000516604 62 ntBASIC2.93□□□□□ -1.94
SEC61A2Q9H9S3 MIR3944-201ENST00000581277 108 ntBASIC2.93□□□□□ -1.94
SEC61A2Q9H9S3 MIR4276-201ENST00000584832 70 ntBASIC2.93□□□□□ -1.94
SEC61A2Q9H9S3 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.93□□□□□ -1.94
SEC61A2Q9H9S3 AL391813.1-201ENST00000603098 260 ntBASIC2.93□□□□□ -1.94
SEC61A2Q9H9S3 AC007179.3-201ENST00000604976 235 ntBASIC2.93□□□□□ -1.94
SEC61A2Q9H9S3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.93□□□□□ -1.94
SEC61A2Q9H9S3 AC073476.4-201ENST00000628409 72 ntBASIC2.93□□□□□ -1.94
SEC61A2Q9H9S3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SEC61A2Q9H9S3 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.93□□□□□ -1.94
SEC61A2Q9H9S3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.93□□□□□ -1.94
SEC61A2Q9H9S3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
SEC61A2Q9H9S3 Y_RNA.172-201ENST00000363765 102 ntBASIC2.92□□□□□ -1.94
SEC61A2Q9H9S3 Y_RNA.310-201ENST00000365063 113 ntBASIC2.92□□□□□ -1.94
SEC61A2Q9H9S3 Y_RNA.368-201ENST00000365547 113 ntBASIC2.92□□□□□ -1.94
SEC61A2Q9H9S3 MIR34B-201ENST00000385076 84 ntBASIC2.92□□□□□ -1.94
SEC61A2Q9H9S3 MT-TT-201ENST00000387460 66 ntBASIC2.92□□□□□ -1.94
SEC61A2Q9H9S3 SNORA40-201ENST00000388090 126 ntBASIC2.92□□□□□ -1.94
SEC61A2Q9H9S3 AC006461.1-201ENST00000412637 326 ntBASIC2.92□□□□□ -1.94
SEC61A2Q9H9S3 AL365496.1-201ENST00000426885 215 ntBASIC2.92□□□□□ -1.94
SEC61A2Q9H9S3 AC005326.1-201ENST00000429197 123 ntBASIC2.92□□□□□ -1.94
SEC61A2Q9H9S3 AC107027.2-201ENST00000512197 115 ntBASIC2.92□□□□□ -1.94
SEC61A2Q9H9S3 RNU6-971P-201ENST00000516920 106 ntBASIC2.92□□□□□ -1.94
SEC61A2Q9H9S3 AC245166.1-201ENST00000521012 253 ntBASIC2.92□□□□□ -1.94
SEC61A2Q9H9S3 AC109810.1-201ENST00000534066 224 ntBASIC2.92□□□□□ -1.94
SEC61A2Q9H9S3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.92□□□□□ -1.94
SEC61A2Q9H9S3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.92□□□□□ -1.94
SEC61A2Q9H9S3 AC008873.1-201ENST00000625051 138 ntBASIC2.92□□□□□ -1.94
SEC61A2Q9H9S3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.92□□□□□ -1.94
SEC61A2Q9H9S3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SEC61A2Q9H9S3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SEC61A2Q9H9S3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
SEC61A2Q9H9S3 AC091152.2-201ENST00000591628 2569 ntBASIC2.91□□□□□ -1.94
SEC61A2Q9H9S3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
SEC61A2Q9H9S3 RNU1-70P-201ENST00000362618 164 ntBASIC2.91□□□□□ -1.94
SEC61A2Q9H9S3 RNU6-1205P-201ENST00000363625 106 ntBASIC2.91□□□□□ -1.94
SEC61A2Q9H9S3 RNA5SP72-201ENST00000364442 117 ntBASIC2.91□□□□□ -1.94
SEC61A2Q9H9S3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SEC61A2Q9H9S3 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.91□□□□□ -1.94
SEC61A2Q9H9S3 MTND4LP9-201ENST00000427694 174 ntBASIC2.91□□□□□ -1.94
SEC61A2Q9H9S3 Z98742.2-201ENST00000431564 187 ntBASIC2.91□□□□□ -1.94
SEC61A2Q9H9S3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.91□□□□□ -1.94
SEC61A2Q9H9S3 Z75741.1-201ENST00000446793 314 ntBASIC2.91□□□□□ -1.94
SEC61A2Q9H9S3 AL121914.1-201ENST00000450188 156 ntBASIC2.91□□□□□ -1.94
SEC61A2Q9H9S3 BX510359.1-201ENST00000456973 237 ntBASIC2.91□□□□□ -1.94
SEC61A2Q9H9S3 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.91□□□□□ -1.94
SEC61A2Q9H9S3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.91□□□□□ -1.94
SEC61A2Q9H9S3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.91□□□□□ -1.94
SEC61A2Q9H9S3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.91□□□□□ -1.94
SEC61A2Q9H9S3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
SEC61A2Q9H9S3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.91□□□□□ -1.94
SEC61A2Q9H9S3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.94
SEC61A2Q9H9S3 AC008264.2-201ENST00000610193 3731 ntBASIC2.9□□□□□ -1.94
SEC61A2Q9H9S3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.9□□□□□ -1.94
SEC61A2Q9H9S3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
SEC61A2Q9H9S3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SEC61A2Q9H9S3 RNU6-199P-201ENST00000362954 107 ntBASIC2.9□□□□□ -1.95
SEC61A2Q9H9S3 U3.8-201ENST00000363675 217 ntBASIC2.9□□□□□ -1.95
SEC61A2Q9H9S3 Y_RNA.333-201ENST00000365274 102 ntBASIC2.9□□□□□ -1.95
SEC61A2Q9H9S3 MIR513C-201ENST00000401352 84 ntBASIC2.9□□□□□ -1.95
SEC61A2Q9H9S3 AL355497.1-201ENST00000406262 551 ntBASIC2.9□□□□□ -1.95
SEC61A2Q9H9S3 RPL30P13-201ENST00000418873 348 ntBASIC2.9□□□□□ -1.95
SEC61A2Q9H9S3 HSPE1P21-201ENST00000438283 308 ntBASIC2.9□□□□□ -1.95
SEC61A2Q9H9S3 AL137159.1-201ENST00000452808 512 ntBASIC2.9□□□□□ -1.95
SEC61A2Q9H9S3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.9□□□□□ -1.95
SEC61A2Q9H9S3 AL031183.1-201ENST00000457667 207 ntBASIC2.9□□□□□ -1.95
SEC61A2Q9H9S3 RNU6-1211P-201ENST00000459179 105 ntBASIC2.9□□□□□ -1.95
SEC61A2Q9H9S3 RPS29P2-201ENST00000479278 136 ntBASIC2.9□□□□□ -1.95
SEC61A2Q9H9S3 MIR449C-201ENST00000516047 92 ntBASIC2.9□□□□□ -1.95
SEC61A2Q9H9S3 DNAJC19P2-201ENST00000593340 302 ntBASIC2.9□□□□□ -1.95
SEC61A2Q9H9S3 AC096577.2-201ENST00000611455 153 ntBASIC2.9□□□□□ -1.95
SEC61A2Q9H9S3 Z83843.1-201ENST00000604070 3685 ntBASIC2.9□□□□□ -1.95
SEC61A2Q9H9S3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.9□□□□□ -1.95
SEC61A2Q9H9S3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SEC61A2Q9H9S3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SEC61A2Q9H9S3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SEC61A2Q9H9S3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SEC61A2Q9H9S3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
SEC61A2Q9H9S3 Y_RNA.124-201ENST00000363339 93 ntBASIC2.89□□□□□ -1.95
SEC61A2Q9H9S3 Y_RNA.456-201ENST00000384232 111 ntBASIC2.89□□□□□ -1.95
SEC61A2Q9H9S3 SNORD37.2-201ENST00000391075 66 ntBASIC2.89□□□□□ -1.95
SEC61A2Q9H9S3 SNORA48.5-201ENST00000391143 135 ntBASIC2.89□□□□□ -1.95
SEC61A2Q9H9S3 SNORA48.8-201ENST00000391324 134 ntBASIC2.89□□□□□ -1.95
SEC61A2Q9H9S3 RNU6-383P-201ENST00000410864 94 ntBASIC2.89□□□□□ -1.95
SEC61A2Q9H9S3 AL139281.1-201ENST00000422120 335 ntBASIC2.89□□□□□ -1.95
SEC61A2Q9H9S3 AC115115.1-201ENST00000449927 248 ntBASIC2.89□□□□□ -1.95
SEC61A2Q9H9S3 SRIP1-201ENST00000489235 288 ntBASIC2.89□□□□□ -1.95
SEC61A2Q9H9S3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.89□□□□□ -1.95
SEC61A2Q9H9S3 RNA5SP385-201ENST00000515947 110 ntBASIC2.89□□□□□ -1.95
SEC61A2Q9H9S3 RNU6-561P-201ENST00000516222 102 ntBASIC2.89□□□□□ -1.95
SEC61A2Q9H9S3 RNU6-1098P-201ENST00000516772 96 ntBASIC2.89□□□□□ -1.95
SEC61A2Q9H9S3 RNU6-1234P-201ENST00000516877 103 ntBASIC2.89□□□□□ -1.95
SEC61A2Q9H9S3 MIR4506-201ENST00000584693 77 ntBASIC2.89□□□□□ -1.95
SEC61A2Q9H9S3 AL670379.2-201ENST00000604983 252 ntBASIC2.89□□□□□ -1.95
SEC61A2Q9H9S3 AC025754.2-201ENST00000606491 432 ntBASIC2.89□□□□□ -1.95
SEC61A2Q9H9S3 MIR7112-201ENST00000616126 65 ntBASIC2.89□□□□□ -1.95
SEC61A2Q9H9S3 AC090517.3-201ENST00000625170 141 ntBASIC2.89□□□□□ -1.95
SEC61A2Q9H9S3 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 183.4 ms