Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
SKA1Q96BD8 RNU6-1059P-201ENST00000363752 98 ntBASIC2.01□□□□□ -2.09
SKA1Q96BD8 RNU6-439P-201ENST00000384188 106 ntBASIC2.01□□□□□ -2.09
SKA1Q96BD8 AC074085.1-201ENST00000413598 418 ntBASIC2.01□□□□□ -2.09
SKA1Q96BD8 AL445685.2-201ENST00000422551 342 ntBASIC2.01□□□□□ -2.09
SKA1Q96BD8 RPL31P63-201ENST00000422565 375 ntBASIC2.01□□□□□ -2.09
SKA1Q96BD8 AC245047.4-201ENST00000433189 144 ntBASIC2.01□□□□□ -2.09
SKA1Q96BD8 FGF7P6-202ENST00000451282 293 ntBASIC2.01□□□□□ -2.09
SKA1Q96BD8 RN7SL274P-201ENST00000492268 272 ntBASIC2.01□□□□□ -2.09
SKA1Q96BD8 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.01□□□□□ -2.09
SKA1Q96BD8 Y_RNA.706-201ENST00000516933 99 ntBASIC2.01□□□□□ -2.09
SKA1Q96BD8 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.01□□□□□ -2.09
SKA1Q96BD8 AC100812.1-201ENST00000607622 580 ntBASIC2.01□□□□□ -2.09
SKA1Q96BD8 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.01□□□□□ -2.09
SKA1Q96BD8 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
SKA1Q96BD8 MTND4P12-201ENST00000498999 1377 ntBASIC2□□□□□ -2.09
SKA1Q96BD8 Y_RNA.405-201ENST00000383979 100 ntBASIC2□□□□□ -2.09
SKA1Q96BD8 Y_RNA.451-201ENST00000384200 100 ntBASIC2□□□□□ -2.09
SKA1Q96BD8 RNU6-793P-201ENST00000384233 104 ntBASIC2□□□□□ -2.09
SKA1Q96BD8 Y_RNA.524-201ENST00000384564 100 ntBASIC2□□□□□ -2.09
SKA1Q96BD8 Y_RNA.561-201ENST00000384694 100 ntBASIC2□□□□□ -2.09
SKA1Q96BD8 RNU6-360P-201ENST00000390944 104 ntBASIC2□□□□□ -2.09
SKA1Q96BD8 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2□□□□□ -2.09
SKA1Q96BD8 HMGN2P34-201ENST00000437647 269 ntBASIC2□□□□□ -2.09
SKA1Q96BD8 HSPE1P9-201ENST00000440046 311 ntBASIC2□□□□□ -2.09
SKA1Q96BD8 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2□□□□□ -2.09
SKA1Q96BD8 AC107399.1-201ENST00000451226 265 ntBASIC2□□□□□ -2.09
SKA1Q96BD8 NDUFB4P10-201ENST00000452541 359 ntBASIC2□□□□□ -2.09
SKA1Q96BD8 AC018710.1-201ENST00000506509 158 ntBASIC2□□□□□ -2.09
SKA1Q96BD8 RNU6-1016P-201ENST00000516689 94 ntBASIC2□□□□□ -2.09
SKA1Q96BD8 U2.15-201ENST00000611544 191 ntBASIC2□□□□□ -2.09
SKA1Q96BD8 U2.16-201ENST00000613119 191 ntBASIC2□□□□□ -2.09
SKA1Q96BD8 U2.12-201ENST00000613778 191 ntBASIC2□□□□□ -2.09
SKA1Q96BD8 U2.20-201ENST00000613956 192 ntBASIC2□□□□□ -2.09
SKA1Q96BD8 U2.9-201ENST00000615427 191 ntBASIC2□□□□□ -2.09
SKA1Q96BD8 U2.11-201ENST00000616345 191 ntBASIC2□□□□□ -2.09
SKA1Q96BD8 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2□□□□□ -2.09
SKA1Q96BD8 U2.2-201ENST00000616535 191 ntBASIC2□□□□□ -2.09
SKA1Q96BD8 U2.3-201ENST00000617785 191 ntBASIC2□□□□□ -2.09
SKA1Q96BD8 U2.19-201ENST00000618602 191 ntBASIC2□□□□□ -2.09
SKA1Q96BD8 RNU2-1-201ENST00000618664 191 ntBASIC2□□□□□ -2.09
SKA1Q96BD8 U2.6-201ENST00000619225 191 ntBASIC2□□□□□ -2.09
SKA1Q96BD8 U2.5-201ENST00000619465 191 ntBASIC2□□□□□ -2.09
SKA1Q96BD8 U2.10-201ENST00000620268 191 ntBASIC2□□□□□ -2.09
SKA1Q96BD8 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
SKA1Q96BD8 MIR424-201ENST00000362227 98 ntBASIC1.99□□□□□ -2.09
SKA1Q96BD8 U3.8-201ENST00000363675 217 ntBASIC1.99□□□□□ -2.09
SKA1Q96BD8 SNORA63D-201ENST00000364359 132 ntBASIC1.99□□□□□ -2.09
SKA1Q96BD8 RNU6-842P-201ENST00000384269 107 ntBASIC1.99□□□□□ -2.09
SKA1Q96BD8 MIR1267-201ENST00000408723 78 ntBASIC1.99□□□□□ -2.09
SKA1Q96BD8 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.99□□□□□ -2.09
SKA1Q96BD8 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.99□□□□□ -2.09
SKA1Q96BD8 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.99□□□□□ -2.09
SKA1Q96BD8 snoU13.9-201ENST00000458927 103 ntBASIC1.99□□□□□ -2.09
SKA1Q96BD8 RNU6-221P-201ENST00000459541 99 ntBASIC1.99□□□□□ -2.09
SKA1Q96BD8 AC069439.1-201ENST00000494739 167 ntBASIC1.99□□□□□ -2.09
SKA1Q96BD8 RPL23AP63-201ENST00000498752 471 ntBASIC1.99□□□□□ -2.09
SKA1Q96BD8 AC018462.2-201ENST00000605375 395 ntBASIC1.99□□□□□ -2.09
SKA1Q96BD8 Y_RNA.783-201ENST00000613546 102 ntBASIC1.99□□□□□ -2.09
SKA1Q96BD8 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SKA1Q96BD8 Y_RNA.179-201ENST00000363844 90 ntBASIC1.98□□□□□ -2.09
SKA1Q96BD8 MIR548K-201ENST00000408406 116 ntBASIC1.98□□□□□ -2.09
SKA1Q96BD8 MIR548F5-201ENST00000408421 86 ntBASIC1.98□□□□□ -2.09
SKA1Q96BD8 RNA5SP504-201ENST00000410676 117 ntBASIC1.98□□□□□ -2.09
SKA1Q96BD8 AL445305.1-201ENST00000432577 575 ntBASIC1.98□□□□□ -2.09
SKA1Q96BD8 RPS3AP52-201ENST00000435639 297 ntBASIC1.98□□□□□ -2.09
SKA1Q96BD8 AP000870.1-201ENST00000472927 406 ntBASIC1.98□□□□□ -2.09
SKA1Q96BD8 UBL5P4-201ENST00000562584 236 ntBASIC1.98□□□□□ -2.09
SKA1Q96BD8 AC005668.1-201ENST00000571142 476 ntBASIC1.98□□□□□ -2.09
SKA1Q96BD8 AC092794.1-201ENST00000612734 582 ntBASIC1.98□□□□□ -2.09
SKA1Q96BD8 RNU6-1240P-201ENST00000365155 104 ntBASIC1.97□□□□□ -2.09
SKA1Q96BD8 AL139156.1-201ENST00000412785 841 ntBASIC1.97□□□□□ -2.09
SKA1Q96BD8 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.97□□□□□ -2.09
SKA1Q96BD8 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.97□□□□□ -2.09
SKA1Q96BD8 AC046134.1-201ENST00000514454 666 ntBASIC1.97□□□□□ -2.09
SKA1Q96BD8 RNA5SP437-201ENST00000517249 129 ntBASIC1.97□□□□□ -2.09
SKA1Q96BD8 AC025647.1-201ENST00000517879 253 ntBASIC1.97□□□□□ -2.09
SKA1Q96BD8 MTND4LP26-201ENST00000518144 282 ntBASIC1.97□□□□□ -2.09
SKA1Q96BD8 CBX3P8-201ENST00000532412 525 ntBASIC1.97□□□□□ -2.09
SKA1Q96BD8 CBX3P4-201ENST00000538909 354 ntBASIC1.97□□□□□ -2.09
SKA1Q96BD8 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.97□□□□□ -2.09
SKA1Q96BD8 AC016925.2-201ENST00000605108 242 ntBASIC1.97□□□□□ -2.09
SKA1Q96BD8 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.97□□□□□ -2.09
SKA1Q96BD8 AC084782.3-201ENST00000612282 578 ntBASIC1.97□□□□□ -2.09
SKA1Q96BD8 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.97□□□□□ -2.09
SKA1Q96BD8 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.97□□□□□ -2.09
SKA1Q96BD8 AL133216.2-202ENST00000634512 349 ntBASIC1.97□□□□□ -2.09
SKA1Q96BD8 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.97□□□□□ -2.09
SKA1Q96BD8 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
SKA1Q96BD8 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SKA1Q96BD8 RNU6-727P-201ENST00000363592 107 ntBASIC1.96□□□□□ -2.1
SKA1Q96BD8 RNU6-417P-201ENST00000384712 107 ntBASIC1.96□□□□□ -2.1
SKA1Q96BD8 RNA5SP323-201ENST00000391094 133 ntBASIC1.96□□□□□ -2.1
SKA1Q96BD8 SNORA40.18-201ENST00000391200 128 ntBASIC1.96□□□□□ -2.1
SKA1Q96BD8 USP9YP16-201ENST00000430287 407 ntBASIC1.96□□□□□ -2.1
SKA1Q96BD8 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.96□□□□□ -2.1
SKA1Q96BD8 USP9YP23-201ENST00000455085 407 ntBASIC1.96□□□□□ -2.1
SKA1Q96BD8 AC026782.1-201ENST00000512952 449 ntBASIC1.96□□□□□ -2.1
SKA1Q96BD8 AC093303.1-201ENST00000514549 295 ntBASIC1.96□□□□□ -2.1
SKA1Q96BD8 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms