Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.81□□□□□ -2.12
SNX25Q9H3E2 RNU6-975P-201ENST00000384296 105 ntBASIC1.81□□□□□ -2.12
SNX25Q9H3E2 MIR586-201ENST00000385035 97 ntBASIC1.81□□□□□ -2.12
SNX25Q9H3E2 AC016717.1-201ENST00000448918 286 ntBASIC1.81□□□□□ -2.12
SNX25Q9H3E2 MTND4P17-201ENST00000470444 350 ntBASIC1.81□□□□□ -2.12
SNX25Q9H3E2 RPL7P42-201ENST00000481005 679 ntBASIC1.81□□□□□ -2.12
SNX25Q9H3E2 Y_RNA.708-201ENST00000516950 96 ntBASIC1.81□□□□□ -2.12
SNX25Q9H3E2 RNU6-856P-201ENST00000516959 98 ntBASIC1.81□□□□□ -2.12
SNX25Q9H3E2 AC022254.1-201ENST00000567857 235 ntBASIC1.81□□□□□ -2.12
SNX25Q9H3E2 MIR4753-201ENST00000585119 83 ntBASIC1.81□□□□□ -2.12
SNX25Q9H3E2 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.81□□□□□ -2.12
SNX25Q9H3E2 7SK.7-201ENST00000603504 247 ntBASIC1.81□□□□□ -2.12
SNX25Q9H3E2 AC005034.5-201ENST00000604219 466 ntBASIC1.81□□□□□ -2.12
SNX25Q9H3E2 AL355802.3-201ENST00000607571 545 ntBASIC1.81□□□□□ -2.12
SNX25Q9H3E2 AL355073.2-201ENST00000612106 557 ntBASIC1.81□□□□□ -2.12
SNX25Q9H3E2 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.81□□□□□ -2.12
SNX25Q9H3E2 TPTEP1-208ENST00000636884 213 ntBASIC1.81□□□□□ -2.12
SNX25Q9H3E2 AL159152.1-201ENST00000635019 2587 ntBASIC1.81□□□□□ -2.12
SNX25Q9H3E2 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
SNX25Q9H3E2 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SNX25Q9H3E2 RNU6-873P-201ENST00000363833 107 ntBASIC1.8□□□□□ -2.12
SNX25Q9H3E2 RNU6-1305P-201ENST00000364353 104 ntBASIC1.8□□□□□ -2.12
SNX25Q9H3E2 RNA5SP190-201ENST00000365222 118 ntBASIC1.8□□□□□ -2.12
SNX25Q9H3E2 RNU6-541P-201ENST00000384709 110 ntBASIC1.8□□□□□ -2.12
SNX25Q9H3E2 RNU6-331P-201ENST00000384724 107 ntBASIC1.8□□□□□ -2.12
SNX25Q9H3E2 MIR10B-201ENST00000385011 110 ntBASIC1.8□□□□□ -2.12
SNX25Q9H3E2 RNA5SP213-201ENST00000391031 106 ntBASIC1.8□□□□□ -2.12
SNX25Q9H3E2 AL356432.1-201ENST00000405809 419 ntBASIC1.8□□□□□ -2.12
SNX25Q9H3E2 MIR320B2-201ENST00000408479 138 ntBASIC1.8□□□□□ -2.12
SNX25Q9H3E2 RNA5SP100-201ENST00000410903 110 ntBASIC1.8□□□□□ -2.12
SNX25Q9H3E2 RNA5SP59-201ENST00000410922 110 ntBASIC1.8□□□□□ -2.12
SNX25Q9H3E2 AC009310.1-201ENST00000414414 451 ntBASIC1.8□□□□□ -2.12
SNX25Q9H3E2 AC060773.1-201ENST00000421698 310 ntBASIC1.8□□□□□ -2.12
SNX25Q9H3E2 AC099677.2-201ENST00000436385 175 ntBASIC1.8□□□□□ -2.12
SNX25Q9H3E2 AC098614.3-201ENST00000438957 440 ntBASIC1.8□□□□□ -2.12
SNX25Q9H3E2 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.8□□□□□ -2.12
SNX25Q9H3E2 RNA5SP57-201ENST00000459463 123 ntBASIC1.8□□□□□ -2.12
SNX25Q9H3E2 AP000870.1-201ENST00000472927 406 ntBASIC1.8□□□□□ -2.12
SNX25Q9H3E2 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.8□□□□□ -2.12
SNX25Q9H3E2 AC097473.1-201ENST00000508142 408 ntBASIC1.8□□□□□ -2.12
SNX25Q9H3E2 SNORA25.14-201ENST00000516481 132 ntBASIC1.8□□□□□ -2.12
SNX25Q9H3E2 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.8□□□□□ -2.12
SNX25Q9H3E2 RNU1-117P-201ENST00000517041 158 ntBASIC1.8□□□□□ -2.12
SNX25Q9H3E2 AC134698.4-201ENST00000523451 826 ntBASIC1.8□□□□□ -2.12
SNX25Q9H3E2 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.8□□□□□ -2.12
SNX25Q9H3E2 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.8□□□□□ -2.12
SNX25Q9H3E2 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.8□□□□□ -2.12
SNX25Q9H3E2 AK6P2-201ENST00000549020 471 ntBASIC1.8□□□□□ -2.12
SNX25Q9H3E2 SUB1P4-201ENST00000566062 339 ntBASIC1.8□□□□□ -2.12
SNX25Q9H3E2 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.8□□□□□ -2.12
SNX25Q9H3E2 MIR3683-201ENST00000580847 82 ntBASIC1.8□□□□□ -2.12
SNX25Q9H3E2 MIR3124-201ENST00000582636 67 ntBASIC1.8□□□□□ -2.12
SNX25Q9H3E2 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.8□□□□□ -2.12
SNX25Q9H3E2 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.8□□□□□ -2.12
SNX25Q9H3E2 AC083806.3-201ENST00000614016 455 ntBASIC1.8□□□□□ -2.12
SNX25Q9H3E2 AL353997.5-201ENST00000618886 171 ntBASIC1.8□□□□□ -2.12
SNX25Q9H3E2 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.8□□□□□ -2.12
SNX25Q9H3E2 AL359697.1-201ENST00000624879 587 ntBASIC1.8□□□□□ -2.12
SNX25Q9H3E2 AC008873.1-201ENST00000625051 138 ntBASIC1.8□□□□□ -2.12
SNX25Q9H3E2 RNU1-62P-201ENST00000362599 164 ntBASIC1.79□□□□□ -2.12
SNX25Q9H3E2 Y_RNA.474-201ENST00000384341 102 ntBASIC1.79□□□□□ -2.12
SNX25Q9H3E2 SNORA75.4-201ENST00000391278 119 ntBASIC1.79□□□□□ -2.12
SNX25Q9H3E2 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.79□□□□□ -2.12
SNX25Q9H3E2 AL117342.1-201ENST00000404861 406 ntBASIC1.79□□□□□ -2.12
SNX25Q9H3E2 MTND3P23-201ENST00000431980 347 ntBASIC1.79□□□□□ -2.12
SNX25Q9H3E2 RNU6-948P-201ENST00000516374 107 ntBASIC1.79□□□□□ -2.12
SNX25Q9H3E2 RNU2-34P-201ENST00000516534 121 ntBASIC1.79□□□□□ -2.12
SNX25Q9H3E2 AC010900.2-201ENST00000604508 210 ntBASIC1.79□□□□□ -2.12
SNX25Q9H3E2 AC016727.1-205ENST00000605437 569 ntBASIC1.79□□□□□ -2.12
SNX25Q9H3E2 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.79□□□□□ -2.12
SNX25Q9H3E2 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SNX25Q9H3E2 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
SNX25Q9H3E2 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SNX25Q9H3E2 RNU1-17P-201ENST00000363022 152 ntBASIC1.78□□□□□ -2.12
SNX25Q9H3E2 Y_RNA.303-201ENST00000364998 94 ntBASIC1.78□□□□□ -2.12
SNX25Q9H3E2 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.78□□□□□ -2.12
SNX25Q9H3E2 RPL23AP6-201ENST00000446637 472 ntBASIC1.78□□□□□ -2.12
SNX25Q9H3E2 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.78□□□□□ -2.12
SNX25Q9H3E2 RNU6-1213P-201ENST00000517075 94 ntBASIC1.78□□□□□ -2.12
SNX25Q9H3E2 AC105029.1-201ENST00000520250 669 ntBASIC1.78□□□□□ -2.12
SNX25Q9H3E2 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.78□□□□□ -2.12
SNX25Q9H3E2 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.78□□□□□ -2.12
SNX25Q9H3E2 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.78□□□□□ -2.12
SNX25Q9H3E2 AC099654.5-201ENST00000636479 350 ntBASIC1.78□□□□□ -2.12
SNX25Q9H3E2 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
SNX25Q9H3E2 RNU6-874P-201ENST00000362390 105 ntBASIC1.77□□□□□ -2.13
SNX25Q9H3E2 RNY1P16-201ENST00000363063 111 ntBASIC1.77□□□□□ -2.13
SNX25Q9H3E2 Y_RNA.106-201ENST00000363189 100 ntBASIC1.77□□□□□ -2.13
SNX25Q9H3E2 RNA5SP99-201ENST00000364020 114 ntBASIC1.77□□□□□ -2.13
SNX25Q9H3E2 RNU6-1235P-201ENST00000384559 107 ntBASIC1.77□□□□□ -2.13
SNX25Q9H3E2 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.77□□□□□ -2.13
SNX25Q9H3E2 RPS20P15-201ENST00000412792 311 ntBASIC1.77□□□□□ -2.13
SNX25Q9H3E2 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.77□□□□□ -2.13
SNX25Q9H3E2 USMG5P1-201ENST00000425964 177 ntBASIC1.77□□□□□ -2.13
SNX25Q9H3E2 AL353997.1-201ENST00000432936 108 ntBASIC1.77□□□□□ -2.13
SNX25Q9H3E2 ATP5J2P3-201ENST00000451550 258 ntBASIC1.77□□□□□ -2.13
SNX25Q9H3E2 SNORD13-201ENST00000459299 104 ntBASIC1.77□□□□□ -2.13
SNX25Q9H3E2 RNU6-498P-201ENST00000459468 107 ntBASIC1.77□□□□□ -2.13
SNX25Q9H3E2 RNU7-57P-201ENST00000459540 60 ntBASIC1.77□□□□□ -2.13
SNX25Q9H3E2 AC091179.3-201ENST00000474761 144 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 179.2 ms