Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 RNU6-1305P-201ENST00000364353 104 ntBASIC1.42□□□□□ -2.18
CCDC71LQ8N9Z2 RNA5SP363-201ENST00000365072 115 ntBASIC1.42□□□□□ -2.18
CCDC71LQ8N9Z2 MIR300-201ENST00000401138 83 ntBASIC1.42□□□□□ -2.18
CCDC71LQ8N9Z2 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.42□□□□□ -2.18
CCDC71LQ8N9Z2 MIR1283-1-201ENST00000408494 87 ntBASIC1.42□□□□□ -2.18
CCDC71LQ8N9Z2 RNA5SP100-201ENST00000410903 110 ntBASIC1.42□□□□□ -2.18
CCDC71LQ8N9Z2 RNA5SP59-201ENST00000410922 110 ntBASIC1.42□□□□□ -2.18
CCDC71LQ8N9Z2 NCOR1P3-201ENST00000420479 303 ntBASIC1.42□□□□□ -2.18
CCDC71LQ8N9Z2 AC009237.7-201ENST00000447357 229 ntBASIC1.42□□□□□ -2.18
CCDC71LQ8N9Z2 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.42□□□□□ -2.18
CCDC71LQ8N9Z2 RNU7-87P-201ENST00000459343 62 ntBASIC1.42□□□□□ -2.18
CCDC71LQ8N9Z2 AC010531.2-201ENST00000465012 153 ntBASIC1.42□□□□□ -2.18
CCDC71LQ8N9Z2 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.42□□□□□ -2.18
CCDC71LQ8N9Z2 AP000870.1-201ENST00000472927 406 ntBASIC1.42□□□□□ -2.18
CCDC71LQ8N9Z2 Y_RNA.706-201ENST00000516933 99 ntBASIC1.42□□□□□ -2.18
CCDC71LQ8N9Z2 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.42□□□□□ -2.18
CCDC71LQ8N9Z2 AC134698.4-201ENST00000523451 826 ntBASIC1.42□□□□□ -2.18
CCDC71LQ8N9Z2 AC022254.1-201ENST00000567857 235 ntBASIC1.42□□□□□ -2.18
CCDC71LQ8N9Z2 MIR548S-201ENST00000581352 82 ntBASIC1.42□□□□□ -2.18
CCDC71LQ8N9Z2 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.42□□□□□ -2.18
CCDC71LQ8N9Z2 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.42□□□□□ -2.18
CCDC71LQ8N9Z2 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.42□□□□□ -2.18
CCDC71LQ8N9Z2 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.42□□□□□ -2.18
CCDC71LQ8N9Z2 AL669831.3-213ENST00000636676 183 ntBASIC1.42□□□□□ -2.18
CCDC71LQ8N9Z2 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.42□□□□□ -2.18
CCDC71LQ8N9Z2 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.42□□□□□ -2.18
CCDC71LQ8N9Z2 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
CCDC71LQ8N9Z2 RNU6-222P-201ENST00000362438 107 ntBASIC1.41□□□□□ -2.18
CCDC71LQ8N9Z2 Y_RNA.106-201ENST00000363189 100 ntBASIC1.41□□□□□ -2.18
CCDC71LQ8N9Z2 Y_RNA.490-201ENST00000384413 102 ntBASIC1.41□□□□□ -2.18
CCDC71LQ8N9Z2 RNU6-700P-201ENST00000391043 107 ntBASIC1.41□□□□□ -2.18
CCDC71LQ8N9Z2 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.41□□□□□ -2.18
CCDC71LQ8N9Z2 MTND3P23-201ENST00000431980 347 ntBASIC1.41□□□□□ -2.18
CCDC71LQ8N9Z2 MTCO1P44-201ENST00000441935 243 ntBASIC1.41□□□□□ -2.18
CCDC71LQ8N9Z2 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.41□□□□□ -2.18
CCDC71LQ8N9Z2 MTND4P18-201ENST00000447010 465 ntBASIC1.41□□□□□ -2.18
CCDC71LQ8N9Z2 AC016717.1-201ENST00000448918 286 ntBASIC1.41□□□□□ -2.18
CCDC71LQ8N9Z2 AC010409.1-201ENST00000487382 476 ntBASIC1.41□□□□□ -2.18
CCDC71LQ8N9Z2 AC091951.2-201ENST00000500762 203 ntBASIC1.41□□□□□ -2.18
CCDC71LQ8N9Z2 AC008549.1-201ENST00000512900 643 ntBASIC1.41□□□□□ -2.18
CCDC71LQ8N9Z2 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.41□□□□□ -2.18
CCDC71LQ8N9Z2 RNU6-507P-201ENST00000516045 100 ntBASIC1.41□□□□□ -2.18
CCDC71LQ8N9Z2 RNU6-559P-201ENST00000516151 98 ntBASIC1.41□□□□□ -2.18
CCDC71LQ8N9Z2 RNU6-1041P-201ENST00000516254 102 ntBASIC1.41□□□□□ -2.18
CCDC71LQ8N9Z2 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.41□□□□□ -2.18
CCDC71LQ8N9Z2 MIR5695-201ENST00000579717 85 ntBASIC1.41□□□□□ -2.18
CCDC71LQ8N9Z2 AC113139.1-201ENST00000605049 239 ntBASIC1.41□□□□□ -2.18
CCDC71LQ8N9Z2 AC100812.1-201ENST00000607622 580 ntBASIC1.41□□□□□ -2.18
CCDC71LQ8N9Z2 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.4□□□□□ -2.18
CCDC71LQ8N9Z2 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CCDC71LQ8N9Z2 RNU6-862P-201ENST00000362804 105 ntBASIC1.4□□□□□ -2.19
CCDC71LQ8N9Z2 RNU6-727P-201ENST00000363592 107 ntBASIC1.4□□□□□ -2.19
CCDC71LQ8N9Z2 SNORD115-8-201ENST00000363856 82 ntBASIC1.4□□□□□ -2.19
CCDC71LQ8N9Z2 SNORD115-38-201ENST00000365037 82 ntBASIC1.4□□□□□ -2.19
CCDC71LQ8N9Z2 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.4□□□□□ -2.19
CCDC71LQ8N9Z2 RNU6-245P-201ENST00000384020 107 ntBASIC1.4□□□□□ -2.19
CCDC71LQ8N9Z2 Y_RNA.474-201ENST00000384341 102 ntBASIC1.4□□□□□ -2.19
CCDC71LQ8N9Z2 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
CCDC71LQ8N9Z2 RNU6-159P-201ENST00000391080 106 ntBASIC1.4□□□□□ -2.19
CCDC71LQ8N9Z2 SNORA3.2-201ENST00000408221 125 ntBASIC1.4□□□□□ -2.19
CCDC71LQ8N9Z2 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CCDC71LQ8N9Z2 AC092423.1-201ENST00000430165 186 ntBASIC1.4□□□□□ -2.19
CCDC71LQ8N9Z2 RNU1-131P-201ENST00000458943 161 ntBASIC1.4□□□□□ -2.19
CCDC71LQ8N9Z2 YWHAEP4-201ENST00000505390 198 ntBASIC1.4□□□□□ -2.19
CCDC71LQ8N9Z2 RNU6-120P-201ENST00000516077 103 ntBASIC1.4□□□□□ -2.19
CCDC71LQ8N9Z2 SNORA31.17-201ENST00000516953 127 ntBASIC1.4□□□□□ -2.19
CCDC71LQ8N9Z2 APOOP3-201ENST00000536787 586 ntBASIC1.4□□□□□ -2.19
CCDC71LQ8N9Z2 MIR5690-201ENST00000583739 73 ntBASIC1.4□□□□□ -2.19
CCDC71LQ8N9Z2 AC005899.2-201ENST00000584353 90 ntBASIC1.4□□□□□ -2.19
CCDC71LQ8N9Z2 AC005786.1-201ENST00000588553 154 ntBASIC1.4□□□□□ -2.19
CCDC71LQ8N9Z2 AC016925.2-201ENST00000605108 242 ntBASIC1.4□□□□□ -2.19
CCDC71LQ8N9Z2 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.4□□□□□ -2.19
CCDC71LQ8N9Z2 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.4□□□□□ -2.19
CCDC71LQ8N9Z2 AC092794.2-201ENST00000620933 563 ntBASIC1.4□□□□□ -2.19
CCDC71LQ8N9Z2 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.4□□□□□ -2.19
CCDC71LQ8N9Z2 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
CCDC71LQ8N9Z2 AL356292.1-201ENST00000283110 373 ntBASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 RNU6-1188P-201ENST00000363795 107 ntBASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 RNU6-280P-201ENST00000364145 104 ntBASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 SNORD87-201ENST00000364849 89 ntBASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 RNY3P14-201ENST00000384309 102 ntBASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 AL079342.1-201ENST00000401460 267 ntBASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 MIR1261-201ENST00000408659 82 ntBASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 RN7SKP223-201ENST00000410582 62 ntBASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 RN7SKP51-201ENST00000410781 304 ntBASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 Y_RNA.646-201ENST00000410980 101 ntBASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 AC009310.1-201ENST00000414414 451 ntBASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 USP9YP16-201ENST00000430287 407 ntBASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 AC093019.1-201ENST00000443135 252 ntBASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 USP9YP23-201ENST00000455085 407 ntBASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 RPL30P15-201ENST00000457129 321 ntBASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 HMGN2P9-201ENST00000476875 229 ntBASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 RNU6-875P-201ENST00000516488 106 ntBASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 RNU6-307P-201ENST00000516743 106 ntBASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 SUMO2P18-201ENST00000518873 252 ntBASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 SUB1P4-201ENST00000566062 339 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms