Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 U6.106-201ENST00000636360 105 ntBASIC2.89□□□□□ -1.95
SIMC1Q8NDZ2 AC108206.1-201ENST00000570186 4159 ntBASIC2.89□□□□□ -1.95
SIMC1Q8NDZ2 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.89□□□□□ -1.95
SIMC1Q8NDZ2 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SIMC1Q8NDZ2 MIR422A-201ENST00000362286 90 ntBASIC2.88□□□□□ -1.95
SIMC1Q8NDZ2 Y_RNA.233-201ENST00000364407 101 ntBASIC2.88□□□□□ -1.95
SIMC1Q8NDZ2 SNORD113-1-201ENST00000365321 69 ntBASIC2.88□□□□□ -1.95
SIMC1Q8NDZ2 RNA5SP240-201ENST00000365355 128 ntBASIC2.88□□□□□ -1.95
SIMC1Q8NDZ2 Y_RNA.383-201ENST00000383855 97 ntBASIC2.88□□□□□ -1.95
SIMC1Q8NDZ2 RPL23AP36-201ENST00000413895 458 ntBASIC2.88□□□□□ -1.95
SIMC1Q8NDZ2 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.88□□□□□ -1.95
SIMC1Q8NDZ2 AC078809.1-201ENST00000427601 140 ntBASIC2.88□□□□□ -1.95
SIMC1Q8NDZ2 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.88□□□□□ -1.95
SIMC1Q8NDZ2 AC244670.1-201ENST00000436879 112 ntBASIC2.88□□□□□ -1.95
SIMC1Q8NDZ2 POLR2KP2-201ENST00000438155 177 ntBASIC2.88□□□□□ -1.95
SIMC1Q8NDZ2 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.88□□□□□ -1.95
SIMC1Q8NDZ2 CYP2C59P-201ENST00000457790 269 ntBASIC2.88□□□□□ -1.95
SIMC1Q8NDZ2 SNORD2.1-201ENST00000458762 69 ntBASIC2.88□□□□□ -1.95
SIMC1Q8NDZ2 RN7SL20P-201ENST00000488827 297 ntBASIC2.88□□□□□ -1.95
SIMC1Q8NDZ2 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.88□□□□□ -1.95
SIMC1Q8NDZ2 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.88□□□□□ -1.95
SIMC1Q8NDZ2 RNY3P16-201ENST00000516338 101 ntBASIC2.88□□□□□ -1.95
SIMC1Q8NDZ2 AC055872.1-201ENST00000570978 278 ntBASIC2.88□□□□□ -1.95
SIMC1Q8NDZ2 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.88□□□□□ -1.95
SIMC1Q8NDZ2 AC005176.2-201ENST00000596933 147 ntBASIC2.88□□□□□ -1.95
SIMC1Q8NDZ2 RPL12P50-201ENST00000603116 116 ntBASIC2.88□□□□□ -1.95
SIMC1Q8NDZ2 AC006023.1-201ENST00000603944 259 ntBASIC2.88□□□□□ -1.95
SIMC1Q8NDZ2 AC093732.2-201ENST00000607950 274 ntBASIC2.88□□□□□ -1.95
SIMC1Q8NDZ2 MIR5739-201ENST00000619803 80 ntBASIC2.88□□□□□ -1.95
SIMC1Q8NDZ2 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SIMC1Q8NDZ2 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.88□□□□□ -1.95
SIMC1Q8NDZ2 AC073325.2-201ENST00000339545 159 ntBASIC2.87□□□□□ -1.95
SIMC1Q8NDZ2 RNU6-873P-201ENST00000363833 107 ntBASIC2.87□□□□□ -1.95
SIMC1Q8NDZ2 RNU6-923P-201ENST00000364753 107 ntBASIC2.87□□□□□ -1.95
SIMC1Q8NDZ2 SNORA46.1-201ENST00000391069 153 ntBASIC2.87□□□□□ -1.95
SIMC1Q8NDZ2 SNORD88.1-201ENST00000408684 91 ntBASIC2.87□□□□□ -1.95
SIMC1Q8NDZ2 Y_RNA.595-201ENST00000410403 105 ntBASIC2.87□□□□□ -1.95
SIMC1Q8NDZ2 RNU2-63P-201ENST00000410792 194 ntBASIC2.87□□□□□ -1.95
SIMC1Q8NDZ2 CYCSP48-201ENST00000417124 323 ntBASIC2.87□□□□□ -1.95
SIMC1Q8NDZ2 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.87□□□□□ -1.95
SIMC1Q8NDZ2 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.87□□□□□ -1.95
SIMC1Q8NDZ2 TMSB4XP3-201ENST00000445144 114 ntBASIC2.87□□□□□ -1.95
SIMC1Q8NDZ2 AC009237.7-201ENST00000447357 229 ntBASIC2.87□□□□□ -1.95
SIMC1Q8NDZ2 RPS29P26-201ENST00000477483 171 ntBASIC2.87□□□□□ -1.95
SIMC1Q8NDZ2 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.87□□□□□ -1.95
SIMC1Q8NDZ2 AC008885.1-201ENST00000514930 301 ntBASIC2.87□□□□□ -1.95
SIMC1Q8NDZ2 RN7SKP43-201ENST00000516173 320 ntBASIC2.87□□□□□ -1.95
SIMC1Q8NDZ2 RNU6-346P-201ENST00000516288 111 ntBASIC2.87□□□□□ -1.95
SIMC1Q8NDZ2 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.87□□□□□ -1.95
SIMC1Q8NDZ2 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.87□□□□□ -1.95
SIMC1Q8NDZ2 AC021231.3-201ENST00000558497 370 ntBASIC2.87□□□□□ -1.95
SIMC1Q8NDZ2 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.87□□□□□ -1.95
SIMC1Q8NDZ2 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.87□□□□□ -1.95
SIMC1Q8NDZ2 AL670379.2-201ENST00000604983 252 ntBASIC2.87□□□□□ -1.95
SIMC1Q8NDZ2 AC010999.1-201ENST00000611856 324 ntBASIC2.87□□□□□ -1.95
SIMC1Q8NDZ2 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.87□□□□□ -1.95
SIMC1Q8NDZ2 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
SIMC1Q8NDZ2 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
SIMC1Q8NDZ2 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SIMC1Q8NDZ2 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.86□□□□□ -1.95
SIMC1Q8NDZ2 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.86□□□□□ -1.95
SIMC1Q8NDZ2 AC092268.1-201ENST00000342691 405 ntBASIC2.86□□□□□ -1.95
SIMC1Q8NDZ2 RNU6-655P-201ENST00000362858 107 ntBASIC2.86□□□□□ -1.95
SIMC1Q8NDZ2 RNU6-1285P-201ENST00000363480 105 ntBASIC2.86□□□□□ -1.95
SIMC1Q8NDZ2 Y_RNA.240-201ENST00000364469 95 ntBASIC2.86□□□□□ -1.95
SIMC1Q8NDZ2 Y_RNA.291-201ENST00000364886 113 ntBASIC2.86□□□□□ -1.95
SIMC1Q8NDZ2 RNY1P5-201ENST00000383890 115 ntBASIC2.86□□□□□ -1.95
SIMC1Q8NDZ2 SNORD15B-201ENST00000384714 146 ntBASIC2.86□□□□□ -1.95
SIMC1Q8NDZ2 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.86□□□□□ -1.95
SIMC1Q8NDZ2 EIF4EP4-201ENST00000424916 578 ntBASIC2.86□□□□□ -1.95
SIMC1Q8NDZ2 RPL39P29-201ENST00000447779 157 ntBASIC2.86□□□□□ -1.95
SIMC1Q8NDZ2 UQCRBP2-201ENST00000447827 297 ntBASIC2.86□□□□□ -1.95
SIMC1Q8NDZ2 AC007395.1-201ENST00000451333 677 ntBASIC2.86□□□□□ -1.95
SIMC1Q8NDZ2 AC091021.1-201ENST00000468051 388 ntBASIC2.86□□□□□ -1.95
SIMC1Q8NDZ2 RPL30P12-201ENST00000474666 353 ntBASIC2.86□□□□□ -1.95
SIMC1Q8NDZ2 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.86□□□□□ -1.95
SIMC1Q8NDZ2 RNU7-200P-201ENST00000516105 62 ntBASIC2.86□□□□□ -1.95
SIMC1Q8NDZ2 RNU6-966P-201ENST00000516479 104 ntBASIC2.86□□□□□ -1.95
SIMC1Q8NDZ2 RNA5SP54-201ENST00000516951 92 ntBASIC2.86□□□□□ -1.95
SIMC1Q8NDZ2 MRPS18CP4-201ENST00000535821 231 ntBASIC2.86□□□□□ -1.95
SIMC1Q8NDZ2 AC233702.2-202ENST00000562547 291 ntBASIC2.86□□□□□ -1.95
SIMC1Q8NDZ2 AL078605.1-201ENST00000603529 500 ntBASIC2.86□□□□□ -1.95
SIMC1Q8NDZ2 AC022441.3-201ENST00000605737 136 ntBASIC2.86□□□□□ -1.95
SIMC1Q8NDZ2 AC073349.3-201ENST00000617616 186 ntBASIC2.86□□□□□ -1.95
SIMC1Q8NDZ2 AC007318.2-201ENST00000620999 243 ntBASIC2.86□□□□□ -1.95
SIMC1Q8NDZ2 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SIMC1Q8NDZ2 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.86□□□□□ -1.95
SIMC1Q8NDZ2 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SIMC1Q8NDZ2 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
SIMC1Q8NDZ2 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.85□□□□□ -1.95
SIMC1Q8NDZ2 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SIMC1Q8NDZ2 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.85□□□□□ -1.95
SIMC1Q8NDZ2 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SIMC1Q8NDZ2 Y_RNA.308-201ENST00000365043 101 ntBASIC2.85□□□□□ -1.95
SIMC1Q8NDZ2 RNU6-804P-201ENST00000384286 107 ntBASIC2.85□□□□□ -1.95
SIMC1Q8NDZ2 MIR186-201ENST00000384988 86 ntBASIC2.85□□□□□ -1.95
SIMC1Q8NDZ2 SNORA26.3-201ENST00000391119 136 ntBASIC2.85□□□□□ -1.95
SIMC1Q8NDZ2 RPS26P42-201ENST00000413485 326 ntBASIC2.85□□□□□ -1.95
SIMC1Q8NDZ2 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.85□□□□□ -1.95
SIMC1Q8NDZ2 AC012306.1-201ENST00000423267 114 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms