Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 AC022202.1-201ENST00000613515 211 ntBASIC1.98□□□□□ -2.09
NECTIN4Q96NY8 AC084768.2-201ENST00000622736 221 ntBASIC1.98□□□□□ -2.09
NECTIN4Q96NY8 AC091932.3-201ENST00000624223 323 ntBASIC1.98□□□□□ -2.09
NECTIN4Q96NY8 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.98□□□□□ -2.09
NECTIN4Q96NY8 MIR1248-201ENST00000629190 106 ntBASIC1.98□□□□□ -2.09
NECTIN4Q96NY8 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
NECTIN4Q96NY8 ZNF702P-202ENST00000434269 1966 ntBASIC1.98□□□□□ -2.09
NECTIN4Q96NY8 AC073544.1-201ENST00000600110 1595 ntBASIC1.98□□□□□ -2.09
NECTIN4Q96NY8 MTND5P10-201ENST00000603719 1809 ntBASIC1.97□□□□□ -2.09
NECTIN4Q96NY8 RNU6-26P-201ENST00000383985 107 ntBASIC1.97□□□□□ -2.09
NECTIN4Q96NY8 Y_RNA.419-201ENST00000384041 102 ntBASIC1.97□□□□□ -2.09
NECTIN4Q96NY8 MIR1294-201ENST00000408503 142 ntBASIC1.97□□□□□ -2.09
NECTIN4Q96NY8 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
NECTIN4Q96NY8 MTCYBP10-201ENST00000424905 650 ntBASIC1.97□□□□□ -2.09
NECTIN4Q96NY8 AL353997.1-201ENST00000432936 108 ntBASIC1.97□□□□□ -2.09
NECTIN4Q96NY8 AL353689.1-201ENST00000438895 199 ntBASIC1.97□□□□□ -2.09
NECTIN4Q96NY8 AL035666.1-201ENST00000446195 348 ntBASIC1.97□□□□□ -2.09
NECTIN4Q96NY8 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.97□□□□□ -2.09
NECTIN4Q96NY8 AC022493.2-201ENST00000506122 481 ntBASIC1.97□□□□□ -2.09
NECTIN4Q96NY8 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.97□□□□□ -2.09
NECTIN4Q96NY8 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.97□□□□□ -2.09
NECTIN4Q96NY8 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.97□□□□□ -2.09
NECTIN4Q96NY8 RPL17P51-201ENST00000605218 238 ntBASIC1.97□□□□□ -2.09
NECTIN4Q96NY8 AC133104.2-201ENST00000615272 193 ntBASIC1.97□□□□□ -2.09
NECTIN4Q96NY8 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.97□□□□□ -2.09
NECTIN4Q96NY8 AC091925.1-201ENST00000623204 462 ntBASIC1.97□□□□□ -2.09
NECTIN4Q96NY8 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
NECTIN4Q96NY8 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
NECTIN4Q96NY8 RNU6-1115P-201ENST00000362490 106 ntBASIC1.96□□□□□ -2.1
NECTIN4Q96NY8 RNU1-76P-201ENST00000362903 159 ntBASIC1.96□□□□□ -2.1
NECTIN4Q96NY8 Y_RNA.146-201ENST00000363549 102 ntBASIC1.96□□□□□ -2.1
NECTIN4Q96NY8 Y_RNA.269-201ENST00000364685 89 ntBASIC1.96□□□□□ -2.1
NECTIN4Q96NY8 RNU6-99P-201ENST00000364721 107 ntBASIC1.96□□□□□ -2.1
NECTIN4Q96NY8 SNORD42.2-201ENST00000365570 69 ntBASIC1.96□□□□□ -2.1
NECTIN4Q96NY8 Y_RNA.395-201ENST00000383945 109 ntBASIC1.96□□□□□ -2.1
NECTIN4Q96NY8 Y_RNA.463-201ENST00000384271 102 ntBASIC1.96□□□□□ -2.1
NECTIN4Q96NY8 Y_RNA.577-201ENST00000384794 101 ntBASIC1.96□□□□□ -2.1
NECTIN4Q96NY8 MIR499A-201ENST00000384903 122 ntBASIC1.96□□□□□ -2.1
NECTIN4Q96NY8 Y_RNA.579-201ENST00000390939 94 ntBASIC1.96□□□□□ -2.1
NECTIN4Q96NY8 RNU6-159P-201ENST00000391080 106 ntBASIC1.96□□□□□ -2.1
NECTIN4Q96NY8 AL627390.1-201ENST00000396055 340 ntBASIC1.96□□□□□ -2.1
NECTIN4Q96NY8 MIR190B-201ENST00000401119 79 ntBASIC1.96□□□□□ -2.1
NECTIN4Q96NY8 RNA5SP450-201ENST00000411206 102 ntBASIC1.96□□□□□ -2.1
NECTIN4Q96NY8 SRIP3-201ENST00000413200 219 ntBASIC1.96□□□□□ -2.1
NECTIN4Q96NY8 AL158823.1-201ENST00000418441 478 ntBASIC1.96□□□□□ -2.1
NECTIN4Q96NY8 MTND2P29-201ENST00000438595 412 ntBASIC1.96□□□□□ -2.1
NECTIN4Q96NY8 MRPS17P9-201ENST00000511924 393 ntBASIC1.96□□□□□ -2.1
NECTIN4Q96NY8 RNA5SP54-201ENST00000516951 92 ntBASIC1.96□□□□□ -2.1
NECTIN4Q96NY8 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.96□□□□□ -2.1
NECTIN4Q96NY8 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.96□□□□□ -2.1
NECTIN4Q96NY8 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.96□□□□□ -2.1
NECTIN4Q96NY8 MIR5002-201ENST00000584713 97 ntBASIC1.96□□□□□ -2.1
NECTIN4Q96NY8 7SK.7-201ENST00000603504 247 ntBASIC1.96□□□□□ -2.1
NECTIN4Q96NY8 AC100812.1-201ENST00000607622 580 ntBASIC1.96□□□□□ -2.1
NECTIN4Q96NY8 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
NECTIN4Q96NY8 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
NECTIN4Q96NY8 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.95□□□□□ -2.1
NECTIN4Q96NY8 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
NECTIN4Q96NY8 RNU6-661P-201ENST00000362409 107 ntBASIC1.95□□□□□ -2.1
NECTIN4Q96NY8 RNU6-490P-201ENST00000362985 107 ntBASIC1.95□□□□□ -2.1
NECTIN4Q96NY8 Y_RNA.431-201ENST00000384086 102 ntBASIC1.95□□□□□ -2.1
NECTIN4Q96NY8 RNA5SP465-201ENST00000391195 109 ntBASIC1.95□□□□□ -2.1
NECTIN4Q96NY8 RNU1-139P-201ENST00000391307 165 ntBASIC1.95□□□□□ -2.1
NECTIN4Q96NY8 AC004866.1-201ENST00000411748 78 ntBASIC1.95□□□□□ -2.1
NECTIN4Q96NY8 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.95□□□□□ -2.1
NECTIN4Q96NY8 AP1B1P2-201ENST00000416196 106 ntBASIC1.95□□□□□ -2.1
NECTIN4Q96NY8 MTND4P28-201ENST00000426217 387 ntBASIC1.95□□□□□ -2.1
NECTIN4Q96NY8 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.95□□□□□ -2.1
NECTIN4Q96NY8 Y_RNA.639-201ENST00000458981 102 ntBASIC1.95□□□□□ -2.1
NECTIN4Q96NY8 TOMM22P6-201ENST00000465035 409 ntBASIC1.95□□□□□ -2.1
NECTIN4Q96NY8 AC027575.1-201ENST00000481064 460 ntBASIC1.95□□□□□ -2.1
NECTIN4Q96NY8 TRMT112P2-201ENST00000512910 132 ntBASIC1.95□□□□□ -2.1
NECTIN4Q96NY8 RNU6-1198P-201ENST00000516904 67 ntBASIC1.95□□□□□ -2.1
NECTIN4Q96NY8 RNU6-250P-201ENST00000516958 103 ntBASIC1.95□□□□□ -2.1
NECTIN4Q96NY8 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.95□□□□□ -2.1
NECTIN4Q96NY8 MIR4255-201ENST00000579351 72 ntBASIC1.95□□□□□ -2.1
NECTIN4Q96NY8 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.95□□□□□ -2.1
NECTIN4Q96NY8 AL096840.1-201ENST00000603287 93 ntBASIC1.95□□□□□ -2.1
NECTIN4Q96NY8 CYP2C61P-201ENST00000604072 290 ntBASIC1.95□□□□□ -2.1
NECTIN4Q96NY8 AL080274.1-201ENST00000605565 220 ntBASIC1.95□□□□□ -2.1
NECTIN4Q96NY8 AC005296.1-201ENST00000616145 209 ntBASIC1.95□□□□□ -2.1
NECTIN4Q96NY8 AC087588.2-201ENST00000617667 426 ntBASIC1.95□□□□□ -2.1
NECTIN4Q96NY8 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.95□□□□□ -2.1
NECTIN4Q96NY8 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.95□□□□□ -2.1
NECTIN4Q96NY8 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
NECTIN4Q96NY8 Y_RNA.5-201ENST00000362334 102 ntBASIC1.94□□□□□ -2.1
NECTIN4Q96NY8 Y_RNA.106-201ENST00000363189 100 ntBASIC1.94□□□□□ -2.1
NECTIN4Q96NY8 Y_RNA.197-201ENST00000364004 102 ntBASIC1.94□□□□□ -2.1
NECTIN4Q96NY8 Y_RNA.319-201ENST00000365138 92 ntBASIC1.94□□□□□ -2.1
NECTIN4Q96NY8 RNU6-234P-201ENST00000365229 104 ntBASIC1.94□□□□□ -2.1
NECTIN4Q96NY8 Y_RNA.508-201ENST00000384502 114 ntBASIC1.94□□□□□ -2.1
NECTIN4Q96NY8 MIR10B-201ENST00000385011 110 ntBASIC1.94□□□□□ -2.1
NECTIN4Q96NY8 MIR9-3-201ENST00000385084 90 ntBASIC1.94□□□□□ -2.1
NECTIN4Q96NY8 MIR549A-201ENST00000385268 96 ntBASIC1.94□□□□□ -2.1
NECTIN4Q96NY8 RNU6-700P-201ENST00000391043 107 ntBASIC1.94□□□□□ -2.1
NECTIN4Q96NY8 AL033519.2-201ENST00000403958 392 ntBASIC1.94□□□□□ -2.1
NECTIN4Q96NY8 RNU6-1156P-201ENST00000410365 100 ntBASIC1.94□□□□□ -2.1
NECTIN4Q96NY8 RPS20P15-201ENST00000412792 311 ntBASIC1.94□□□□□ -2.1
NECTIN4Q96NY8 AC018865.2-201ENST00000423631 129 ntBASIC1.94□□□□□ -2.1
NECTIN4Q96NY8 RPL23AP50-201ENST00000434149 455 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms