Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 RNU6-63P-201ENST00000516690 95 ntBASIC3.92□□□□□ -1.78
COL25A1Q9BXS0 RNU7-149P-201ENST00000516739 59 ntBASIC3.92□□□□□ -1.78
COL25A1Q9BXS0 AC022695.1-201ENST00000522089 237 ntBASIC3.92□□□□□ -1.78
COL25A1Q9BXS0 AC021739.1-201ENST00000559631 174 ntBASIC3.92□□□□□ -1.78
COL25A1Q9BXS0 AC105137.2-201ENST00000569073 466 ntBASIC3.92□□□□□ -1.78
COL25A1Q9BXS0 MIR4662B-201ENST00000579498 81 ntBASIC3.92□□□□□ -1.78
COL25A1Q9BXS0 MIR2681-201ENST00000581814 105 ntBASIC3.92□□□□□ -1.78
COL25A1Q9BXS0 RNA5SP108-201ENST00000605921 117 ntBASIC3.92□□□□□ -1.78
COL25A1Q9BXS0 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.92□□□□□ -1.78
COL25A1Q9BXS0 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
COL25A1Q9BXS0 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL25A1Q9BXS0 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
COL25A1Q9BXS0 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL25A1Q9BXS0 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.92□□□□□ -1.78
COL25A1Q9BXS0 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL25A1Q9BXS0 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL25A1Q9BXS0 Y_RNA.40-201ENST00000362645 93 ntBASIC3.91□□□□□ -1.78
COL25A1Q9BXS0 Y_RNA.213-201ENST00000364178 111 ntBASIC3.91□□□□□ -1.78
COL25A1Q9BXS0 RNU6-1305P-201ENST00000364353 104 ntBASIC3.91□□□□□ -1.78
COL25A1Q9BXS0 MIR562-201ENST00000384894 95 ntBASIC3.91□□□□□ -1.78
COL25A1Q9BXS0 AL356535.1-201ENST00000440335 398 ntBASIC3.91□□□□□ -1.78
COL25A1Q9BXS0 MIR4666B-201ENST00000578142 81 ntBASIC3.91□□□□□ -1.78
COL25A1Q9BXS0 MIR5004-201ENST00000579078 107 ntBASIC3.91□□□□□ -1.78
COL25A1Q9BXS0 AC007229.1-201ENST00000590455 412 ntBASIC3.91□□□□□ -1.78
COL25A1Q9BXS0 SNRPGP15-201ENST00000600149 222 ntBASIC3.91□□□□□ -1.78
COL25A1Q9BXS0 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.91□□□□□ -1.78
COL25A1Q9BXS0 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.91□□□□□ -1.78
COL25A1Q9BXS0 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.91□□□□□ -1.78
COL25A1Q9BXS0 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL25A1Q9BXS0 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL25A1Q9BXS0 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
COL25A1Q9BXS0 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
COL25A1Q9BXS0 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
COL25A1Q9BXS0 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
COL25A1Q9BXS0 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC3.9□□□□□ -1.78
COL25A1Q9BXS0 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.9□□□□□ -1.78
COL25A1Q9BXS0 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
COL25A1Q9BXS0 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
COL25A1Q9BXS0 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
COL25A1Q9BXS0 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
COL25A1Q9BXS0 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.78
COL25A1Q9BXS0 SNORD9-201ENST00000362566 104 ntBASIC3.9□□□□□ -1.79
COL25A1Q9BXS0 RNU6-529P-201ENST00000363383 104 ntBASIC3.9□□□□□ -1.79
COL25A1Q9BXS0 Y_RNA.203-201ENST00000364106 102 ntBASIC3.9□□□□□ -1.79
COL25A1Q9BXS0 Y_RNA.344-201ENST00000365381 112 ntBASIC3.9□□□□□ -1.79
COL25A1Q9BXS0 RNU6-24P-201ENST00000384440 107 ntBASIC3.9□□□□□ -1.79
COL25A1Q9BXS0 SNORA44-201ENST00000384584 132 ntBASIC3.9□□□□□ -1.79
COL25A1Q9BXS0 MT-TI-201ENST00000387365 69 ntBASIC3.9□□□□□ -1.79
COL25A1Q9BXS0 MIR1911-201ENST00000410783 80 ntBASIC3.9□□□□□ -1.79
COL25A1Q9BXS0 AC018634.1-201ENST00000437554 401 ntBASIC3.9□□□□□ -1.79
COL25A1Q9BXS0 RPL35AP21-201ENST00000437667 333 ntBASIC3.9□□□□□ -1.79
COL25A1Q9BXS0 RPS29P20-201ENST00000489592 171 ntBASIC3.9□□□□□ -1.79
COL25A1Q9BXS0 AC093663.1-201ENST00000497190 394 ntBASIC3.9□□□□□ -1.79
COL25A1Q9BXS0 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.9□□□□□ -1.79
COL25A1Q9BXS0 SCARNA23-201ENST00000516060 130 ntBASIC3.9□□□□□ -1.79
COL25A1Q9BXS0 RNU6-1149P-201ENST00000516810 97 ntBASIC3.9□□□□□ -1.79
COL25A1Q9BXS0 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.9□□□□□ -1.79
COL25A1Q9BXS0 AC091544.4-201ENST00000555268 342 ntBASIC3.9□□□□□ -1.79
COL25A1Q9BXS0 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.9□□□□□ -1.79
COL25A1Q9BXS0 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
COL25A1Q9BXS0 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
COL25A1Q9BXS0 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
COL25A1Q9BXS0 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
COL25A1Q9BXS0 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
COL25A1Q9BXS0 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.89□□□□□ -1.79
COL25A1Q9BXS0 RNU4-82P-201ENST00000362443 140 ntBASIC3.89□□□□□ -1.79
COL25A1Q9BXS0 Y_RNA.265-201ENST00000364677 108 ntBASIC3.89□□□□□ -1.79
COL25A1Q9BXS0 Y_RNA.313-201ENST00000365095 103 ntBASIC3.89□□□□□ -1.79
COL25A1Q9BXS0 SNORA4.2-201ENST00000365313 147 ntBASIC3.89□□□□□ -1.79
COL25A1Q9BXS0 RNU6-979P-201ENST00000383896 107 ntBASIC3.89□□□□□ -1.79
COL25A1Q9BXS0 RNU6-675P-201ENST00000384236 104 ntBASIC3.89□□□□□ -1.79
COL25A1Q9BXS0 RNA5SP511-201ENST00000410487 115 ntBASIC3.89□□□□□ -1.79
COL25A1Q9BXS0 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.89□□□□□ -1.79
COL25A1Q9BXS0 EIF4EP4-201ENST00000424916 578 ntBASIC3.89□□□□□ -1.79
COL25A1Q9BXS0 AL353705.1-201ENST00000433468 480 ntBASIC3.89□□□□□ -1.79
COL25A1Q9BXS0 AC245102.2-201ENST00000448956 180 ntBASIC3.89□□□□□ -1.79
COL25A1Q9BXS0 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.89□□□□□ -1.79
COL25A1Q9BXS0 RNA5SP57-201ENST00000459463 123 ntBASIC3.89□□□□□ -1.79
COL25A1Q9BXS0 AC145146.1-201ENST00000496370 254 ntBASIC3.89□□□□□ -1.79
COL25A1Q9BXS0 OR9P1P-201ENST00000496431 281 ntBASIC3.89□□□□□ -1.79
COL25A1Q9BXS0 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.89□□□□□ -1.79
COL25A1Q9BXS0 SCARNA15-202ENST00000516881 127 ntBASIC3.89□□□□□ -1.79
COL25A1Q9BXS0 AC022254.1-201ENST00000567857 235 ntBASIC3.89□□□□□ -1.79
COL25A1Q9BXS0 AC007656.2-201ENST00000624902 4547 ntBASIC3.89□□□□□ -1.79
COL25A1Q9BXS0 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
COL25A1Q9BXS0 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.89□□□□□ -1.79
COL25A1Q9BXS0 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
COL25A1Q9BXS0 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
COL25A1Q9BXS0 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
COL25A1Q9BXS0 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
COL25A1Q9BXS0 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.88□□□□□ -1.79
COL25A1Q9BXS0 AL353746.1-201ENST00000566293 6881 ntBASIC3.88□□□□□ -1.79
COL25A1Q9BXS0 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
COL25A1Q9BXS0 Y_RNA.796-201ENST00000364268 102 ntBASIC3.88□□□□□ -1.79
COL25A1Q9BXS0 Y_RNA.799-201ENST00000364992 102 ntBASIC3.88□□□□□ -1.79
COL25A1Q9BXS0 RNA5SP151-201ENST00000365632 117 ntBASIC3.88□□□□□ -1.79
COL25A1Q9BXS0 RPL21P3-201ENST00000395517 478 ntBASIC3.88□□□□□ -1.79
COL25A1Q9BXS0 AC245291.1-201ENST00000419501 328 ntBASIC3.88□□□□□ -1.79
COL25A1Q9BXS0 SNORA71B-202ENST00000439232 272 ntBASIC3.88□□□□□ -1.79
COL25A1Q9BXS0 snoU13.14-201ENST00000459372 104 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 186.4 ms