Protein–RNA interactions for Protein: Q96SB8

SMC6, Structural maintenance of chromosomes protein 6, humanhuman

Predictions only

Length 1,091 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6Q96SB8 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.12□□□□□ -2.07
SMC6Q96SB8 AC007395.1-201ENST00000451333 677 ntBASIC2.12□□□□□ -2.07
SMC6Q96SB8 RPS23P5-201ENST00000495419 428 ntBASIC2.12□□□□□ -2.07
SMC6Q96SB8 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.12□□□□□ -2.07
SMC6Q96SB8 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.12□□□□□ -2.07
SMC6Q96SB8 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.12□□□□□ -2.07
SMC6Q96SB8 AC125232.2-201ENST00000592457 143 ntBASIC2.12□□□□□ -2.07
SMC6Q96SB8 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.12□□□□□ -2.07
SMC6Q96SB8 MIR1244-1-201ENST00000612829 85 ntBASIC2.12□□□□□ -2.07
SMC6Q96SB8 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.12□□□□□ -2.07
SMC6Q96SB8 MIR1244-3-201ENST00000635744 85 ntBASIC2.12□□□□□ -2.07
SMC6Q96SB8 MIR1244-2-201ENST00000636449 85 ntBASIC2.12□□□□□ -2.07
SMC6Q96SB8 MIR1244-4-202ENST00000636813 85 ntBASIC2.12□□□□□ -2.07
SMC6Q96SB8 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SMC6Q96SB8 RNU6-222P-201ENST00000362438 107 ntBASIC2.11□□□□□ -2.07
SMC6Q96SB8 RNU4-42P-201ENST00000364738 142 ntBASIC2.11□□□□□ -2.07
SMC6Q96SB8 RNU6-541P-201ENST00000384709 110 ntBASIC2.11□□□□□ -2.07
SMC6Q96SB8 RNA5SP504-201ENST00000410676 117 ntBASIC2.11□□□□□ -2.07
SMC6Q96SB8 AC092423.1-201ENST00000430165 186 ntBASIC2.11□□□□□ -2.07
SMC6Q96SB8 MTCYBP6-201ENST00000441810 138 ntBASIC2.11□□□□□ -2.07
SMC6Q96SB8 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.11□□□□□ -2.07
SMC6Q96SB8 AC055731.1-201ENST00000474387 401 ntBASIC2.11□□□□□ -2.07
SMC6Q96SB8 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.11□□□□□ -2.07
SMC6Q96SB8 AC105758.1-201ENST00000506038 399 ntBASIC2.11□□□□□ -2.07
SMC6Q96SB8 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.11□□□□□ -2.07
SMC6Q96SB8 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.11□□□□□ -2.07
SMC6Q96SB8 SCARNA16.3-201ENST00000516595 184 ntBASIC2.11□□□□□ -2.07
SMC6Q96SB8 SNRPGP18-201ENST00000553000 214 ntBASIC2.11□□□□□ -2.07
SMC6Q96SB8 UBL5P4-201ENST00000562584 236 ntBASIC2.11□□□□□ -2.07
SMC6Q96SB8 AC012493.3-201ENST00000604494 112 ntBASIC2.11□□□□□ -2.07
SMC6Q96SB8 MIR6873-201ENST00000622788 63 ntBASIC2.11□□□□□ -2.07
SMC6Q96SB8 AC134503.1-201ENST00000633048 54 ntBASIC2.11□□□□□ -2.07
SMC6Q96SB8 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
SMC6Q96SB8 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SMC6Q96SB8 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SMC6Q96SB8 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SMC6Q96SB8 MIR340-201ENST00000362125 95 ntBASIC2.1□□□□□ -2.07
SMC6Q96SB8 Y_RNA.99-201ENST00000363138 105 ntBASIC2.1□□□□□ -2.07
SMC6Q96SB8 Y_RNA.428-201ENST00000384078 102 ntBASIC2.1□□□□□ -2.07
SMC6Q96SB8 RNU6-1145P-201ENST00000384246 107 ntBASIC2.1□□□□□ -2.07
SMC6Q96SB8 MIR329-1-201ENST00000385028 80 ntBASIC2.1□□□□□ -2.07
SMC6Q96SB8 MIR586-201ENST00000385035 97 ntBASIC2.1□□□□□ -2.07
SMC6Q96SB8 SNORA69.1-201ENST00000390904 137 ntBASIC2.1□□□□□ -2.07
SMC6Q96SB8 MIR300-201ENST00000401138 83 ntBASIC2.1□□□□□ -2.07
SMC6Q96SB8 AL354751.2-201ENST00000415471 210 ntBASIC2.1□□□□□ -2.07
SMC6Q96SB8 DPH3P2-201ENST00000422618 250 ntBASIC2.1□□□□□ -2.07
SMC6Q96SB8 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SMC6Q96SB8 UBE2V1P7-201ENST00000446395 340 ntBASIC2.1□□□□□ -2.07
SMC6Q96SB8 CHEK2P4-201ENST00000450340 246 ntBASIC2.1□□□□□ -2.07
SMC6Q96SB8 NDUFB4P10-201ENST00000452541 359 ntBASIC2.1□□□□□ -2.07
SMC6Q96SB8 U8.22-201ENST00000459141 133 ntBASIC2.1□□□□□ -2.07
SMC6Q96SB8 RPS29P21-201ENST00000496272 170 ntBASIC2.1□□□□□ -2.07
SMC6Q96SB8 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.1□□□□□ -2.07
SMC6Q96SB8 SNORD116.3-201ENST00000517176 78 ntBASIC2.1□□□□□ -2.07
SMC6Q96SB8 AC144568.1-201ENST00000520139 137 ntBASIC2.1□□□□□ -2.07
SMC6Q96SB8 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.1□□□□□ -2.07
SMC6Q96SB8 MIR1273D-201ENST00000577266 86 ntBASIC2.1□□□□□ -2.07
SMC6Q96SB8 MIR4648-201ENST00000580107 72 ntBASIC2.1□□□□□ -2.07
SMC6Q96SB8 MIR5006-201ENST00000583027 110 ntBASIC2.1□□□□□ -2.07
SMC6Q96SB8 AC078899.2-201ENST00000595282 212 ntBASIC2.1□□□□□ -2.07
SMC6Q96SB8 AL096840.1-201ENST00000603287 93 ntBASIC2.1□□□□□ -2.07
SMC6Q96SB8 AC090971.5-201ENST00000621102 293 ntBASIC2.1□□□□□ -2.07
SMC6Q96SB8 MIR4272-201ENST00000635924 64 ntBASIC2.1□□□□□ -2.07
SMC6Q96SB8 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.1□□□□□ -2.07
SMC6Q96SB8 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SMC6Q96SB8 RNU6-545P-201ENST00000362681 104 ntBASIC2.09□□□□□ -2.07
SMC6Q96SB8 Y_RNA.358-201ENST00000365491 99 ntBASIC2.09□□□□□ -2.07
SMC6Q96SB8 RNU6-474P-201ENST00000384243 107 ntBASIC2.09□□□□□ -2.07
SMC6Q96SB8 HMGN2P39-201ENST00000398005 273 ntBASIC2.09□□□□□ -2.07
SMC6Q96SB8 AC123900.1-201ENST00000420390 96 ntBASIC2.09□□□□□ -2.07
SMC6Q96SB8 AC010095.1-201ENST00000443543 144 ntBASIC2.09□□□□□ -2.07
SMC6Q96SB8 AC007677.1-201ENST00000445757 515 ntBASIC2.09□□□□□ -2.07
SMC6Q96SB8 RNU6-475P-201ENST00000516073 104 ntBASIC2.09□□□□□ -2.07
SMC6Q96SB8 SNORA25.14-201ENST00000516481 132 ntBASIC2.09□□□□□ -2.07
SMC6Q96SB8 SNORA31.25-201ENST00000517242 134 ntBASIC2.09□□□□□ -2.07
SMC6Q96SB8 RNU2-19P-201ENST00000517288 84 ntBASIC2.09□□□□□ -2.07
SMC6Q96SB8 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.09□□□□□ -2.07
SMC6Q96SB8 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.09□□□□□ -2.07
SMC6Q96SB8 AC091932.3-201ENST00000624223 323 ntBASIC2.09□□□□□ -2.07
SMC6Q96SB8 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.08□□□□□ -2.08
SMC6Q96SB8 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.08□□□□□ -2.08
SMC6Q96SB8 MIR369-201ENST00000362155 70 ntBASIC2.08□□□□□ -2.08
SMC6Q96SB8 Y_RNA.128-201ENST00000363391 112 ntBASIC2.08□□□□□ -2.08
SMC6Q96SB8 RNU6-438P-201ENST00000365561 103 ntBASIC2.08□□□□□ -2.08
SMC6Q96SB8 RNU6-793P-201ENST00000384233 104 ntBASIC2.08□□□□□ -2.08
SMC6Q96SB8 RNU6-318P-201ENST00000384283 103 ntBASIC2.08□□□□□ -2.08
SMC6Q96SB8 SNORD14D-201ENST00000384390 87 ntBASIC2.08□□□□□ -2.08
SMC6Q96SB8 PMCHL1-202ENST00000423102 261 ntBASIC2.08□□□□□ -2.08
SMC6Q96SB8 BX510359.4-201ENST00000423750 193 ntBASIC2.08□□□□□ -2.08
SMC6Q96SB8 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.08□□□□□ -2.08
SMC6Q96SB8 MTCO1P44-201ENST00000441935 243 ntBASIC2.08□□□□□ -2.08
SMC6Q96SB8 Y_RNA.631-201ENST00000459607 101 ntBASIC2.08□□□□□ -2.08
SMC6Q96SB8 AC091179.3-201ENST00000474761 144 ntBASIC2.08□□□□□ -2.08
SMC6Q96SB8 HMGN2P9-201ENST00000476875 229 ntBASIC2.08□□□□□ -2.08
SMC6Q96SB8 RN7SKP49-201ENST00000516675 260 ntBASIC2.08□□□□□ -2.08
SMC6Q96SB8 RNU4-77P-201ENST00000516692 156 ntBASIC2.08□□□□□ -2.08
SMC6Q96SB8 Y_RNA.701-201ENST00000516812 110 ntBASIC2.08□□□□□ -2.08
SMC6Q96SB8 CYCSP23-201ENST00000519781 313 ntBASIC2.08□□□□□ -2.08
SMC6Q96SB8 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.08□□□□□ -2.08
SMC6Q96SB8 AC007229.1-201ENST00000590455 412 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms