Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AL133373.1-201ENST00000497098 94 ntBASIC1.17□□□□□ -2.22
RPRD1AQ96P16 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.17□□□□□ -2.22
RPRD1AQ96P16 RNU6-344P-201ENST00000516635 111 ntBASIC1.17□□□□□ -2.22
RPRD1AQ96P16 RNU1-117P-201ENST00000517041 158 ntBASIC1.17□□□□□ -2.22
RPRD1AQ96P16 AC016957.1-201ENST00000534895 309 ntBASIC1.17□□□□□ -2.22
RPRD1AQ96P16 AL512310.8-201ENST00000550183 120 ntBASIC1.17□□□□□ -2.22
RPRD1AQ96P16 TPRKBP2-201ENST00000565969 475 ntBASIC1.17□□□□□ -2.22
RPRD1AQ96P16 RNU6-89P-201ENST00000606519 100 ntBASIC1.17□□□□□ -2.22
RPRD1AQ96P16 AC004492.1-201ENST00000607036 742 ntBASIC1.17□□□□□ -2.22
RPRD1AQ96P16 AC097065.2-201ENST00000608159 533 ntBASIC1.17□□□□□ -2.22
RPRD1AQ96P16 AC040896.1-201ENST00000613819 479 ntBASIC1.17□□□□□ -2.22
RPRD1AQ96P16 AL158209.2-201ENST00000619266 216 ntBASIC1.17□□□□□ -2.22
RPRD1AQ96P16 AC137590.2-201ENST00000619709 240 ntBASIC1.17□□□□□ -2.22
RPRD1AQ96P16 snoZ196.1-201ENST00000625269 89 ntBASIC1.17□□□□□ -2.22
RPRD1AQ96P16 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
RPRD1AQ96P16 RNU6-1085P-201ENST00000363576 107 ntBASIC1.16□□□□□ -2.22
RPRD1AQ96P16 MTCO3P40-201ENST00000392516 676 ntBASIC1.16□□□□□ -2.22
RPRD1AQ96P16 AF228730.1-201ENST00000397972 663 ntBASIC1.16□□□□□ -2.22
RPRD1AQ96P16 CALM2P3-201ENST00000400429 449 ntBASIC1.16□□□□□ -2.22
RPRD1AQ96P16 MIR1253-201ENST00000408273 105 ntBASIC1.16□□□□□ -2.22
RPRD1AQ96P16 RNU6-1068P-201ENST00000410958 103 ntBASIC1.16□□□□□ -2.22
RPRD1AQ96P16 AL591704.2-201ENST00000421658 181 ntBASIC1.16□□□□□ -2.22
RPRD1AQ96P16 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.16□□□□□ -2.22
RPRD1AQ96P16 TOMM22P2-201ENST00000430735 237 ntBASIC1.16□□□□□ -2.22
RPRD1AQ96P16 AC079354.2-201ENST00000453523 154 ntBASIC1.16□□□□□ -2.22
RPRD1AQ96P16 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.16□□□□□ -2.22
RPRD1AQ96P16 HMGN1P7-201ENST00000491722 313 ntBASIC1.16□□□□□ -2.22
RPRD1AQ96P16 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.16□□□□□ -2.22
RPRD1AQ96P16 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.16□□□□□ -2.22
RPRD1AQ96P16 AC025647.1-201ENST00000517879 253 ntBASIC1.16□□□□□ -2.22
RPRD1AQ96P16 MTND1P5-201ENST00000517906 940 ntBASIC1.16□□□□□ -2.22
RPRD1AQ96P16 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.16□□□□□ -2.22
RPRD1AQ96P16 AC024995.1-201ENST00000523014 93 ntBASIC1.16□□□□□ -2.22
RPRD1AQ96P16 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.16□□□□□ -2.22
RPRD1AQ96P16 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.16□□□□□ -2.22
RPRD1AQ96P16 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.16□□□□□ -2.22
RPRD1AQ96P16 AC026371.1-201ENST00000551867 419 ntBASIC1.16□□□□□ -2.22
RPRD1AQ96P16 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.16□□□□□ -2.22
RPRD1AQ96P16 AL929325.1-201ENST00000603096 117 ntBASIC1.16□□□□□ -2.22
RPRD1AQ96P16 AC080078.3-201ENST00000605407 463 ntBASIC1.16□□□□□ -2.22
RPRD1AQ96P16 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.16□□□□□ -2.22
RPRD1AQ96P16 U6.108-201ENST00000637764 58 ntBASIC1.16□□□□□ -2.22
RPRD1AQ96P16 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.16□□□□□ -2.22
RPRD1AQ96P16 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
RPRD1AQ96P16 Y_RNA.372-201ENST00000365599 102 ntBASIC1.15□□□□□ -2.23
RPRD1AQ96P16 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
RPRD1AQ96P16 RNA5SP323-201ENST00000391094 133 ntBASIC1.15□□□□□ -2.23
RPRD1AQ96P16 AL356776.1-201ENST00000406574 447 ntBASIC1.15□□□□□ -2.23
RPRD1AQ96P16 MIR320B2-201ENST00000408479 138 ntBASIC1.15□□□□□ -2.23
RPRD1AQ96P16 RNU2-66P-201ENST00000410650 161 ntBASIC1.15□□□□□ -2.23
RPRD1AQ96P16 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.15□□□□□ -2.23
RPRD1AQ96P16 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.15□□□□□ -2.23
RPRD1AQ96P16 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.15□□□□□ -2.23
RPRD1AQ96P16 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.15□□□□□ -2.23
RPRD1AQ96P16 RNU6-221P-201ENST00000459541 99 ntBASIC1.15□□□□□ -2.23
RPRD1AQ96P16 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.15□□□□□ -2.23
RPRD1AQ96P16 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.15□□□□□ -2.23
RPRD1AQ96P16 RNU6-405P-201ENST00000516637 110 ntBASIC1.15□□□□□ -2.23
RPRD1AQ96P16 MIR4295-201ENST00000585286 85 ntBASIC1.15□□□□□ -2.23
RPRD1AQ96P16 AC021506.2-201ENST00000612354 169 ntBASIC1.15□□□□□ -2.23
RPRD1AQ96P16 OR4G1P-203ENST00000641984 1631 ntBASIC1.15□□□□□ -2.23
RPRD1AQ96P16 RNA5SP259-201ENST00000365541 109 ntBASIC1.14□□□□□ -2.23
RPRD1AQ96P16 AC010154.1-201ENST00000425857 269 ntBASIC1.14□□□□□ -2.23
RPRD1AQ96P16 ERLEC1P1-201ENST00000433806 578 ntBASIC1.14□□□□□ -2.23
RPRD1AQ96P16 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.14□□□□□ -2.23
RPRD1AQ96P16 SNORA31.10-201ENST00000516482 106 ntBASIC1.14□□□□□ -2.23
RPRD1AQ96P16 Y_RNA.693-201ENST00000516641 110 ntBASIC1.14□□□□□ -2.23
RPRD1AQ96P16 AC026407.1-201ENST00000518369 204 ntBASIC1.14□□□□□ -2.23
RPRD1AQ96P16 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.14□□□□□ -2.23
RPRD1AQ96P16 MZT1P2-201ENST00000604387 248 ntBASIC1.14□□□□□ -2.23
RPRD1AQ96P16 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.14□□□□□ -2.23
RPRD1AQ96P16 AL359880.1-201ENST00000621879 266 ntBASIC1.14□□□□□ -2.23
RPRD1AQ96P16 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
RPRD1AQ96P16 RNU6-1123P-201ENST00000362347 106 ntBASIC1.13□□□□□ -2.23
RPRD1AQ96P16 RNU6-254P-201ENST00000363377 107 ntBASIC1.13□□□□□ -2.23
RPRD1AQ96P16 RNU6-259P-201ENST00000383999 107 ntBASIC1.13□□□□□ -2.23
RPRD1AQ96P16 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.13□□□□□ -2.23
RPRD1AQ96P16 MTATP6P17-201ENST00000431030 672 ntBASIC1.13□□□□□ -2.23
RPRD1AQ96P16 Z82188.1-201ENST00000436709 154 ntBASIC1.13□□□□□ -2.23
RPRD1AQ96P16 AC005002.2-201ENST00000438228 269 ntBASIC1.13□□□□□ -2.23
RPRD1AQ96P16 COX6CP14-201ENST00000469580 174 ntBASIC1.13□□□□□ -2.23
RPRD1AQ96P16 AC087343.1-201ENST00000477341 475 ntBASIC1.13□□□□□ -2.23
RPRD1AQ96P16 Y_RNA.688-201ENST00000516565 95 ntBASIC1.13□□□□□ -2.23
RPRD1AQ96P16 AC010620.1-201ENST00000601088 1102 ntBASIC1.13□□□□□ -2.23
RPRD1AQ96P16 HSPE1P19-201ENST00000603327 295 ntBASIC1.13□□□□□ -2.23
RPRD1AQ96P16 AC022217.4-201ENST00000604389 163 ntBASIC1.13□□□□□ -2.23
RPRD1AQ96P16 AL050343.2-201ENST00000607338 280 ntBASIC1.13□□□□□ -2.23
RPRD1AQ96P16 SNORD11B-201ENST00000607707 90 ntBASIC1.13□□□□□ -2.23
RPRD1AQ96P16 MIR8070-201ENST00000616510 88 ntBASIC1.13□□□□□ -2.23
RPRD1AQ96P16 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.13□□□□□ -2.23
RPRD1AQ96P16 AC022079.1-201ENST00000621546 602 ntBASIC1.13□□□□□ -2.23
RPRD1AQ96P16 AC124864.2-201ENST00000624736 186 ntBASIC1.13□□□□□ -2.23
RPRD1AQ96P16 AC068137.3-201ENST00000639191 341 ntBASIC1.13□□□□□ -2.23
RPRD1AQ96P16 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
RPRD1AQ96P16 RNU1-22P-201ENST00000363334 158 ntBASIC1.12□□□□□ -2.23
RPRD1AQ96P16 Y_RNA.151-201ENST00000363566 112 ntBASIC1.12□□□□□ -2.23
RPRD1AQ96P16 SNORD115-8-201ENST00000363856 82 ntBASIC1.12□□□□□ -2.23
RPRD1AQ96P16 Y_RNA.238-201ENST00000364441 102 ntBASIC1.12□□□□□ -2.23
RPRD1AQ96P16 SNORD115-38-201ENST00000365037 82 ntBASIC1.12□□□□□ -2.23
RPRD1AQ96P16 RNU6-1240P-201ENST00000365155 104 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms