Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 RNU6-862P-201ENST00000362804 105 ntBASIC-1.18□□□□□ -2.6
CFAP54Q96N23 SNORD18.1-201ENST00000363807 70 ntBASIC-1.18□□□□□ -2.6
CFAP54Q96N23 RNU6-343P-201ENST00000364709 104 ntBASIC-1.18□□□□□ -2.6
CFAP54Q96N23 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-1.18□□□□□ -2.6
CFAP54Q96N23 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-1.18□□□□□ -2.6
CFAP54Q96N23 RNU4ATAC10P-201ENST00000516967 122 ntBASIC-1.18□□□□□ -2.6
CFAP54Q96N23 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC-1.18□□□□□ -2.6
CFAP54Q96N23 CR383656.7-201ENST00000548164 174 ntBASIC-1.18□□□□□ -2.6
CFAP54Q96N23 AC010525.2-201ENST00000590920 195 ntBASIC-1.18□□□□□ -2.6
CFAP54Q96N23 Z99289.3-201ENST00000605586 594 ntBASIC-1.18□□□□□ -2.6
CFAP54Q96N23 SNORD38B-202ENST00000625943 69 ntBASIC-1.18□□□□□ -2.6
CFAP54Q96N23 Y_RNA.135-201ENST00000363439 95 ntBASIC-1.19□□□□□ -2.6
CFAP54Q96N23 SNORA2B-201ENST00000384583 137 ntBASIC-1.19□□□□□ -2.6
CFAP54Q96N23 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-1.19□□□□□ -2.6
CFAP54Q96N23 AC097462.1-201ENST00000514125 324 ntBASIC-1.19□□□□□ -2.6
CFAP54Q96N23 AC124947.2-202ENST00000552735 133 ntBASIC-1.19□□□□□ -2.6
CFAP54Q96N23 MIR5706-201ENST00000579841 80 ntBASIC-1.19□□□□□ -2.6
CFAP54Q96N23 MIR4677-201ENST00000584153 80 ntBASIC-1.19□□□□□ -2.6
CFAP54Q96N23 AC025588.3-201ENST00000604182 274 ntBASIC-1.19□□□□□ -2.6
CFAP54Q96N23 AC131235.4-201ENST00000609288 620 ntBASIC-1.19□□□□□ -2.6
CFAP54Q96N23 AC017104.5-201ENST00000637647 639 ntBASIC-1.19□□□□□ -2.6
CFAP54Q96N23 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.19□□□□□ -2.6
CFAP54Q96N23 RPL31P54-201ENST00000429803 370 ntBASIC-1.19□□□□□ -2.6
CFAP54Q96N23 AL627311.1-201ENST00000431514 115 ntBASIC-1.19□□□□□ -2.6
CFAP54Q96N23 XACT-201ENST00000468762 497 ntTSL 5 BASIC-1.19□□□□□ -2.6
CFAP54Q96N23 RNU6-1232P-201ENST00000516299 86 ntBASIC-1.19□□□□□ -2.6
CFAP54Q96N23 RNU6-977P-201ENST00000516411 103 ntBASIC-1.19□□□□□ -2.6
CFAP54Q96N23 RNU6-448P-201ENST00000517052 107 ntBASIC-1.19□□□□□ -2.6
CFAP54Q96N23 AC010133.1-201ENST00000615809 842 ntBASIC-1.19□□□□□ -2.6
CFAP54Q96N23 AC084368.1-201ENST00000620935 65 ntBASIC-1.19□□□□□ -2.6
CFAP54Q96N23 SEC63P2-201ENST00000503863 1939 ntBASIC-1.19□□□□□ -2.6
CFAP54Q96N23 RNU4-76P-201ENST00000364509 141 ntBASIC-1.19□□□□□ -2.6
CFAP54Q96N23 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-1.19□□□□□ -2.6
CFAP54Q96N23 AC107952.2-201ENST00000606048 486 ntBASIC-1.19□□□□□ -2.6
CFAP54Q96N23 AC239868.4-201ENST00000608318 671 ntBASIC-1.19□□□□□ -2.6
CFAP54Q96N23 AC018926.3-201ENST00000618841 406 ntBASIC-1.19□□□□□ -2.6
CFAP54Q96N23 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC-1.2□□□□□ -2.6
CFAP54Q96N23 RNU6-199P-201ENST00000362954 107 ntBASIC-1.2□□□□□ -2.6
CFAP54Q96N23 USP9YP13-201ENST00000417797 480 ntBASIC-1.2□□□□□ -2.6
CFAP54Q96N23 AL356583.2-201ENST00000426536 280 ntBASIC-1.2□□□□□ -2.6
CFAP54Q96N23 AC137800.2-201ENST00000574375 120 ntBASIC-1.2□□□□□ -2.6
CFAP54Q96N23 AC134878.1-201ENST00000619901 243 ntBASIC-1.2□□□□□ -2.6
CFAP54Q96N23 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.2□□□□□ -2.6
CFAP54Q96N23 SNORA36A-201ENST00000384221 132 ntBASIC-1.2□□□□□ -2.6
CFAP54Q96N23 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC-1.2□□□□□ -2.6
CFAP54Q96N23 YWHAEP3-201ENST00000582767 121 ntBASIC-1.2□□□□□ -2.6
CFAP54Q96N23 snoU2_19.1-201ENST00000362361 80 ntBASIC-1.21□□□□□ -2.6
CFAP54Q96N23 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.21□□□□□ -2.6
CFAP54Q96N23 SNORA1-201ENST00000384107 130 ntBASIC-1.21□□□□□ -2.6
CFAP54Q96N23 RNU6-432P-201ENST00000384196 109 ntBASIC-1.21□□□□□ -2.6
CFAP54Q96N23 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-1.21□□□□□ -2.6
CFAP54Q96N23 AP000870.1-201ENST00000472927 406 ntBASIC-1.21□□□□□ -2.6
CFAP54Q96N23 AC018448.1-201ENST00000552843 316 ntBASIC-1.21□□□□□ -2.6
CFAP54Q96N23 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC-1.21□□□□□ -2.6
CFAP54Q96N23 AC090186.1-201ENST00000605991 572 ntBASIC-1.21□□□□□ -2.6
CFAP54Q96N23 SNORD56B-201ENST00000384713 71 ntBASIC-1.21□□□□□ -2.6
CFAP54Q96N23 SNORD100-201ENST00000408573 76 ntBASIC-1.21□□□□□ -2.6
CFAP54Q96N23 ERLEC1P1-201ENST00000433806 578 ntBASIC-1.21□□□□□ -2.6
CFAP54Q96N23 SUMO1P2-201ENST00000452524 304 ntBASIC-1.21□□□□□ -2.6
CFAP54Q96N23 TPRKBP2-201ENST00000565969 475 ntBASIC-1.21□□□□□ -2.6
CFAP54Q96N23 AC091135.1-201ENST00000585943 307 ntBASIC-1.21□□□□□ -2.6
CFAP54Q96N23 AC021851.1-201ENST00000608537 1082 ntBASIC-1.21□□□□□ -2.6
CFAP54Q96N23 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC-1.21□□□□□ -2.6
CFAP54Q96N23 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-1.21□□□□□ -2.6
CFAP54Q96N23 RNU6-1029P-201ENST00000384109 107 ntBASIC-1.21□□□□□ -2.6
CFAP54Q96N23 SNORD64-201ENST00000386683 67 ntBASIC-1.21□□□□□ -2.6
CFAP54Q96N23 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-1.21□□□□□ -2.6
CFAP54Q96N23 RNU6-1304P-201ENST00000411374 106 ntBASIC-1.21□□□□□ -2.6
CFAP54Q96N23 FO393419.3-201ENST00000428741 282 ntBASIC-1.21□□□□□ -2.6
CFAP54Q96N23 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-1.21□□□□□ -2.6
CFAP54Q96N23 MTND2P7-201ENST00000521337 640 ntBASIC-1.21□□□□□ -2.6
CFAP54Q96N23 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC-1.21□□□□□ -2.6
CFAP54Q96N23 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.21□□□□□ -2.6
CFAP54Q96N23 MIR4742-201ENST00000581069 85 ntBASIC-1.21□□□□□ -2.6
CFAP54Q96N23 AL929325.1-201ENST00000603096 117 ntBASIC-1.21□□□□□ -2.6
CFAP54Q96N23 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-1.21□□□□□ -2.6
CFAP54Q96N23 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-1.21□□□□□ -2.6
CFAP54Q96N23 MIR517B-201ENST00000385102 67 ntBASIC-1.22□□□□□ -2.6
CFAP54Q96N23 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-1.22□□□□□ -2.6
CFAP54Q96N23 TPT1P7-201ENST00000458300 517 ntBASIC-1.22□□□□□ -2.6
CFAP54Q96N23 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-1.22□□□□□ -2.6
CFAP54Q96N23 UTP23-205ENST00000520733 369 ntTSL 3 BASIC-1.22□□□□□ -2.6
CFAP54Q96N23 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-1.22□□□□□ -2.6
CFAP54Q96N23 AC005332.6-201ENST00000613178 446 ntBASIC-1.22□□□□□ -2.6
CFAP54Q96N23 RNU6-730P-201ENST00000383954 104 ntBASIC-1.22□□□□□ -2.61
CFAP54Q96N23 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.22□□□□□ -2.61
CFAP54Q96N23 RNU6-1127P-201ENST00000384580 107 ntBASIC-1.22□□□□□ -2.61
CFAP54Q96N23 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC-1.22□□□□□ -2.61
CFAP54Q96N23 AL031779.1-201ENST00000415663 330 ntBASIC-1.22□□□□□ -2.61
CFAP54Q96N23 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-1.22□□□□□ -2.61
CFAP54Q96N23 AC013828.1-201ENST00000481845 158 ntBASIC-1.22□□□□□ -2.61
CFAP54Q96N23 MTND2P33-201ENST00000506452 1031 ntBASIC-1.22□□□□□ -2.61
CFAP54Q96N23 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.22□□□□□ -2.61
CFAP54Q96N23 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC-1.22□□□□□ -2.61
CFAP54Q96N23 RPL21P9-201ENST00000556149 474 ntBASIC-1.22□□□□□ -2.61
CFAP54Q96N23 MIR655-201ENST00000362159 97 ntBASIC-1.23□□□□□ -2.61
CFAP54Q96N23 RNU6-743P-201ENST00000364151 106 ntBASIC-1.23□□□□□ -2.61
CFAP54Q96N23 Y_RNA.234-201ENST00000364409 97 ntBASIC-1.23□□□□□ -2.61
CFAP54Q96N23 Y_RNA.332-201ENST00000365271 113 ntBASIC-1.23□□□□□ -2.61
CFAP54Q96N23 TMSB4XP8-201ENST00000402089 135 ntBASIC-1.23□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms