Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.36□□□□□ -2.35
ZNF439Q8NDP4 RMST_3.1-201ENST00000611651 109 ntBASIC0.36□□□□□ -2.35
ZNF439Q8NDP4 AC068792.1-201ENST00000621354 417 ntBASIC0.36□□□□□ -2.35
ZNF439Q8NDP4 AC139792.3-201ENST00000623525 224 ntBASIC0.36□□□□□ -2.35
ZNF439Q8NDP4 AL078596.1-201ENST00000624856 447 ntBASIC0.36□□□□□ -2.35
ZNF439Q8NDP4 AC008873.1-201ENST00000625051 138 ntBASIC0.36□□□□□ -2.35
ZNF439Q8NDP4 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
ZNF439Q8NDP4 RNU4-28P-201ENST00000364739 141 ntBASIC0.35□□□□□ -2.35
ZNF439Q8NDP4 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
ZNF439Q8NDP4 MIR10B-201ENST00000385011 110 ntBASIC0.35□□□□□ -2.35
ZNF439Q8NDP4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
ZNF439Q8NDP4 MIR320B2-201ENST00000408479 138 ntBASIC0.35□□□□□ -2.35
ZNF439Q8NDP4 RNU2-29P-201ENST00000410423 189 ntBASIC0.35□□□□□ -2.35
ZNF439Q8NDP4 RNA5SP247-201ENST00000411181 105 ntBASIC0.35□□□□□ -2.35
ZNF439Q8NDP4 BX295541.1-201ENST00000417774 250 ntBASIC0.35□□□□□ -2.35
ZNF439Q8NDP4 Z99497.1-201ENST00000421282 135 ntBASIC0.35□□□□□ -2.35
ZNF439Q8NDP4 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.35□□□□□ -2.35
ZNF439Q8NDP4 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.35□□□□□ -2.35
ZNF439Q8NDP4 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.35□□□□□ -2.35
ZNF439Q8NDP4 snoU13.25-201ENST00000458945 104 ntBASIC0.35□□□□□ -2.35
ZNF439Q8NDP4 RNU7-90P-201ENST00000459216 62 ntBASIC0.35□□□□□ -2.35
ZNF439Q8NDP4 RNU6-1037P-201ENST00000459571 107 ntBASIC0.35□□□□□ -2.35
ZNF439Q8NDP4 RNU7-94P-201ENST00000459576 63 ntBASIC0.35□□□□□ -2.35
ZNF439Q8NDP4 AC105417.1-201ENST00000514691 285 ntBASIC0.35□□□□□ -2.35
ZNF439Q8NDP4 RNU6-947P-201ENST00000516264 106 ntBASIC0.35□□□□□ -2.35
ZNF439Q8NDP4 MTND2P32-201ENST00000521584 1038 ntBASIC0.35□□□□□ -2.35
ZNF439Q8NDP4 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.35□□□□□ -2.35
ZNF439Q8NDP4 MIR4778-201ENST00000577635 80 ntBASIC0.35□□□□□ -2.35
ZNF439Q8NDP4 AC012557.2-201ENST00000605919 418 ntBASIC0.35□□□□□ -2.35
ZNF439Q8NDP4 AC004223.4-201ENST00000612426 332 ntBASIC0.35□□□□□ -2.35
ZNF439Q8NDP4 MIR6513-201ENST00000621188 64 ntBASIC0.35□□□□□ -2.35
ZNF439Q8NDP4 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.35□□□□□ -2.35
ZNF439Q8NDP4 U3.8-201ENST00000363675 217 ntBASIC0.34□□□□□ -2.36
ZNF439Q8NDP4 RNU6-1286P-201ENST00000383871 107 ntBASIC0.34□□□□□ -2.36
ZNF439Q8NDP4 RNU6-945P-201ENST00000383947 107 ntBASIC0.34□□□□□ -2.36
ZNF439Q8NDP4 RNY1P14-201ENST00000384426 108 ntBASIC0.34□□□□□ -2.36
ZNF439Q8NDP4 Y_RNA.560-201ENST00000384689 102 ntBASIC0.34□□□□□ -2.36
ZNF439Q8NDP4 MIR518E-201ENST00000385252 88 ntBASIC0.34□□□□□ -2.36
ZNF439Q8NDP4 SNORA40.3-201ENST00000390964 122 ntBASIC0.34□□□□□ -2.36
ZNF439Q8NDP4 RNU6-903P-201ENST00000391270 109 ntBASIC0.34□□□□□ -2.36
ZNF439Q8NDP4 MIR450B-201ENST00000401182 78 ntBASIC0.34□□□□□ -2.36
ZNF439Q8NDP4 RNA5SP504-201ENST00000410676 117 ntBASIC0.34□□□□□ -2.36
ZNF439Q8NDP4 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.34□□□□□ -2.36
ZNF439Q8NDP4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.34□□□□□ -2.36
ZNF439Q8NDP4 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.34□□□□□ -2.36
ZNF439Q8NDP4 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.34□□□□□ -2.36
ZNF439Q8NDP4 MTND3P9-201ENST00000429526 346 ntBASIC0.34□□□□□ -2.36
ZNF439Q8NDP4 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.34□□□□□ -2.36
ZNF439Q8NDP4 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.34□□□□□ -2.36
ZNF439Q8NDP4 MTND2P39-201ENST00000457230 764 ntBASIC0.34□□□□□ -2.36
ZNF439Q8NDP4 RNU7-99P-201ENST00000516271 62 ntBASIC0.34□□□□□ -2.36
ZNF439Q8NDP4 RNU6-917P-201ENST00000516294 104 ntBASIC0.34□□□□□ -2.36
ZNF439Q8NDP4 RNU6-229P-201ENST00000516614 102 ntBASIC0.34□□□□□ -2.36
ZNF439Q8NDP4 RNU6-344P-201ENST00000516635 111 ntBASIC0.34□□□□□ -2.36
ZNF439Q8NDP4 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.34□□□□□ -2.36
ZNF439Q8NDP4 AC018659.1-201ENST00000551083 169 ntBASIC0.34□□□□□ -2.36
ZNF439Q8NDP4 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.34□□□□□ -2.36
ZNF439Q8NDP4 PRELID3BP2-201ENST00000605362 201 ntBASIC0.34□□□□□ -2.36
ZNF439Q8NDP4 SNORA28-201ENST00000606769 126 ntBASIC0.34□□□□□ -2.36
ZNF439Q8NDP4 AC064836.2-201ENST00000609491 462 ntBASIC0.34□□□□□ -2.36
ZNF439Q8NDP4 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.34□□□□□ -2.36
ZNF439Q8NDP4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.34□□□□□ -2.36
ZNF439Q8NDP4 ELL2P3-201ENST00000457883 1602 ntBASIC0.34□□□□□ -2.36
ZNF439Q8NDP4 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.34□□□□□ -2.36
ZNF439Q8NDP4 RNU6-181P-201ENST00000363225 107 ntBASIC0.33□□□□□ -2.36
ZNF439Q8NDP4 SNORA2.2-201ENST00000365473 135 ntBASIC0.33□□□□□ -2.36
ZNF439Q8NDP4 RNU6-42P-201ENST00000384165 107 ntBASIC0.33□□□□□ -2.36
ZNF439Q8NDP4 SNORA50A-201ENST00000384225 134 ntBASIC0.33□□□□□ -2.36
ZNF439Q8NDP4 RNU6-456P-201ENST00000384493 107 ntBASIC0.33□□□□□ -2.36
ZNF439Q8NDP4 RNU6-925P-201ENST00000384629 104 ntBASIC0.33□□□□□ -2.36
ZNF439Q8NDP4 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.33□□□□□ -2.36
ZNF439Q8NDP4 RNU2-9P-201ENST00000410194 145 ntBASIC0.33□□□□□ -2.36
ZNF439Q8NDP4 RPEP5-201ENST00000441137 268 ntBASIC0.33□□□□□ -2.36
ZNF439Q8NDP4 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
ZNF439Q8NDP4 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.33□□□□□ -2.36
ZNF439Q8NDP4 RNU7-138P-201ENST00000459479 64 ntBASIC0.33□□□□□ -2.36
ZNF439Q8NDP4 AF186996.7-201ENST00000492781 209 ntBASIC0.33□□□□□ -2.36
ZNF439Q8NDP4 AC113410.1-201ENST00000505029 247 ntBASIC0.33□□□□□ -2.36
ZNF439Q8NDP4 CCDC34P1-201ENST00000507441 517 ntBASIC0.33□□□□□ -2.36
ZNF439Q8NDP4 RNU4-57P-201ENST00000515980 135 ntBASIC0.33□□□□□ -2.36
ZNF439Q8NDP4 SNORA70.12-201ENST00000516084 153 ntBASIC0.33□□□□□ -2.36
ZNF439Q8NDP4 RNU6-445P-201ENST00000516949 107 ntBASIC0.33□□□□□ -2.36
ZNF439Q8NDP4 AL137161.1-201ENST00000532231 390 ntBASIC0.33□□□□□ -2.36
ZNF439Q8NDP4 AC016957.1-201ENST00000534895 309 ntBASIC0.33□□□□□ -2.36
ZNF439Q8NDP4 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.33□□□□□ -2.36
ZNF439Q8NDP4 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.33□□□□□ -2.36
ZNF439Q8NDP4 FRG2DP-202ENST00000566967 323 ntBASIC0.33□□□□□ -2.36
ZNF439Q8NDP4 SNORA4-201ENST00000584302 138 ntBASIC0.33□□□□□ -2.36
ZNF439Q8NDP4 AC092354.1-201ENST00000606057 376 ntBASIC0.33□□□□□ -2.36
ZNF439Q8NDP4 U2.17-201ENST00000611454 95 ntBASIC0.33□□□□□ -2.36
ZNF439Q8NDP4 AP001506.1-201ENST00000615444 211 ntBASIC0.33□□□□□ -2.36
ZNF439Q8NDP4 MIR5087-201ENST00000635826 76 ntBASIC0.33□□□□□ -2.36
ZNF439Q8NDP4 RNU6-163P-201ENST00000384396 106 ntBASIC0.32□□□□□ -2.36
ZNF439Q8NDP4 SNORD116-13-201ENST00000384408 92 ntBASIC0.32□□□□□ -2.36
ZNF439Q8NDP4 RNU6-1186P-201ENST00000410429 97 ntBASIC0.32□□□□□ -2.36
ZNF439Q8NDP4 CYCSP46-201ENST00000423569 204 ntBASIC0.32□□□□□ -2.36
ZNF439Q8NDP4 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.32□□□□□ -2.36
ZNF439Q8NDP4 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.32□□□□□ -2.36
ZNF439Q8NDP4 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.32□□□□□ -2.36
ZNF439Q8NDP4 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 202.9 ms