Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 RNU6-1240P-201ENST00000365155 104 ntBASIC0.66□□□□□ -2.3
ALX4Q9H161 RNU6-996P-201ENST00000365438 107 ntBASIC0.66□□□□□ -2.3
ALX4Q9H161 SNORA67.2-201ENST00000384300 149 ntBASIC0.66□□□□□ -2.3
ALX4Q9H161 AC016909.1-201ENST00000415916 166 ntBASIC0.66□□□□□ -2.3
ALX4Q9H161 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.66□□□□□ -2.3
ALX4Q9H161 TIMM9P3-201ENST00000428659 274 ntBASIC0.66□□□□□ -2.3
ALX4Q9H161 MTND4LP16-201ENST00000440828 295 ntBASIC0.66□□□□□ -2.3
ALX4Q9H161 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.66□□□□□ -2.3
ALX4Q9H161 AC073415.1-201ENST00000449240 153 ntBASIC0.66□□□□□ -2.3
ALX4Q9H161 SRRM1P2-201ENST00000464531 1192 ntBASIC0.66□□□□□ -2.3
ALX4Q9H161 AC092991.1-201ENST00000477176 376 ntBASIC0.66□□□□□ -2.3
ALX4Q9H161 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.66□□□□□ -2.3
ALX4Q9H161 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.66□□□□□ -2.3
ALX4Q9H161 AC025647.1-201ENST00000517879 253 ntBASIC0.66□□□□□ -2.3
ALX4Q9H161 AC087854.1-201ENST00000519706 414 ntBASIC0.66□□□□□ -2.3
ALX4Q9H161 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.66□□□□□ -2.3
ALX4Q9H161 AL390123.1-201ENST00000603216 237 ntBASIC0.66□□□□□ -2.3
ALX4Q9H161 AC022217.4-201ENST00000604389 163 ntBASIC0.66□□□□□ -2.3
ALX4Q9H161 AC064836.2-201ENST00000609491 462 ntBASIC0.66□□□□□ -2.3
ALX4Q9H161 MIR6857-201ENST00000613267 93 ntBASIC0.66□□□□□ -2.3
ALX4Q9H161 PVT1_3.1-201ENST00000620853 95 ntBASIC0.66□□□□□ -2.3
ALX4Q9H161 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.66□□□□□ -2.3
ALX4Q9H161 AC139792.3-201ENST00000623525 224 ntBASIC0.66□□□□□ -2.3
ALX4Q9H161 AL078596.1-201ENST00000624856 447 ntBASIC0.66□□□□□ -2.3
ALX4Q9H161 AC008873.1-201ENST00000625051 138 ntBASIC0.66□□□□□ -2.3
ALX4Q9H161 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.65□□□□□ -2.3
ALX4Q9H161 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
ALX4Q9H161 AC018630.2-201ENST00000534866 2403 ntBASIC0.65□□□□□ -2.31
ALX4Q9H161 Y_RNA.159-201ENST00000363674 87 ntBASIC0.65□□□□□ -2.31
ALX4Q9H161 RNU6-342P-201ENST00000384521 104 ntBASIC0.65□□□□□ -2.31
ALX4Q9H161 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.65□□□□□ -2.31
ALX4Q9H161 AL358934.1-201ENST00000432346 324 ntBASIC0.65□□□□□ -2.31
ALX4Q9H161 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.65□□□□□ -2.31
ALX4Q9H161 MTND1P27-201ENST00000451117 902 ntBASIC0.65□□□□□ -2.31
ALX4Q9H161 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.65□□□□□ -2.31
ALX4Q9H161 RNU6-221P-201ENST00000459541 99 ntBASIC0.65□□□□□ -2.31
ALX4Q9H161 CCDC34P1-201ENST00000507441 517 ntBASIC0.65□□□□□ -2.31
ALX4Q9H161 SNORA31.2-201ENST00000516019 134 ntBASIC0.65□□□□□ -2.31
ALX4Q9H161 RN7SKP287-201ENST00000516546 266 ntBASIC0.65□□□□□ -2.31
ALX4Q9H161 RNU6-344P-201ENST00000516635 111 ntBASIC0.65□□□□□ -2.31
ALX4Q9H161 DEFB108E-201ENST00000524692 240 ntBASIC0.65□□□□□ -2.31
ALX4Q9H161 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
ALX4Q9H161 MRPS36P4-201ENST00000534436 298 ntBASIC0.65□□□□□ -2.31
ALX4Q9H161 SCOCP1-201ENST00000554676 349 ntBASIC0.65□□□□□ -2.31
ALX4Q9H161 MIR3908-201ENST00000579798 126 ntBASIC0.65□□□□□ -2.31
ALX4Q9H161 AC004223.2-201ENST00000590309 544 ntBASIC0.65□□□□□ -2.31
ALX4Q9H161 AC093424.1-201ENST00000604999 338 ntBASIC0.65□□□□□ -2.31
ALX4Q9H161 AC137590.2-201ENST00000619709 240 ntBASIC0.65□□□□□ -2.31
ALX4Q9H161 MIR8054-201ENST00000620877 86 ntBASIC0.65□□□□□ -2.31
ALX4Q9H161 SCARNA4-201ENST00000629045 128 ntBASIC0.65□□□□□ -2.31
ALX4Q9H161 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
ALX4Q9H161 AC068700.1-201ENST00000565862 3754 ntBASIC0.64□□□□□ -2.31
ALX4Q9H161 RNU4-79P-201ENST00000362764 141 ntBASIC0.64□□□□□ -2.31
ALX4Q9H161 SNORD114-26-201ENST00000363543 72 ntBASIC0.64□□□□□ -2.31
ALX4Q9H161 RNU6-1317P-201ENST00000364582 104 ntBASIC0.64□□□□□ -2.31
ALX4Q9H161 RNU6-910P-201ENST00000390844 107 ntBASIC0.64□□□□□ -2.31
ALX4Q9H161 SNORD12-201ENST00000391002 90 ntBASIC0.64□□□□□ -2.31
ALX4Q9H161 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
ALX4Q9H161 AL606923.1-201ENST00000406616 190 ntBASIC0.64□□□□□ -2.31
ALX4Q9H161 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.64□□□□□ -2.31
ALX4Q9H161 RNU6-1054P-201ENST00000411293 104 ntBASIC0.64□□□□□ -2.31
ALX4Q9H161 MTCO2P18-201ENST00000457151 658 ntBASIC0.64□□□□□ -2.31
ALX4Q9H161 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.64□□□□□ -2.31
ALX4Q9H161 AF186996.7-201ENST00000492781 209 ntBASIC0.64□□□□□ -2.31
ALX4Q9H161 RNU6-189P-201ENST00000516120 101 ntBASIC0.64□□□□□ -2.31
ALX4Q9H161 RNU6-430P-201ENST00000517078 107 ntBASIC0.64□□□□□ -2.31
ALX4Q9H161 MTCO2P4-201ENST00000517968 247 ntBASIC0.64□□□□□ -2.31
ALX4Q9H161 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.64□□□□□ -2.31
ALX4Q9H161 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.64□□□□□ -2.31
ALX4Q9H161 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.64□□□□□ -2.31
ALX4Q9H161 AC004584.2-201ENST00000570407 410 ntBASIC0.64□□□□□ -2.31
ALX4Q9H161 MIR5695-201ENST00000579717 85 ntBASIC0.64□□□□□ -2.31
ALX4Q9H161 AC008088.1-201ENST00000580993 280 ntBASIC0.64□□□□□ -2.31
ALX4Q9H161 MIR4424-201ENST00000585257 86 ntBASIC0.64□□□□□ -2.31
ALX4Q9H161 Z94722.1-201ENST00000604328 474 ntBASIC0.64□□□□□ -2.31
ALX4Q9H161 RMST_3.1-201ENST00000611651 109 ntBASIC0.64□□□□□ -2.31
ALX4Q9H161 AL603755.1-201ENST00000619504 163 ntBASIC0.64□□□□□ -2.31
ALX4Q9H161 AL513423.1-201ENST00000621695 132 ntBASIC0.64□□□□□ -2.31
ALX4Q9H161 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
ALX4Q9H161 RNU6-1329P-201ENST00000365664 107 ntBASIC0.63□□□□□ -2.31
ALX4Q9H161 RNU5A-6P-201ENST00000384136 116 ntBASIC0.63□□□□□ -2.31
ALX4Q9H161 RNU6-440P-201ENST00000390882 105 ntBASIC0.63□□□□□ -2.31
ALX4Q9H161 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.63□□□□□ -2.31
ALX4Q9H161 MRPL42P3-201ENST00000401492 326 ntBASIC0.63□□□□□ -2.31
ALX4Q9H161 AL034345.1-201ENST00000407768 123 ntBASIC0.63□□□□□ -2.31
ALX4Q9H161 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.63□□□□□ -2.31
ALX4Q9H161 RNU6-733P-201ENST00000410759 104 ntBASIC0.63□□□□□ -2.31
ALX4Q9H161 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.63□□□□□ -2.31
ALX4Q9H161 AC063976.4-201ENST00000421971 163 ntBASIC0.63□□□□□ -2.31
ALX4Q9H161 AC245047.3-201ENST00000429428 127 ntBASIC0.63□□□□□ -2.31
ALX4Q9H161 RNU6-415P-201ENST00000516252 97 ntBASIC0.63□□□□□ -2.31
ALX4Q9H161 RN7SKP49-201ENST00000516675 260 ntBASIC0.63□□□□□ -2.31
ALX4Q9H161 AC136628.3-201ENST00000521868 290 ntBASIC0.63□□□□□ -2.31
ALX4Q9H161 AC104576.1-201ENST00000524225 88 ntBASIC0.63□□□□□ -2.31
ALX4Q9H161 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
ALX4Q9H161 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.63□□□□□ -2.31
ALX4Q9H161 CYP3A137P-201ENST00000562436 69 ntBASIC0.63□□□□□ -2.31
ALX4Q9H161 MIR5000-201ENST00000577717 103 ntBASIC0.63□□□□□ -2.31
ALX4Q9H161 AC087683.1-201ENST00000591187 441 ntBASIC0.63□□□□□ -2.31
ALX4Q9H161 GHRLOS.1-201ENST00000610995 70 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms