Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 SNORA38-201ENST00000363946 132 ntBASIC2.47□□□□□ -2.01
CDT1Q9H211 Y_RNA.276-201ENST00000364732 109 ntBASIC2.47□□□□□ -2.01
CDT1Q9H211 Y_RNA.447-201ENST00000384184 113 ntBASIC2.47□□□□□ -2.01
CDT1Q9H211 Y_RNA.461-201ENST00000384263 103 ntBASIC2.47□□□□□ -2.01
CDT1Q9H211 RNU6-378P-201ENST00000384324 107 ntBASIC2.47□□□□□ -2.01
CDT1Q9H211 MIR628-201ENST00000385229 95 ntBASIC2.47□□□□□ -2.01
CDT1Q9H211 RNU6-220P-201ENST00000390919 107 ntBASIC2.47□□□□□ -2.01
CDT1Q9H211 RN7SKP223-201ENST00000410582 62 ntBASIC2.47□□□□□ -2.01
CDT1Q9H211 RNU2-38P-201ENST00000410856 79 ntBASIC2.47□□□□□ -2.01
CDT1Q9H211 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.47□□□□□ -2.01
CDT1Q9H211 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.47□□□□□ -2.01
CDT1Q9H211 RNU7-26P-201ENST00000458980 63 ntBASIC2.47□□□□□ -2.01
CDT1Q9H211 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.47□□□□□ -2.01
CDT1Q9H211 AC145146.1-201ENST00000496370 254 ntBASIC2.47□□□□□ -2.01
CDT1Q9H211 AC067942.3-201ENST00000512025 362 ntBASIC2.47□□□□□ -2.01
CDT1Q9H211 RNU6-388P-201ENST00000517012 105 ntBASIC2.47□□□□□ -2.01
CDT1Q9H211 RNU6-389P-201ENST00000517048 105 ntBASIC2.47□□□□□ -2.01
CDT1Q9H211 AP003733.2-201ENST00000529409 171 ntBASIC2.47□□□□□ -2.01
CDT1Q9H211 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CDT1Q9H211 AC027288.2-201ENST00000553028 243 ntBASIC2.47□□□□□ -2.01
CDT1Q9H211 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.47□□□□□ -2.01
CDT1Q9H211 AL670379.2-201ENST00000604983 252 ntBASIC2.47□□□□□ -2.01
CDT1Q9H211 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.47□□□□□ -2.01
CDT1Q9H211 RNU1-76P-201ENST00000362903 159 ntBASIC2.46□□□□□ -2.02
CDT1Q9H211 Y_RNA.143-201ENST00000363520 106 ntBASIC2.46□□□□□ -2.02
CDT1Q9H211 Y_RNA.152-201ENST00000363578 100 ntBASIC2.46□□□□□ -2.02
CDT1Q9H211 Y_RNA.183-201ENST00000363882 113 ntBASIC2.46□□□□□ -2.02
CDT1Q9H211 SNORD115-32-201ENST00000364079 82 ntBASIC2.46□□□□□ -2.02
CDT1Q9H211 RNU6-926P-201ENST00000384075 107 ntBASIC2.46□□□□□ -2.02
CDT1Q9H211 RNU6-1026P-201ENST00000384465 108 ntBASIC2.46□□□□□ -2.02
CDT1Q9H211 RNU6-1072P-201ENST00000384703 107 ntBASIC2.46□□□□□ -2.02
CDT1Q9H211 RNU6-443P-201ENST00000384780 107 ntBASIC2.46□□□□□ -2.02
CDT1Q9H211 MIR208B-201ENST00000401172 77 ntBASIC2.46□□□□□ -2.02
CDT1Q9H211 AL079342.1-201ENST00000401460 267 ntBASIC2.46□□□□□ -2.02
CDT1Q9H211 RNA5SP201-201ENST00000410316 124 ntBASIC2.46□□□□□ -2.02
CDT1Q9H211 AL356320.1-201ENST00000429616 163 ntBASIC2.46□□□□□ -2.02
CDT1Q9H211 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.46□□□□□ -2.02
CDT1Q9H211 RNU6-1132P-201ENST00000459214 107 ntBASIC2.46□□□□□ -2.02
CDT1Q9H211 AC080013.2-201ENST00000460866 323 ntBASIC2.46□□□□□ -2.02
CDT1Q9H211 RNU6-1012P-201ENST00000516606 109 ntBASIC2.46□□□□□ -2.02
CDT1Q9H211 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.46□□□□□ -2.02
CDT1Q9H211 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.46□□□□□ -2.02
CDT1Q9H211 AC004486.1-201ENST00000546846 233 ntBASIC2.46□□□□□ -2.02
CDT1Q9H211 AC010900.2-201ENST00000604508 210 ntBASIC2.46□□□□□ -2.02
CDT1Q9H211 RMST_6.1-201ENST00000611980 203 ntBASIC2.46□□□□□ -2.02
CDT1Q9H211 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.46□□□□□ -2.02
CDT1Q9H211 AC240442.1-201ENST00000616055 283 ntBASIC2.46□□□□□ -2.02
CDT1Q9H211 AC130454.1-201ENST00000622948 401 ntBASIC2.46□□□□□ -2.02
CDT1Q9H211 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CDT1Q9H211 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CDT1Q9H211 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
CDT1Q9H211 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CDT1Q9H211 RNU6-1159P-201ENST00000362933 107 ntBASIC2.45□□□□□ -2.02
CDT1Q9H211 RNA5SP393-201ENST00000363423 117 ntBASIC2.45□□□□□ -2.02
CDT1Q9H211 RNU1-91P-201ENST00000364746 163 ntBASIC2.45□□□□□ -2.02
CDT1Q9H211 Y_RNA.477-201ENST00000384352 108 ntBASIC2.45□□□□□ -2.02
CDT1Q9H211 MIR10B-201ENST00000385011 110 ntBASIC2.45□□□□□ -2.02
CDT1Q9H211 MIR221-201ENST00000385135 110 ntBASIC2.45□□□□□ -2.02
CDT1Q9H211 RNU6-1093P-201ENST00000391194 107 ntBASIC2.45□□□□□ -2.02
CDT1Q9H211 RNA5SP425-201ENST00000410336 112 ntBASIC2.45□□□□□ -2.02
CDT1Q9H211 AL135786.1-201ENST00000415892 214 ntBASIC2.45□□□□□ -2.02
CDT1Q9H211 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.45□□□□□ -2.02
CDT1Q9H211 RNU6-1143P-201ENST00000516125 104 ntBASIC2.45□□□□□ -2.02
CDT1Q9H211 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.45□□□□□ -2.02
CDT1Q9H211 RNU6-826P-201ENST00000516827 104 ntBASIC2.45□□□□□ -2.02
CDT1Q9H211 SNORA40.15-201ENST00000516884 107 ntBASIC2.45□□□□□ -2.02
CDT1Q9H211 RNU6-58P-201ENST00000517143 103 ntBASIC2.45□□□□□ -2.02
CDT1Q9H211 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.45□□□□□ -2.02
CDT1Q9H211 MIR1273D-201ENST00000577266 86 ntBASIC2.45□□□□□ -2.02
CDT1Q9H211 MIR4659A-201ENST00000580269 81 ntBASIC2.45□□□□□ -2.02
CDT1Q9H211 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.45□□□□□ -2.02
CDT1Q9H211 MIR3128-201ENST00000581957 66 ntBASIC2.45□□□□□ -2.02
CDT1Q9H211 PCGEM1.1-201ENST00000613431 131 ntBASIC2.45□□□□□ -2.02
CDT1Q9H211 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.45□□□□□ -2.02
CDT1Q9H211 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.45□□□□□ -2.02
CDT1Q9H211 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.45□□□□□ -2.02
CDT1Q9H211 AC137590.2-201ENST00000619709 240 ntBASIC2.45□□□□□ -2.02
CDT1Q9H211 AC078938.1-201ENST00000620993 318 ntBASIC2.45□□□□□ -2.02
CDT1Q9H211 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.45□□□□□ -2.02
CDT1Q9H211 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CDT1Q9H211 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.45□□□□□ -2.02
CDT1Q9H211 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CDT1Q9H211 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CDT1Q9H211 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.44□□□□□ -2.02
CDT1Q9H211 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
CDT1Q9H211 Y_RNA.16-201ENST00000362421 102 ntBASIC2.44□□□□□ -2.02
CDT1Q9H211 Y_RNA.84-201ENST00000363011 104 ntBASIC2.44□□□□□ -2.02
CDT1Q9H211 U8.2-201ENST00000363156 134 ntBASIC2.44□□□□□ -2.02
CDT1Q9H211 RNU6-281P-201ENST00000384212 103 ntBASIC2.44□□□□□ -2.02
CDT1Q9H211 RNY3P4-201ENST00000384428 101 ntBASIC2.44□□□□□ -2.02
CDT1Q9H211 RNU6-1274P-201ENST00000384557 107 ntBASIC2.44□□□□□ -2.02
CDT1Q9H211 Y_RNA.556-201ENST00000384677 113 ntBASIC2.44□□□□□ -2.02
CDT1Q9H211 MIR153-2-201ENST00000385225 87 ntBASIC2.44□□□□□ -2.02
CDT1Q9H211 SNORD115-46-201ENST00000390982 71 ntBASIC2.44□□□□□ -2.02
CDT1Q9H211 SNORA12-201ENST00000391162 147 ntBASIC2.44□□□□□ -2.02
CDT1Q9H211 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.44□□□□□ -2.02
CDT1Q9H211 MIR1302-6-201ENST00000408466 90 ntBASIC2.44□□□□□ -2.02
CDT1Q9H211 AC003685.2-201ENST00000422795 395 ntBASIC2.44□□□□□ -2.02
CDT1Q9H211 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.44□□□□□ -2.02
CDT1Q9H211 AC025465.3-201ENST00000510570 311 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms