Protein–RNA interactions for Protein: Q96JQ5

MS4A4A, Membrane-spanning 4-domains subfamily A member 4A, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4AQ96JQ5 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.7□□□□□ -1.66
MS4A4AQ96JQ5 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.7□□□□□ -1.66
MS4A4AQ96JQ5 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.69□□□□□ -1.66
MS4A4AQ96JQ5 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
MS4A4AQ96JQ5 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
MS4A4AQ96JQ5 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.69□□□□□ -1.66
MS4A4AQ96JQ5 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
MS4A4AQ96JQ5 RNU1-105P-201ENST00000363470 161 ntBASIC4.69□□□□□ -1.66
MS4A4AQ96JQ5 RNU6-409P-201ENST00000384114 104 ntBASIC4.69□□□□□ -1.66
MS4A4AQ96JQ5 RPL21P3-201ENST00000395517 478 ntBASIC4.69□□□□□ -1.66
MS4A4AQ96JQ5 RNU6-162P-201ENST00000516228 103 ntBASIC4.69□□□□□ -1.66
MS4A4AQ96JQ5 SNORA70.24-201ENST00000517233 118 ntBASIC4.69□□□□□ -1.66
MS4A4AQ96JQ5 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.69□□□□□ -1.66
MS4A4AQ96JQ5 MIR8069-1-201ENST00000616627 86 ntBASIC4.69□□□□□ -1.66
MS4A4AQ96JQ5 MIR8069-2-201ENST00000621412 86 ntBASIC4.69□□□□□ -1.66
MS4A4AQ96JQ5 U6.105-201ENST00000637379 88 ntBASIC4.69□□□□□ -1.66
MS4A4AQ96JQ5 Clostridiales-1.3-201ENST00000637703 147 ntBASIC4.69□□□□□ -1.66
MS4A4AQ96JQ5 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
MS4A4AQ96JQ5 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
MS4A4AQ96JQ5 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
MS4A4AQ96JQ5 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
MS4A4AQ96JQ5 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
MS4A4AQ96JQ5 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
MS4A4AQ96JQ5 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
MS4A4AQ96JQ5 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
MS4A4AQ96JQ5 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
MS4A4AQ96JQ5 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
MS4A4AQ96JQ5 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
MS4A4AQ96JQ5 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
MS4A4AQ96JQ5 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
MS4A4AQ96JQ5 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
MS4A4AQ96JQ5 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
MS4A4AQ96JQ5 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
MS4A4AQ96JQ5 SNORD14E-201ENST00000364009 85 ntBASIC4.68□□□□□ -1.66
MS4A4AQ96JQ5 Y_RNA.351-201ENST00000365436 96 ntBASIC4.68□□□□□ -1.66
MS4A4AQ96JQ5 RNU6-1083P-201ENST00000384022 107 ntBASIC4.68□□□□□ -1.66
MS4A4AQ96JQ5 Y_RNA.440-201ENST00000384120 114 ntBASIC4.68□□□□□ -1.66
MS4A4AQ96JQ5 MIR767-201ENST00000390228 109 ntBASIC4.68□□□□□ -1.66
MS4A4AQ96JQ5 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
MS4A4AQ96JQ5 ABCF2P2-201ENST00000450549 296 ntBASIC4.68□□□□□ -1.66
MS4A4AQ96JQ5 SNORA18.7-201ENST00000516910 131 ntBASIC4.68□□□□□ -1.66
MS4A4AQ96JQ5 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC4.68□□□□□ -1.66
MS4A4AQ96JQ5 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.68□□□□□ -1.66
MS4A4AQ96JQ5 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
MS4A4AQ96JQ5 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
MS4A4AQ96JQ5 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
MS4A4AQ96JQ5 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
MS4A4AQ96JQ5 Z82217.1-201ENST00000625157 8149 ntBASIC4.68□□□□□ -1.66
MS4A4AQ96JQ5 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.67□□□□□ -1.66
MS4A4AQ96JQ5 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
MS4A4AQ96JQ5 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.67□□□□□ -1.66
MS4A4AQ96JQ5 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
MS4A4AQ96JQ5 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.67□□□□□ -1.66
MS4A4AQ96JQ5 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
MS4A4AQ96JQ5 RNU6-363P-201ENST00000362895 105 ntBASIC4.67□□□□□ -1.66
MS4A4AQ96JQ5 SNORD45B-201ENST00000364617 72 ntBASIC4.67□□□□□ -1.66
MS4A4AQ96JQ5 RNU6-787P-201ENST00000384032 107 ntBASIC4.67□□□□□ -1.66
MS4A4AQ96JQ5 Y_RNA.426-201ENST00000384068 113 ntBASIC4.67□□□□□ -1.66
MS4A4AQ96JQ5 Y_RNA.437-201ENST00000384113 113 ntBASIC4.67□□□□□ -1.66
MS4A4AQ96JQ5 AL445646.1-201ENST00000431784 216 ntBASIC4.67□□□□□ -1.66
MS4A4AQ96JQ5 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.67□□□□□ -1.66
MS4A4AQ96JQ5 RNU6-795P-201ENST00000516323 103 ntBASIC4.67□□□□□ -1.66
MS4A4AQ96JQ5 AC012531.4-201ENST00000616509 177 ntBASIC4.67□□□□□ -1.66
MS4A4AQ96JQ5 MIR6079-201ENST00000635807 62 ntBASIC4.67□□□□□ -1.66
MS4A4AQ96JQ5 AC080128.1-201ENST00000474389 1917 ntBASIC4.67□□□□□ -1.66
MS4A4AQ96JQ5 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
MS4A4AQ96JQ5 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.67□□□□□ -1.66
MS4A4AQ96JQ5 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
MS4A4AQ96JQ5 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
MS4A4AQ96JQ5 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
MS4A4AQ96JQ5 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.66□□□□□ -1.66
MS4A4AQ96JQ5 SNORD115-19-201ENST00000363098 82 ntBASIC4.66□□□□□ -1.66
MS4A4AQ96JQ5 SNORD115-18-201ENST00000363293 82 ntBASIC4.66□□□□□ -1.66
MS4A4AQ96JQ5 SNORD115-17-201ENST00000364612 82 ntBASIC4.66□□□□□ -1.66
MS4A4AQ96JQ5 Y_RNA.267-201ENST00000364679 109 ntBASIC4.66□□□□□ -1.66
MS4A4AQ96JQ5 Y_RNA.360-201ENST00000365512 102 ntBASIC4.66□□□□□ -1.66
MS4A4AQ96JQ5 MIR522-201ENST00000385071 87 ntBASIC4.66□□□□□ -1.66
MS4A4AQ96JQ5 SNORA3.3-201ENST00000408712 125 ntBASIC4.66□□□□□ -1.66
MS4A4AQ96JQ5 MIR1183-201ENST00000408856 89 ntBASIC4.66□□□□□ -1.66
MS4A4AQ96JQ5 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC4.66□□□□□ -1.66
MS4A4AQ96JQ5 AL353689.1-201ENST00000438895 199 ntBASIC4.66□□□□□ -1.66
MS4A4AQ96JQ5 AC087499.4-201ENST00000448505 178 ntBASIC4.66□□□□□ -1.66
MS4A4AQ96JQ5 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.66□□□□□ -1.66
MS4A4AQ96JQ5 RNU2-35P-201ENST00000516446 142 ntBASIC4.66□□□□□ -1.66
MS4A4AQ96JQ5 RNU7-25P-201ENST00000516544 62 ntBASIC4.66□□□□□ -1.66
MS4A4AQ96JQ5 SCARNA14-201ENST00000516903 136 ntBASIC4.66□□□□□ -1.66
MS4A4AQ96JQ5 RNA5SP179-201ENST00000517284 121 ntBASIC4.66□□□□□ -1.66
MS4A4AQ96JQ5 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC4.66□□□□□ -1.66
MS4A4AQ96JQ5 AC025627.2-201ENST00000576220 160 ntBASIC4.66□□□□□ -1.66
MS4A4AQ96JQ5 AC233702.9-201ENST00000581528 203 ntBASIC4.66□□□□□ -1.66
MS4A4AQ96JQ5 AC091167.4-201ENST00000605079 184 ntBASIC4.66□□□□□ -1.66
MS4A4AQ96JQ5 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
MS4A4AQ96JQ5 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.66□□□□□ -1.66
MS4A4AQ96JQ5 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
MS4A4AQ96JQ5 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
MS4A4AQ96JQ5 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
MS4A4AQ96JQ5 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
MS4A4AQ96JQ5 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
MS4A4AQ96JQ5 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
MS4A4AQ96JQ5 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms