Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
USB1Q9BQ65 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
USB1Q9BQ65 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
USB1Q9BQ65 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.98□□□□□ -1.77
USB1Q9BQ65 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
USB1Q9BQ65 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
USB1Q9BQ65 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.97□□□□□ -1.77
USB1Q9BQ65 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.97□□□□□ -1.77
USB1Q9BQ65 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.97□□□□□ -1.77
USB1Q9BQ65 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
USB1Q9BQ65 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
USB1Q9BQ65 MIR494-201ENST00000349529 81 ntBASIC3.97□□□□□ -1.77
USB1Q9BQ65 MIR302B-201ENST00000362188 73 ntBASIC3.97□□□□□ -1.77
USB1Q9BQ65 Y_RNA.344-201ENST00000365381 112 ntBASIC3.97□□□□□ -1.77
USB1Q9BQ65 SNORA2.2-201ENST00000365473 135 ntBASIC3.97□□□□□ -1.77
USB1Q9BQ65 RPS15AP28-201ENST00000435088 386 ntBASIC3.97□□□□□ -1.77
USB1Q9BQ65 HMGN2P34-201ENST00000437647 269 ntBASIC3.97□□□□□ -1.77
USB1Q9BQ65 RPL23AP52-201ENST00000439311 478 ntBASIC3.97□□□□□ -1.77
USB1Q9BQ65 AC107297.1-201ENST00000459991 176 ntBASIC3.97□□□□□ -1.77
USB1Q9BQ65 RN7SL385P-201ENST00000468873 276 ntBASIC3.97□□□□□ -1.77
USB1Q9BQ65 RN7SL812P-201ENST00000493791 279 ntBASIC3.97□□□□□ -1.77
USB1Q9BQ65 IGLV3-26-201ENST00000520756 302 ntBASIC3.97□□□□□ -1.77
USB1Q9BQ65 MIR4277-201ENST00000578298 84 ntBASIC3.97□□□□□ -1.77
USB1Q9BQ65 AC087685.1-201ENST00000587507 141 ntBASIC3.97□□□□□ -1.77
USB1Q9BQ65 AC021443.1-201ENST00000604478 211 ntBASIC3.97□□□□□ -1.77
USB1Q9BQ65 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.97□□□□□ -1.77
USB1Q9BQ65 AC134878.1-201ENST00000619901 243 ntBASIC3.97□□□□□ -1.77
USB1Q9BQ65 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.97□□□□□ -1.77
USB1Q9BQ65 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.97□□□□□ -1.77
USB1Q9BQ65 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.97□□□□□ -1.77
USB1Q9BQ65 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.97□□□□□ -1.77
USB1Q9BQ65 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
USB1Q9BQ65 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.97□□□□□ -1.77
USB1Q9BQ65 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
USB1Q9BQ65 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
USB1Q9BQ65 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
USB1Q9BQ65 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.96□□□□□ -1.78
USB1Q9BQ65 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
USB1Q9BQ65 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
USB1Q9BQ65 CPHL1P-201ENST00000461341 3407 ntBASIC3.96□□□□□ -1.78
USB1Q9BQ65 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
USB1Q9BQ65 Y_RNA.93-201ENST00000363066 109 ntBASIC3.96□□□□□ -1.78
USB1Q9BQ65 Y_RNA.265-201ENST00000364677 108 ntBASIC3.96□□□□□ -1.78
USB1Q9BQ65 RNU6-1134P-201ENST00000365156 101 ntBASIC3.96□□□□□ -1.78
USB1Q9BQ65 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
USB1Q9BQ65 SNORD78.1-201ENST00000390866 65 ntBASIC3.96□□□□□ -1.78
USB1Q9BQ65 RNU11-5P-201ENST00000391216 129 ntBASIC3.96□□□□□ -1.78
USB1Q9BQ65 RPS12P10-201ENST00000427031 377 ntBASIC3.96□□□□□ -1.78
USB1Q9BQ65 AC012671.1-201ENST00000451912 203 ntBASIC3.96□□□□□ -1.78
USB1Q9BQ65 RPS26P15-201ENST00000488067 348 ntBASIC3.96□□□□□ -1.78
USB1Q9BQ65 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.96□□□□□ -1.78
USB1Q9BQ65 SNORA31.1-201ENST00000515993 133 ntBASIC3.96□□□□□ -1.78
USB1Q9BQ65 SNORA31.5-201ENST00000516190 133 ntBASIC3.96□□□□□ -1.78
USB1Q9BQ65 Y_RNA.714-201ENST00000517065 90 ntBASIC3.96□□□□□ -1.78
USB1Q9BQ65 AC026421.1-201ENST00000519101 163 ntBASIC3.96□□□□□ -1.78
USB1Q9BQ65 SUMO2P16-201ENST00000519475 264 ntBASIC3.96□□□□□ -1.78
USB1Q9BQ65 AC004486.1-201ENST00000546846 233 ntBASIC3.96□□□□□ -1.78
USB1Q9BQ65 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
USB1Q9BQ65 AL160290.3-201ENST00000604869 165 ntBASIC3.96□□□□□ -1.78
USB1Q9BQ65 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
USB1Q9BQ65 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
USB1Q9BQ65 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
USB1Q9BQ65 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
USB1Q9BQ65 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
USB1Q9BQ65 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
USB1Q9BQ65 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
USB1Q9BQ65 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
USB1Q9BQ65 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
USB1Q9BQ65 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.95□□□□□ -1.78
USB1Q9BQ65 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
USB1Q9BQ65 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.95□□□□□ -1.78
USB1Q9BQ65 ZNF271P-202ENST00000465539 1970 ntBASIC3.95□□□□□ -1.78
USB1Q9BQ65 RNU6-349P-201ENST00000362402 107 ntBASIC3.95□□□□□ -1.78
USB1Q9BQ65 Y_RNA.219-201ENST00000364232 113 ntBASIC3.95□□□□□ -1.78
USB1Q9BQ65 SNORA63D-201ENST00000364359 132 ntBASIC3.95□□□□□ -1.78
USB1Q9BQ65 Y_RNA.298-201ENST00000364960 107 ntBASIC3.95□□□□□ -1.78
USB1Q9BQ65 Y_RNA.410-201ENST00000383992 113 ntBASIC3.95□□□□□ -1.78
USB1Q9BQ65 AL139247.1-201ENST00000422768 325 ntBASIC3.95□□□□□ -1.78
USB1Q9BQ65 SNORA71B-202ENST00000439232 272 ntBASIC3.95□□□□□ -1.78
USB1Q9BQ65 RPL23AP93-201ENST00000440847 484 ntBASIC3.95□□□□□ -1.78
USB1Q9BQ65 PGBD4P5-201ENST00000445958 426 ntBASIC3.95□□□□□ -1.78
USB1Q9BQ65 RN7SL303P-201ENST00000469773 251 ntBASIC3.95□□□□□ -1.78
USB1Q9BQ65 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.95□□□□□ -1.78
USB1Q9BQ65 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.95□□□□□ -1.78
USB1Q9BQ65 RNU7-99P-201ENST00000516271 62 ntBASIC3.95□□□□□ -1.78
USB1Q9BQ65 RN7SKP209-201ENST00000516888 304 ntBASIC3.95□□□□□ -1.78
USB1Q9BQ65 RNU6-856P-201ENST00000516959 98 ntBASIC3.95□□□□□ -1.78
USB1Q9BQ65 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.95□□□□□ -1.78
USB1Q9BQ65 AC091178.1-203ENST00000584586 279 ntBASIC3.95□□□□□ -1.78
USB1Q9BQ65 AL590808.1-201ENST00000618696 141 ntBASIC3.95□□□□□ -1.78
USB1Q9BQ65 AC015726.2-201ENST00000620112 122 ntBASIC3.95□□□□□ -1.78
USB1Q9BQ65 AC018630.2-201ENST00000534866 2403 ntBASIC3.95□□□□□ -1.78
USB1Q9BQ65 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
USB1Q9BQ65 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
USB1Q9BQ65 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
USB1Q9BQ65 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.94□□□□□ -1.78
USB1Q9BQ65 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
USB1Q9BQ65 MIR126-201ENST00000362291 85 ntBASIC3.94□□□□□ -1.78
USB1Q9BQ65 SNORA70.2-201ENST00000364506 135 ntBASIC3.94□□□□□ -1.78
USB1Q9BQ65 Y_RNA.342-201ENST00000365352 113 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms