Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AC108206.1-201ENST00000570186 4159 ntBASIC3.3□□□□□ -1.88
CHAMP1Q96JM3 RNU6-454P-201ENST00000364292 107 ntBASIC3.3□□□□□ -1.88
CHAMP1Q96JM3 SNORA67.2-201ENST00000384300 149 ntBASIC3.3□□□□□ -1.88
CHAMP1Q96JM3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CHAMP1Q96JM3 MIR320B2-201ENST00000408479 138 ntBASIC3.3□□□□□ -1.88
CHAMP1Q96JM3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.3□□□□□ -1.88
CHAMP1Q96JM3 BMS1P22-201ENST00000414726 313 ntBASIC3.3□□□□□ -1.88
CHAMP1Q96JM3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.3□□□□□ -1.88
CHAMP1Q96JM3 AC027124.2-201ENST00000428249 105 ntBASIC3.3□□□□□ -1.88
CHAMP1Q96JM3 AC004386.2-201ENST00000441858 148 ntBASIC3.3□□□□□ -1.88
CHAMP1Q96JM3 AC009237.7-201ENST00000447357 229 ntBASIC3.3□□□□□ -1.88
CHAMP1Q96JM3 AC091179.1-201ENST00000461606 579 ntBASIC3.3□□□□□ -1.88
CHAMP1Q96JM3 RN7SL297P-201ENST00000483161 293 ntBASIC3.3□□□□□ -1.88
CHAMP1Q96JM3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.3□□□□□ -1.88
CHAMP1Q96JM3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.3□□□□□ -1.88
CHAMP1Q96JM3 AC091826.1-201ENST00000514065 313 ntBASIC3.3□□□□□ -1.88
CHAMP1Q96JM3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.3□□□□□ -1.88
CHAMP1Q96JM3 GTF3AP2-201ENST00000557014 266 ntBASIC3.3□□□□□ -1.88
CHAMP1Q96JM3 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.3□□□□□ -1.88
CHAMP1Q96JM3 TCL6_2.1-201ENST00000615162 119 ntBASIC3.3□□□□□ -1.88
CHAMP1Q96JM3 MIR7111-201ENST00000619751 72 ntBASIC3.3□□□□□ -1.88
CHAMP1Q96JM3 MIR3674-201ENST00000636576 68 ntBASIC3.3□□□□□ -1.88
CHAMP1Q96JM3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CHAMP1Q96JM3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CHAMP1Q96JM3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.3□□□□□ -1.88
CHAMP1Q96JM3 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.29□□□□□ -1.88
CHAMP1Q96JM3 AC069528.2-201ENST00000624849 1991 ntBASIC3.29□□□□□ -1.88
CHAMP1Q96JM3 snoU2_19.1-201ENST00000362361 80 ntBASIC3.29□□□□□ -1.88
CHAMP1Q96JM3 Y_RNA.217-201ENST00000364214 105 ntBASIC3.29□□□□□ -1.88
CHAMP1Q96JM3 SNORA72.2-201ENST00000365028 127 ntBASIC3.29□□□□□ -1.88
CHAMP1Q96JM3 RNU6-1289P-201ENST00000384431 106 ntBASIC3.29□□□□□ -1.88
CHAMP1Q96JM3 RNU2-54P-201ENST00000410299 190 ntBASIC3.29□□□□□ -1.88
CHAMP1Q96JM3 AC009963.1-201ENST00000417265 157 ntBASIC3.29□□□□□ -1.88
CHAMP1Q96JM3 AL139281.1-201ENST00000422120 335 ntBASIC3.29□□□□□ -1.88
CHAMP1Q96JM3 EIF4EP4-201ENST00000424916 578 ntBASIC3.29□□□□□ -1.88
CHAMP1Q96JM3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.29□□□□□ -1.88
CHAMP1Q96JM3 Z98742.2-201ENST00000431564 187 ntBASIC3.29□□□□□ -1.88
CHAMP1Q96JM3 MTND2P29-201ENST00000438595 412 ntBASIC3.29□□□□□ -1.88
CHAMP1Q96JM3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.29□□□□□ -1.88
CHAMP1Q96JM3 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.29□□□□□ -1.88
CHAMP1Q96JM3 RNU7-120P-201ENST00000459334 63 ntBASIC3.29□□□□□ -1.88
CHAMP1Q96JM3 Y_RNA.641-201ENST00000459414 105 ntBASIC3.29□□□□□ -1.88
CHAMP1Q96JM3 snoU13.26-201ENST00000459452 105 ntBASIC3.29□□□□□ -1.88
CHAMP1Q96JM3 RPS29P26-201ENST00000477483 171 ntBASIC3.29□□□□□ -1.88
CHAMP1Q96JM3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.29□□□□□ -1.88
CHAMP1Q96JM3 AC090115.4-201ENST00000609970 188 ntBASIC3.29□□□□□ -1.88
CHAMP1Q96JM3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CHAMP1Q96JM3 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CHAMP1Q96JM3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CHAMP1Q96JM3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
CHAMP1Q96JM3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
CHAMP1Q96JM3 RNU1-105P-201ENST00000363470 161 ntBASIC3.28□□□□□ -1.88
CHAMP1Q96JM3 SNORA18.2-201ENST00000383865 132 ntBASIC3.28□□□□□ -1.88
CHAMP1Q96JM3 RNU6-1310P-201ENST00000384153 107 ntBASIC3.28□□□□□ -1.88
CHAMP1Q96JM3 MIR512-1-201ENST00000384913 84 ntBASIC3.28□□□□□ -1.88
CHAMP1Q96JM3 MIR767-201ENST00000390228 109 ntBASIC3.28□□□□□ -1.88
CHAMP1Q96JM3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CHAMP1Q96JM3 SNORA12-201ENST00000391162 147 ntBASIC3.28□□□□□ -1.88
CHAMP1Q96JM3 RNU2-61P-201ENST00000411069 191 ntBASIC3.28□□□□□ -1.88
CHAMP1Q96JM3 AC097463.2-201ENST00000421074 142 ntBASIC3.28□□□□□ -1.88
CHAMP1Q96JM3 AC107393.1-201ENST00000512403 346 ntBASIC3.28□□□□□ -1.88
CHAMP1Q96JM3 RNU2-12P-201ENST00000517216 168 ntBASIC3.28□□□□□ -1.88
CHAMP1Q96JM3 RNU6-711P-201ENST00000517255 106 ntBASIC3.28□□□□□ -1.88
CHAMP1Q96JM3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.28□□□□□ -1.88
CHAMP1Q96JM3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.28□□□□□ -1.88
CHAMP1Q96JM3 AC002064.3-201ENST00000623448 346 ntBASIC3.28□□□□□ -1.88
CHAMP1Q96JM3 MAPK10-362ENST00000641864 4484 ntBASIC3.28□□□□□ -1.88
CHAMP1Q96JM3 AC026241.1-201ENST00000517873 2142 ntBASIC3.28□□□□□ -1.89
CHAMP1Q96JM3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CHAMP1Q96JM3 AL359854.1-201ENST00000614203 1594 ntBASIC3.27□□□□□ -1.89
CHAMP1Q96JM3 SNORD87-201ENST00000364849 89 ntBASIC3.27□□□□□ -1.89
CHAMP1Q96JM3 Y_RNA.793-201ENST00000411222 111 ntBASIC3.27□□□□□ -1.89
CHAMP1Q96JM3 RNU6-191P-201ENST00000516295 94 ntBASIC3.27□□□□□ -1.89
CHAMP1Q96JM3 RNU2-44P-201ENST00000516795 194 ntBASIC3.27□□□□□ -1.89
CHAMP1Q96JM3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CHAMP1Q96JM3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.27□□□□□ -1.89
CHAMP1Q96JM3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.27□□□□□ -1.89
CHAMP1Q96JM3 MIR3145-201ENST00000580727 82 ntBASIC3.27□□□□□ -1.89
CHAMP1Q96JM3 AC023043.3-201ENST00000593113 385 ntBASIC3.27□□□□□ -1.89
CHAMP1Q96JM3 SNORD11B-201ENST00000607707 90 ntBASIC3.27□□□□□ -1.89
CHAMP1Q96JM3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.27□□□□□ -1.89
CHAMP1Q96JM3 AC110079.1-202ENST00000635213 138 ntBASIC3.27□□□□□ -1.89
CHAMP1Q96JM3 AC068205.3-201ENST00000636385 468 ntBASIC3.27□□□□□ -1.89
CHAMP1Q96JM3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.27□□□□□ -1.89
CHAMP1Q96JM3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CHAMP1Q96JM3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.26□□□□□ -1.89
CHAMP1Q96JM3 RNU4-80P-201ENST00000363200 141 ntBASIC3.26□□□□□ -1.89
CHAMP1Q96JM3 SNORD32B-201ENST00000364460 84 ntBASIC3.26□□□□□ -1.89
CHAMP1Q96JM3 RNU6-47P-201ENST00000383866 107 ntBASIC3.26□□□□□ -1.89
CHAMP1Q96JM3 RNU6-1264P-201ENST00000383891 107 ntBASIC3.26□□□□□ -1.89
CHAMP1Q96JM3 RNU6-514P-201ENST00000384208 107 ntBASIC3.26□□□□□ -1.89
CHAMP1Q96JM3 SNORA70B-201ENST00000384210 135 ntBASIC3.26□□□□□ -1.89
CHAMP1Q96JM3 RNU6-662P-201ENST00000384253 104 ntBASIC3.26□□□□□ -1.89
CHAMP1Q96JM3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CHAMP1Q96JM3 Y_RNA.590-201ENST00000410140 107 ntBASIC3.26□□□□□ -1.89
CHAMP1Q96JM3 SCARNA17.1-201ENST00000516211 143 ntBASIC3.26□□□□□ -1.89
CHAMP1Q96JM3 SCARNA17.2-201ENST00000516334 143 ntBASIC3.26□□□□□ -1.89
CHAMP1Q96JM3 RNU6-155P-201ENST00000516347 100 ntBASIC3.26□□□□□ -1.89
CHAMP1Q96JM3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.26□□□□□ -1.89
CHAMP1Q96JM3 AC024405.2-202ENST00000532731 184 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 188.5 ms