Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 MTCYBP36-201ENST00000404146 440 ntBASIC0.19□□□□□ -2.38
ALPK3Q96L96 AC244098.3-201ENST00000424803 96 ntBASIC0.19□□□□□ -2.38
ALPK3Q96L96 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.19□□□□□ -2.38
ALPK3Q96L96 RPEP5-201ENST00000441137 268 ntBASIC0.19□□□□□ -2.38
ALPK3Q96L96 AC067940.1-201ENST00000458411 300 ntBASIC0.19□□□□□ -2.38
ALPK3Q96L96 AC025465.4-201ENST00000513422 638 ntBASIC0.19□□□□□ -2.38
ALPK3Q96L96 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.19□□□□□ -2.38
ALPK3Q96L96 SNORD111.1-201ENST00000516421 86 ntBASIC0.19□□□□□ -2.38
ALPK3Q96L96 AC091805.2-201ENST00000603848 235 ntBASIC0.19□□□□□ -2.38
ALPK3Q96L96 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.19□□□□□ -2.38
ALPK3Q96L96 AC006001.4-201ENST00000622243 395 ntBASIC0.19□□□□□ -2.38
ALPK3Q96L96 U6.114-201ENST00000636407 96 ntBASIC0.19□□□□□ -2.38
ALPK3Q96L96 U6.108-201ENST00000637764 58 ntBASIC0.19□□□□□ -2.38
ALPK3Q96L96 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
ALPK3Q96L96 AC090625.1-201ENST00000357130 210 ntBASIC0.19□□□□□ -2.38
ALPK3Q96L96 Y_RNA.136-201ENST00000363444 102 ntBASIC0.19□□□□□ -2.38
ALPK3Q96L96 Y_RNA.504-201ENST00000384481 104 ntBASIC0.19□□□□□ -2.38
ALPK3Q96L96 RNU6-757P-201ENST00000410334 100 ntBASIC0.19□□□□□ -2.38
ALPK3Q96L96 AC004866.1-201ENST00000411748 78 ntBASIC0.19□□□□□ -2.38
ALPK3Q96L96 RPS3AP1-201ENST00000413190 320 ntBASIC0.19□□□□□ -2.38
ALPK3Q96L96 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.19□□□□□ -2.38
ALPK3Q96L96 MTND1P20-201ENST00000430341 950 ntBASIC0.19□□□□□ -2.38
ALPK3Q96L96 MTATP6P16-201ENST00000434543 526 ntBASIC0.19□□□□□ -2.38
ALPK3Q96L96 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.19□□□□□ -2.38
ALPK3Q96L96 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.19□□□□□ -2.38
ALPK3Q96L96 AC074290.1-201ENST00000448883 135 ntBASIC0.19□□□□□ -2.38
ALPK3Q96L96 snoU13.25-201ENST00000458945 104 ntBASIC0.19□□□□□ -2.38
ALPK3Q96L96 MTND1P15-201ENST00000579262 949 ntBASIC0.19□□□□□ -2.38
ALPK3Q96L96 AC091178.2-201ENST00000584401 117 ntBASIC0.19□□□□□ -2.38
ALPK3Q96L96 Z99497.2-201ENST00000603634 310 ntBASIC0.19□□□□□ -2.38
ALPK3Q96L96 AL359999.1-201ENST00000604513 294 ntBASIC0.19□□□□□ -2.38
ALPK3Q96L96 AC100812.1-201ENST00000607622 580 ntBASIC0.19□□□□□ -2.38
ALPK3Q96L96 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.19□□□□□ -2.38
ALPK3Q96L96 AC009159.2-201ENST00000617603 606 ntBASIC0.19□□□□□ -2.38
ALPK3Q96L96 MIR103A2-201ENST00000362154 78 ntBASIC0.18□□□□□ -2.38
ALPK3Q96L96 RNU6-179P-201ENST00000363350 107 ntBASIC0.18□□□□□ -2.38
ALPK3Q96L96 RNY4P3-201ENST00000365254 95 ntBASIC0.18□□□□□ -2.38
ALPK3Q96L96 RNU6-190P-201ENST00000384154 102 ntBASIC0.18□□□□□ -2.38
ALPK3Q96L96 RNU6-809P-201ENST00000384461 107 ntBASIC0.18□□□□□ -2.38
ALPK3Q96L96 SNORD73A-201ENST00000386062 65 ntBASIC0.18□□□□□ -2.38
ALPK3Q96L96 MIR1185-1-201ENST00000408598 86 ntBASIC0.18□□□□□ -2.38
ALPK3Q96L96 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.18□□□□□ -2.38
ALPK3Q96L96 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.18□□□□□ -2.38
ALPK3Q96L96 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.18□□□□□ -2.38
ALPK3Q96L96 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.18□□□□□ -2.38
ALPK3Q96L96 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.18□□□□□ -2.38
ALPK3Q96L96 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.18□□□□□ -2.38
ALPK3Q96L96 MIR4999-201ENST00000585029 91 ntBASIC0.18□□□□□ -2.38
ALPK3Q96L96 snoZ196.1-201ENST00000625269 89 ntBASIC0.18□□□□□ -2.38
ALPK3Q96L96 RNU6-1317P-201ENST00000364582 104 ntBASIC0.17□□□□□ -2.38
ALPK3Q96L96 SNORA67.2-201ENST00000384300 149 ntBASIC0.17□□□□□ -2.38
ALPK3Q96L96 MIR660-201ENST00000385235 97 ntBASIC0.17□□□□□ -2.38
ALPK3Q96L96 RNU6-550P-201ENST00000391057 101 ntBASIC0.17□□□□□ -2.38
ALPK3Q96L96 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.17□□□□□ -2.38
ALPK3Q96L96 CETN4P-201ENST00000432407 469 ntBASIC0.17□□□□□ -2.38
ALPK3Q96L96 RPS29P27-201ENST00000463711 170 ntBASIC0.17□□□□□ -2.38
ALPK3Q96L96 AC105417.1-201ENST00000514691 285 ntBASIC0.17□□□□□ -2.38
ALPK3Q96L96 RNU6-1178P-201ENST00000516674 107 ntBASIC0.17□□□□□ -2.38
ALPK3Q96L96 RNU6-410P-201ENST00000517006 107 ntBASIC0.17□□□□□ -2.38
ALPK3Q96L96 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.17□□□□□ -2.38
ALPK3Q96L96 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.17□□□□□ -2.38
ALPK3Q96L96 FGF7P1-201ENST00000582820 288 ntBASIC0.17□□□□□ -2.38
ALPK3Q96L96 AL162730.1-201ENST00000605734 292 ntBASIC0.17□□□□□ -2.38
ALPK3Q96L96 AL157392.4-201ENST00000609756 345 ntBASIC0.17□□□□□ -2.38
ALPK3Q96L96 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.17□□□□□ -2.38
ALPK3Q96L96 RNU1-76P-201ENST00000362903 159 ntBASIC0.17□□□□□ -2.38
ALPK3Q96L96 RNU5F-6P-201ENST00000362979 116 ntBASIC0.17□□□□□ -2.38
ALPK3Q96L96 Y_RNA.124-201ENST00000363339 93 ntBASIC0.17□□□□□ -2.38
ALPK3Q96L96 RNU4-76P-201ENST00000364509 141 ntBASIC0.17□□□□□ -2.38
ALPK3Q96L96 RNU6-348P-201ENST00000384386 107 ntBASIC0.17□□□□□ -2.38
ALPK3Q96L96 RNU6-393P-201ENST00000384475 107 ntBASIC0.17□□□□□ -2.38
ALPK3Q96L96 MIR208B-201ENST00000401172 77 ntBASIC0.17□□□□□ -2.38
ALPK3Q96L96 SNORD111-201ENST00000408139 94 ntBASIC0.17□□□□□ -2.38
ALPK3Q96L96 AL117339.3-201ENST00000418733 162 ntBASIC0.17□□□□□ -2.38
ALPK3Q96L96 AL365184.2-201ENST00000431139 435 ntBASIC0.17□□□□□ -2.38
ALPK3Q96L96 GPR143P-201ENST00000434155 205 ntBASIC0.17□□□□□ -2.38
ALPK3Q96L96 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.17□□□□□ -2.38
ALPK3Q96L96 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.17□□□□□ -2.38
ALPK3Q96L96 AC245047.8-201ENST00000456455 284 ntBASIC0.17□□□□□ -2.38
ALPK3Q96L96 MTCO2P18-201ENST00000457151 658 ntBASIC0.17□□□□□ -2.38
ALPK3Q96L96 RNU6-221P-201ENST00000459541 99 ntBASIC0.17□□□□□ -2.38
ALPK3Q96L96 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
ALPK3Q96L96 AC112204.1-201ENST00000502591 103 ntBASIC0.17□□□□□ -2.38
ALPK3Q96L96 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.17□□□□□ -2.38
ALPK3Q96L96 AC022616.3-201ENST00000523940 148 ntBASIC0.17□□□□□ -2.38
ALPK3Q96L96 AC080078.2-201ENST00000603766 501 ntBASIC0.17□□□□□ -2.38
ALPK3Q96L96 AP001836.1-201ENST00000604675 523 ntBASIC0.17□□□□□ -2.38
ALPK3Q96L96 AC107308.1-201ENST00000615897 301 ntBASIC0.17□□□□□ -2.38
ALPK3Q96L96 RNU6-1327P-201ENST00000365302 105 ntBASIC0.16□□□□□ -2.38
ALPK3Q96L96 RNU6-245P-201ENST00000384020 107 ntBASIC0.16□□□□□ -2.38
ALPK3Q96L96 SNORA75.2-201ENST00000391138 150 ntBASIC0.16□□□□□ -2.38
ALPK3Q96L96 RNU6-1093P-201ENST00000391194 107 ntBASIC0.16□□□□□ -2.38
ALPK3Q96L96 SNORA75.3-201ENST00000391231 150 ntBASIC0.16□□□□□ -2.38
ALPK3Q96L96 Y_RNA.598-201ENST00000410480 95 ntBASIC0.16□□□□□ -2.38
ALPK3Q96L96 Y_RNA.608-201ENST00000410647 95 ntBASIC0.16□□□□□ -2.38
ALPK3Q96L96 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.16□□□□□ -2.38
ALPK3Q96L96 AC009237.7-201ENST00000447357 229 ntBASIC0.16□□□□□ -2.38
ALPK3Q96L96 NFU1P2-201ENST00000448700 469 ntBASIC0.16□□□□□ -2.38
ALPK3Q96L96 NDUFB4P10-201ENST00000452541 359 ntBASIC0.16□□□□□ -2.38
ALPK3Q96L96 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 288.9 ms