Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AL390123.1-201ENST00000603216 237 ntBASIC0.65□□□□□ -2.31
ZIC4Q8N9L1 AC013244.2-201ENST00000603396 103 ntBASIC0.65□□□□□ -2.31
ZIC4Q8N9L1 AC064836.2-201ENST00000609491 462 ntBASIC0.65□□□□□ -2.31
ZIC4Q8N9L1 AC073349.3-201ENST00000617616 186 ntBASIC0.65□□□□□ -2.31
ZIC4Q8N9L1 AC139792.3-201ENST00000623525 224 ntBASIC0.65□□□□□ -2.31
ZIC4Q8N9L1 FER-210ENST00000628534 558 ntTSL 5 BASIC0.65□□□□□ -2.31
ZIC4Q8N9L1 MIR6866-201ENST00000638146 69 ntBASIC0.65□□□□□ -2.31
ZIC4Q8N9L1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.65□□□□□ -2.31
ZIC4Q8N9L1 RNU4-76P-201ENST00000364509 141 ntBASIC0.64□□□□□ -2.31
ZIC4Q8N9L1 RNU6-505P-201ENST00000384427 107 ntBASIC0.64□□□□□ -2.31
ZIC4Q8N9L1 MIR200A-201ENST00000384875 90 ntBASIC0.64□□□□□ -2.31
ZIC4Q8N9L1 RNU6-440P-201ENST00000390882 105 ntBASIC0.64□□□□□ -2.31
ZIC4Q8N9L1 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.64□□□□□ -2.31
ZIC4Q8N9L1 RNU6-1054P-201ENST00000411293 104 ntBASIC0.64□□□□□ -2.31
ZIC4Q8N9L1 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.64□□□□□ -2.31
ZIC4Q8N9L1 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.64□□□□□ -2.31
ZIC4Q8N9L1 AC073415.1-201ENST00000449240 153 ntBASIC0.64□□□□□ -2.31
ZIC4Q8N9L1 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.64□□□□□ -2.31
ZIC4Q8N9L1 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.64□□□□□ -2.31
ZIC4Q8N9L1 TRBVA-201ENST00000498804 316 ntBASIC0.64□□□□□ -2.31
ZIC4Q8N9L1 PDCD5P2-201ENST00000507570 312 ntBASIC0.64□□□□□ -2.31
ZIC4Q8N9L1 RNA5SP220-201ENST00000516298 104 ntBASIC0.64□□□□□ -2.31
ZIC4Q8N9L1 RNU1-117P-201ENST00000517041 158 ntBASIC0.64□□□□□ -2.31
ZIC4Q8N9L1 AC104576.1-201ENST00000524225 88 ntBASIC0.64□□□□□ -2.31
ZIC4Q8N9L1 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
ZIC4Q8N9L1 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.64□□□□□ -2.31
ZIC4Q8N9L1 AC025423.5-201ENST00000550230 219 ntBASIC0.64□□□□□ -2.31
ZIC4Q8N9L1 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.64□□□□□ -2.31
ZIC4Q8N9L1 MIR5695-201ENST00000579717 85 ntBASIC0.64□□□□□ -2.31
ZIC4Q8N9L1 AC068790.6-201ENST00000602558 258 ntBASIC0.64□□□□□ -2.31
ZIC4Q8N9L1 RMST_3.1-201ENST00000611651 109 ntBASIC0.64□□□□□ -2.31
ZIC4Q8N9L1 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.64□□□□□ -2.31
ZIC4Q8N9L1 U6.108-201ENST00000637764 58 ntBASIC0.64□□□□□ -2.31
ZIC4Q8N9L1 RNU6-1329P-201ENST00000365664 107 ntBASIC0.63□□□□□ -2.31
ZIC4Q8N9L1 RNU5A-6P-201ENST00000384136 116 ntBASIC0.63□□□□□ -2.31
ZIC4Q8N9L1 SNORA67.2-201ENST00000384300 149 ntBASIC0.63□□□□□ -2.31
ZIC4Q8N9L1 MIR660-201ENST00000385235 97 ntBASIC0.63□□□□□ -2.31
ZIC4Q8N9L1 MIR518E-201ENST00000385252 88 ntBASIC0.63□□□□□ -2.31
ZIC4Q8N9L1 AC245047.7-201ENST00000440265 293 ntBASIC0.63□□□□□ -2.31
ZIC4Q8N9L1 MTCO2P18-201ENST00000457151 658 ntBASIC0.63□□□□□ -2.31
ZIC4Q8N9L1 RNU7-94P-201ENST00000459576 63 ntBASIC0.63□□□□□ -2.31
ZIC4Q8N9L1 AC048334.1-201ENST00000477975 159 ntBASIC0.63□□□□□ -2.31
ZIC4Q8N9L1 AF186996.7-201ENST00000492781 209 ntBASIC0.63□□□□□ -2.31
ZIC4Q8N9L1 CCDC34P1-201ENST00000507441 517 ntBASIC0.63□□□□□ -2.31
ZIC4Q8N9L1 RNA5SP168-201ENST00000516642 112 ntBASIC0.63□□□□□ -2.31
ZIC4Q8N9L1 RNU6-430P-201ENST00000517078 107 ntBASIC0.63□□□□□ -2.31
ZIC4Q8N9L1 MTCO2P4-201ENST00000517968 247 ntBASIC0.63□□□□□ -2.31
ZIC4Q8N9L1 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.63□□□□□ -2.31
ZIC4Q8N9L1 AL137100.2-201ENST00000555786 315 ntBASIC0.63□□□□□ -2.31
ZIC4Q8N9L1 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.63□□□□□ -2.31
ZIC4Q8N9L1 AC093424.1-201ENST00000604999 338 ntBASIC0.63□□□□□ -2.31
ZIC4Q8N9L1 SNORD11B-201ENST00000607707 90 ntBASIC0.63□□□□□ -2.31
ZIC4Q8N9L1 AL603755.1-201ENST00000619504 163 ntBASIC0.63□□□□□ -2.31
ZIC4Q8N9L1 AC106754.2-201ENST00000623006 233 ntBASIC0.63□□□□□ -2.31
ZIC4Q8N9L1 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.63□□□□□ -2.31
ZIC4Q8N9L1 OR5AK4P-201ENST00000635912 903 ntBASIC0.63□□□□□ -2.31
ZIC4Q8N9L1 ZNF204P-201ENST00000416749 2397 ntBASIC0.63□□□□□ -2.31
ZIC4Q8N9L1 Y_RNA.159-201ENST00000363674 87 ntBASIC0.62□□□□□ -2.31
ZIC4Q8N9L1 RNU6-82P-201ENST00000363970 107 ntBASIC0.62□□□□□ -2.31
ZIC4Q8N9L1 Y_RNA.269-201ENST00000364685 89 ntBASIC0.62□□□□□ -2.31
ZIC4Q8N9L1 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.62□□□□□ -2.31
ZIC4Q8N9L1 AL049545.1-201ENST00000401856 572 ntBASIC0.62□□□□□ -2.31
ZIC4Q8N9L1 RNU6-1186P-201ENST00000410429 97 ntBASIC0.62□□□□□ -2.31
ZIC4Q8N9L1 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.62□□□□□ -2.31
ZIC4Q8N9L1 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.62□□□□□ -2.31
ZIC4Q8N9L1 AC002429.1-201ENST00000437672 148 ntBASIC0.62□□□□□ -2.31
ZIC4Q8N9L1 AC005002.2-201ENST00000438228 269 ntBASIC0.62□□□□□ -2.31
ZIC4Q8N9L1 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.62□□□□□ -2.31
ZIC4Q8N9L1 MTCO3P38-201ENST00000468910 766 ntBASIC0.62□□□□□ -2.31
ZIC4Q8N9L1 HMGB1P29-201ENST00000505659 499 ntBASIC0.62□□□□□ -2.31
ZIC4Q8N9L1 PSMC1P5-201ENST00000512850 177 ntBASIC0.62□□□□□ -2.31
ZIC4Q8N9L1 SNORD79.1-201ENST00000516069 84 ntBASIC0.62□□□□□ -2.31
ZIC4Q8N9L1 RN7SKP287-201ENST00000516546 266 ntBASIC0.62□□□□□ -2.31
ZIC4Q8N9L1 RN7SKP49-201ENST00000516675 260 ntBASIC0.62□□□□□ -2.31
ZIC4Q8N9L1 RNA5SP54-201ENST00000516951 92 ntBASIC0.62□□□□□ -2.31
ZIC4Q8N9L1 MTND1P35-201ENST00000526739 508 ntBASIC0.62□□□□□ -2.31
ZIC4Q8N9L1 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.62□□□□□ -2.31
ZIC4Q8N9L1 Z94722.1-201ENST00000604328 474 ntBASIC0.62□□□□□ -2.31
ZIC4Q8N9L1 AL354950.2-201ENST00000617939 290 ntBASIC0.62□□□□□ -2.31
ZIC4Q8N9L1 AC103705.1-201ENST00000619013 241 ntBASIC0.62□□□□□ -2.31
ZIC4Q8N9L1 MIR6835-201ENST00000621552 64 ntBASIC0.62□□□□□ -2.31
ZIC4Q8N9L1 AC027514.1-201ENST00000588561 1603 ntBASIC0.62□□□□□ -2.31
ZIC4Q8N9L1 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.61□□□□□ -2.31
ZIC4Q8N9L1 RNU6-1266P-201ENST00000362794 105 ntBASIC0.61□□□□□ -2.31
ZIC4Q8N9L1 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.61□□□□□ -2.31
ZIC4Q8N9L1 RNU6-42P-201ENST00000384165 107 ntBASIC0.61□□□□□ -2.31
ZIC4Q8N9L1 RNU6-933P-201ENST00000384424 107 ntBASIC0.61□□□□□ -2.31
ZIC4Q8N9L1 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
ZIC4Q8N9L1 SNORA12.1-201ENST00000390873 148 ntBASIC0.61□□□□□ -2.31
ZIC4Q8N9L1 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.61□□□□□ -2.31
ZIC4Q8N9L1 MIR548J-201ENST00000408833 112 ntBASIC0.61□□□□□ -2.31
ZIC4Q8N9L1 TPTE2P5-203ENST00000458118 728 ntBASIC0.61□□□□□ -2.31
ZIC4Q8N9L1 SNORD124-201ENST00000459577 104 ntBASIC0.61□□□□□ -2.31
ZIC4Q8N9L1 BET1P1-201ENST00000482276 359 ntBASIC0.61□□□□□ -2.31
ZIC4Q8N9L1 RNU6-322P-201ENST00000516010 103 ntBASIC0.61□□□□□ -2.31
ZIC4Q8N9L1 AC090142.3-201ENST00000519012 385 ntBASIC0.61□□□□□ -2.31
ZIC4Q8N9L1 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.61□□□□□ -2.31
ZIC4Q8N9L1 AC007834.2-201ENST00000536310 343 ntBASIC0.61□□□□□ -2.31
ZIC4Q8N9L1 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.61□□□□□ -2.31
ZIC4Q8N9L1 MIR4653-201ENST00000585107 83 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms