Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AL391987.6-201ENST00000305671 199 ntBASIC2.84□□□□□ -1.95
CCHCR1Q8TD31 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CCHCR1Q8TD31 Y_RNA.16-201ENST00000362421 102 ntBASIC2.84□□□□□ -1.95
CCHCR1Q8TD31 RNU6-525P-201ENST00000363685 104 ntBASIC2.84□□□□□ -1.95
CCHCR1Q8TD31 Y_RNA.286-201ENST00000364813 102 ntBASIC2.84□□□□□ -1.95
CCHCR1Q8TD31 RNU6-1175P-201ENST00000365200 107 ntBASIC2.84□□□□□ -1.95
CCHCR1Q8TD31 RNU6-290P-201ENST00000365212 101 ntBASIC2.84□□□□□ -1.95
CCHCR1Q8TD31 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
CCHCR1Q8TD31 COTL1P1-201ENST00000422309 375 ntBASIC2.84□□□□□ -1.95
CCHCR1Q8TD31 SUMO1P4-201ENST00000429430 302 ntBASIC2.84□□□□□ -1.95
CCHCR1Q8TD31 AC090515.1-201ENST00000465295 476 ntBASIC2.84□□□□□ -1.95
CCHCR1Q8TD31 RNU6-1023P-201ENST00000516137 106 ntBASIC2.84□□□□□ -1.95
CCHCR1Q8TD31 DEFB108E-201ENST00000524692 240 ntBASIC2.84□□□□□ -1.95
CCHCR1Q8TD31 AP002001.1-203ENST00000534002 267 ntBASIC2.84□□□□□ -1.95
CCHCR1Q8TD31 AC022441.3-201ENST00000605737 136 ntBASIC2.84□□□□□ -1.95
CCHCR1Q8TD31 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.84□□□□□ -1.95
CCHCR1Q8TD31 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CCHCR1Q8TD31 AL365361.1-201ENST00000566942 3481 ntBASIC2.84□□□□□ -1.96
CCHCR1Q8TD31 RNU6-1264P-201ENST00000383891 107 ntBASIC2.83□□□□□ -1.96
CCHCR1Q8TD31 RNU6-1310P-201ENST00000384153 107 ntBASIC2.83□□□□□ -1.96
CCHCR1Q8TD31 MIR1294-201ENST00000408503 142 ntBASIC2.83□□□□□ -1.96
CCHCR1Q8TD31 RNU4-30P-201ENST00000410245 143 ntBASIC2.83□□□□□ -1.96
CCHCR1Q8TD31 CR769767.1-201ENST00000436337 346 ntBASIC2.83□□□□□ -1.96
CCHCR1Q8TD31 NDUFB4P10-201ENST00000452541 359 ntBASIC2.83□□□□□ -1.96
CCHCR1Q8TD31 AC107222.1-201ENST00000510899 637 ntBASIC2.83□□□□□ -1.96
CCHCR1Q8TD31 RNU6-1098P-201ENST00000516772 96 ntBASIC2.83□□□□□ -1.96
CCHCR1Q8TD31 RNU7-110P-201ENST00000516891 62 ntBASIC2.83□□□□□ -1.96
CCHCR1Q8TD31 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.83□□□□□ -1.96
CCHCR1Q8TD31 MIR3128-201ENST00000581957 66 ntBASIC2.83□□□□□ -1.96
CCHCR1Q8TD31 MIR5194-201ENST00000582634 120 ntBASIC2.83□□□□□ -1.96
CCHCR1Q8TD31 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.83□□□□□ -1.96
CCHCR1Q8TD31 MIR5739-201ENST00000619803 80 ntBASIC2.83□□□□□ -1.96
CCHCR1Q8TD31 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.83□□□□□ -1.96
CCHCR1Q8TD31 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CCHCR1Q8TD31 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CCHCR1Q8TD31 RNU6-1318P-201ENST00000365389 103 ntBASIC2.82□□□□□ -1.96
CCHCR1Q8TD31 Y_RNA.478-201ENST00000384358 107 ntBASIC2.82□□□□□ -1.96
CCHCR1Q8TD31 RNU6-21P-201ENST00000384710 107 ntBASIC2.82□□□□□ -1.96
CCHCR1Q8TD31 RNU6-847P-201ENST00000411115 108 ntBASIC2.82□□□□□ -1.96
CCHCR1Q8TD31 AC087499.2-201ENST00000432861 149 ntBASIC2.82□□□□□ -1.96
CCHCR1Q8TD31 AC023141.11-201ENST00000508864 202 ntBASIC2.82□□□□□ -1.96
CCHCR1Q8TD31 AC091826.1-201ENST00000514065 313 ntBASIC2.82□□□□□ -1.96
CCHCR1Q8TD31 RNA5SP367-201ENST00000516557 118 ntBASIC2.82□□□□□ -1.96
CCHCR1Q8TD31 LARP7P3-201ENST00000579888 337 ntBASIC2.82□□□□□ -1.96
CCHCR1Q8TD31 MIR3616-201ENST00000584070 92 ntBASIC2.82□□□□□ -1.96
CCHCR1Q8TD31 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.82□□□□□ -1.96
CCHCR1Q8TD31 AL590240.4-201ENST00000616908 390 ntBASIC2.82□□□□□ -1.96
CCHCR1Q8TD31 MIR3674-201ENST00000636576 68 ntBASIC2.82□□□□□ -1.96
CCHCR1Q8TD31 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.82□□□□□ -1.96
CCHCR1Q8TD31 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.81□□□□□ -1.96
CCHCR1Q8TD31 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.81□□□□□ -1.96
CCHCR1Q8TD31 RNA5SP393-201ENST00000363423 117 ntBASIC2.81□□□□□ -1.96
CCHCR1Q8TD31 U3.8-201ENST00000363675 217 ntBASIC2.81□□□□□ -1.96
CCHCR1Q8TD31 RNU6-461P-201ENST00000364195 107 ntBASIC2.81□□□□□ -1.96
CCHCR1Q8TD31 MIR586-201ENST00000385035 97 ntBASIC2.81□□□□□ -1.96
CCHCR1Q8TD31 RPL23AP36-201ENST00000413895 458 ntBASIC2.81□□□□□ -1.96
CCHCR1Q8TD31 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.81□□□□□ -1.96
CCHCR1Q8TD31 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.81□□□□□ -1.96
CCHCR1Q8TD31 AC107083.1-201ENST00000439643 279 ntBASIC2.81□□□□□ -1.96
CCHCR1Q8TD31 AL161788.1-201ENST00000441805 169 ntBASIC2.81□□□□□ -1.96
CCHCR1Q8TD31 HMGB3P17-201ENST00000504195 649 ntBASIC2.81□□□□□ -1.96
CCHCR1Q8TD31 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.81□□□□□ -1.96
CCHCR1Q8TD31 AC004467.1-201ENST00000615678 330 ntBASIC2.81□□□□□ -1.96
CCHCR1Q8TD31 AC091932.3-201ENST00000624223 323 ntBASIC2.81□□□□□ -1.96
CCHCR1Q8TD31 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.81□□□□□ -1.96
CCHCR1Q8TD31 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
CCHCR1Q8TD31 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.8□□□□□ -1.96
CCHCR1Q8TD31 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCHCR1Q8TD31 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CCHCR1Q8TD31 Y_RNA.20-201ENST00000362479 113 ntBASIC2.8□□□□□ -1.96
CCHCR1Q8TD31 Y_RNA.60-201ENST00000362831 98 ntBASIC2.8□□□□□ -1.96
CCHCR1Q8TD31 Y_RNA.101-201ENST00000363154 102 ntBASIC2.8□□□□□ -1.96
CCHCR1Q8TD31 SNORD87-201ENST00000364849 89 ntBASIC2.8□□□□□ -1.96
CCHCR1Q8TD31 RNU6-234P-201ENST00000365229 104 ntBASIC2.8□□□□□ -1.96
CCHCR1Q8TD31 RNU6-326P-201ENST00000365480 107 ntBASIC2.8□□□□□ -1.96
CCHCR1Q8TD31 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CCHCR1Q8TD31 RNU6-220P-201ENST00000390919 107 ntBASIC2.8□□□□□ -1.96
CCHCR1Q8TD31 MIR548H3-201ENST00000408771 118 ntBASIC2.8□□□□□ -1.96
CCHCR1Q8TD31 RNA5SP181-201ENST00000410246 98 ntBASIC2.8□□□□□ -1.96
CCHCR1Q8TD31 RNU6-1199P-201ENST00000411249 104 ntBASIC2.8□□□□□ -1.96
CCHCR1Q8TD31 AL135938.1-201ENST00000443141 297 ntBASIC2.8□□□□□ -1.96
CCHCR1Q8TD31 EEF1B2P7-201ENST00000451177 676 ntBASIC2.8□□□□□ -1.96
CCHCR1Q8TD31 AC005042.3-201ENST00000453230 174 ntBASIC2.8□□□□□ -1.96
CCHCR1Q8TD31 MTND4LP30-201ENST00000454092 297 ntBASIC2.8□□□□□ -1.96
CCHCR1Q8TD31 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.8□□□□□ -1.96
CCHCR1Q8TD31 SERF1AP1-201ENST00000514575 187 ntBASIC2.8□□□□□ -1.96
CCHCR1Q8TD31 MIR449C-201ENST00000516047 92 ntBASIC2.8□□□□□ -1.96
CCHCR1Q8TD31 RNU5F-4P-201ENST00000516581 114 ntBASIC2.8□□□□□ -1.96
CCHCR1Q8TD31 RNU1-117P-201ENST00000517041 158 ntBASIC2.8□□□□□ -1.96
CCHCR1Q8TD31 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.8□□□□□ -1.96
CCHCR1Q8TD31 ELOCP29-201ENST00000588193 334 ntBASIC2.8□□□□□ -1.96
CCHCR1Q8TD31 AC005357.1-201ENST00000588399 301 ntBASIC2.8□□□□□ -1.96
CCHCR1Q8TD31 AL356280.1-201ENST00000603614 379 ntBASIC2.8□□□□□ -1.96
CCHCR1Q8TD31 AC006386.2-201ENST00000624491 75 ntBASIC2.8□□□□□ -1.96
CCHCR1Q8TD31 AC012005.1-201ENST00000624575 75 ntBASIC2.8□□□□□ -1.96
CCHCR1Q8TD31 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.79□□□□□ -1.96
CCHCR1Q8TD31 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCHCR1Q8TD31 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCHCR1Q8TD31 SNORA72.2-201ENST00000365028 127 ntBASIC2.79□□□□□ -1.96
CCHCR1Q8TD31 Y_RNA.331-201ENST00000365267 102 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms