Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 Y_RNA.700-201ENST00000516806 100 ntBASIC2.73□□□□□ -1.97
VPS16Q9H269 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.73□□□□□ -1.97
VPS16Q9H269 EIF4BP1-201ENST00000554881 351 ntBASIC2.73□□□□□ -1.97
VPS16Q9H269 CYP4A27P-201ENST00000567218 190 ntBASIC2.73□□□□□ -1.97
VPS16Q9H269 LARP7P3-201ENST00000579888 337 ntBASIC2.73□□□□□ -1.97
VPS16Q9H269 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.73□□□□□ -1.97
VPS16Q9H269 U2.14-201ENST00000615943 113 ntBASIC2.73□□□□□ -1.97
VPS16Q9H269 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
VPS16Q9H269 AC127459.3-201ENST00000624328 466 ntBASIC2.73□□□□□ -1.97
VPS16Q9H269 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.73□□□□□ -1.97
VPS16Q9H269 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.72□□□□□ -1.97
VPS16Q9H269 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VPS16Q9H269 RNU6-1159P-201ENST00000362933 107 ntBASIC2.72□□□□□ -1.97
VPS16Q9H269 RNU1-72P-201ENST00000362976 153 ntBASIC2.72□□□□□ -1.97
VPS16Q9H269 Y_RNA.150-201ENST00000363562 102 ntBASIC2.72□□□□□ -1.97
VPS16Q9H269 RNA5SP456-201ENST00000364002 114 ntBASIC2.72□□□□□ -1.97
VPS16Q9H269 RNA5SP240-201ENST00000365355 128 ntBASIC2.72□□□□□ -1.97
VPS16Q9H269 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VPS16Q9H269 SNORD63-201ENST00000384262 68 ntBASIC2.72□□□□□ -1.97
VPS16Q9H269 SUMO1P4-201ENST00000429430 302 ntBASIC2.72□□□□□ -1.97
VPS16Q9H269 AL445305.1-201ENST00000432577 575 ntBASIC2.72□□□□□ -1.97
VPS16Q9H269 CKS1BP2-201ENST00000497342 240 ntBASIC2.72□□□□□ -1.97
VPS16Q9H269 SERF1AP1-201ENST00000514575 187 ntBASIC2.72□□□□□ -1.97
VPS16Q9H269 RNU4-71P-201ENST00000516258 113 ntBASIC2.72□□□□□ -1.97
VPS16Q9H269 RNU6-182P-201ENST00000516970 105 ntBASIC2.72□□□□□ -1.97
VPS16Q9H269 UBL5P4-201ENST00000562584 236 ntBASIC2.72□□□□□ -1.97
VPS16Q9H269 AC090616.3-201ENST00000582184 217 ntBASIC2.72□□□□□ -1.97
VPS16Q9H269 AL078605.1-201ENST00000603529 500 ntBASIC2.72□□□□□ -1.97
VPS16Q9H269 BX284668.6-201ENST00000606899 438 ntBASIC2.72□□□□□ -1.97
VPS16Q9H269 AL137847.3-201ENST00000611521 109 ntBASIC2.72□□□□□ -1.97
VPS16Q9H269 AC004792.1-201ENST00000614523 137 ntBASIC2.72□□□□□ -1.97
VPS16Q9H269 AC069528.2-201ENST00000624849 1991 ntBASIC2.72□□□□□ -1.97
VPS16Q9H269 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
VPS16Q9H269 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
VPS16Q9H269 snoU2_19.1-201ENST00000362361 80 ntBASIC2.71□□□□□ -1.98
VPS16Q9H269 RNU6-859P-201ENST00000362728 107 ntBASIC2.71□□□□□ -1.98
VPS16Q9H269 SNORA80A-201ENST00000363922 136 ntBASIC2.71□□□□□ -1.98
VPS16Q9H269 RNU6-290P-201ENST00000365212 101 ntBASIC2.71□□□□□ -1.98
VPS16Q9H269 NDUFB4P4-201ENST00000404822 243 ntBASIC2.71□□□□□ -1.98
VPS16Q9H269 SNORD12B-201ENST00000410433 91 ntBASIC2.71□□□□□ -1.98
VPS16Q9H269 RNU2-63P-201ENST00000410792 194 ntBASIC2.71□□□□□ -1.98
VPS16Q9H269 RNU6-1001P-201ENST00000411265 100 ntBASIC2.71□□□□□ -1.98
VPS16Q9H269 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.71□□□□□ -1.98
VPS16Q9H269 WARS2P1-201ENST00000429678 537 ntBASIC2.71□□□□□ -1.98
VPS16Q9H269 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.71□□□□□ -1.98
VPS16Q9H269 RNU6-586P-201ENST00000517265 104 ntBASIC2.71□□□□□ -1.98
VPS16Q9H269 MIR4423-201ENST00000580922 80 ntBASIC2.71□□□□□ -1.98
VPS16Q9H269 AL713866.2-201ENST00000603579 219 ntBASIC2.71□□□□□ -1.98
VPS16Q9H269 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.71□□□□□ -1.98
VPS16Q9H269 AC090517.3-201ENST00000625170 141 ntBASIC2.71□□□□□ -1.98
VPS16Q9H269 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.71□□□□□ -1.98
VPS16Q9H269 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.71□□□□□ -1.98
VPS16Q9H269 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VPS16Q9H269 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VPS16Q9H269 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
VPS16Q9H269 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.7□□□□□ -1.98
VPS16Q9H269 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VPS16Q9H269 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
VPS16Q9H269 MIR21-201ENST00000362134 72 ntBASIC2.7□□□□□ -1.98
VPS16Q9H269 Y_RNA.29-201ENST00000362570 113 ntBASIC2.7□□□□□ -1.98
VPS16Q9H269 Y_RNA.76-201ENST00000362931 109 ntBASIC2.7□□□□□ -1.98
VPS16Q9H269 Y_RNA.200-201ENST00000364018 102 ntBASIC2.7□□□□□ -1.98
VPS16Q9H269 Y_RNA.319-201ENST00000365138 92 ntBASIC2.7□□□□□ -1.98
VPS16Q9H269 RNU1-51P-201ENST00000365345 176 ntBASIC2.7□□□□□ -1.98
VPS16Q9H269 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
VPS16Q9H269 RNU6-281P-201ENST00000384212 103 ntBASIC2.7□□□□□ -1.98
VPS16Q9H269 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
VPS16Q9H269 PCNPP3-201ENST00000393579 471 ntBASIC2.7□□□□□ -1.98
VPS16Q9H269 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
VPS16Q9H269 RNU4-30P-201ENST00000410245 143 ntBASIC2.7□□□□□ -1.98
VPS16Q9H269 AL161788.1-201ENST00000441805 169 ntBASIC2.7□□□□□ -1.98
VPS16Q9H269 AC090515.1-201ENST00000465295 476 ntBASIC2.7□□□□□ -1.98
VPS16Q9H269 MIR5695-201ENST00000579717 85 ntBASIC2.7□□□□□ -1.98
VPS16Q9H269 MIR7106-201ENST00000612419 65 ntBASIC2.7□□□□□ -1.98
VPS16Q9H269 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.7□□□□□ -1.98
VPS16Q9H269 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.7□□□□□ -1.98
VPS16Q9H269 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
VPS16Q9H269 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
VPS16Q9H269 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VPS16Q9H269 RNU4-15P-201ENST00000362613 141 ntBASIC2.69□□□□□ -1.98
VPS16Q9H269 RNU4-90P-201ENST00000362773 141 ntBASIC2.69□□□□□ -1.98
VPS16Q9H269 Y_RNA.180-201ENST00000363867 113 ntBASIC2.69□□□□□ -1.98
VPS16Q9H269 RNU6-961P-201ENST00000363893 105 ntBASIC2.69□□□□□ -1.98
VPS16Q9H269 MIR329-1-201ENST00000385028 80 ntBASIC2.69□□□□□ -1.98
VPS16Q9H269 RNU6-159P-201ENST00000391080 106 ntBASIC2.69□□□□□ -1.98
VPS16Q9H269 MIR1298-201ENST00000408783 112 ntBASIC2.69□□□□□ -1.98
VPS16Q9H269 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.69□□□□□ -1.98
VPS16Q9H269 snoU13.6-201ENST00000458785 104 ntBASIC2.69□□□□□ -1.98
VPS16Q9H269 RN7SKP49-201ENST00000516675 260 ntBASIC2.69□□□□□ -1.98
VPS16Q9H269 RNU6-58P-201ENST00000517143 103 ntBASIC2.69□□□□□ -1.98
VPS16Q9H269 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.69□□□□□ -1.98
VPS16Q9H269 AC005520.5-201ENST00000613926 164 ntBASIC2.69□□□□□ -1.98
VPS16Q9H269 AC005296.1-201ENST00000616145 209 ntBASIC2.69□□□□□ -1.98
VPS16Q9H269 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.69□□□□□ -1.98
VPS16Q9H269 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
VPS16Q9H269 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.68□□□□□ -1.98
VPS16Q9H269 RNU6-1145P-201ENST00000384246 107 ntBASIC2.68□□□□□ -1.98
VPS16Q9H269 RNU6-541P-201ENST00000384709 110 ntBASIC2.68□□□□□ -1.98
VPS16Q9H269 MIR27B-201ENST00000385129 97 ntBASIC2.68□□□□□ -1.98
VPS16Q9H269 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms