Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 SNORA48.1-201ENST00000390879 135 ntBASIC1.86□□□□□ -2.11
RTL3Q8N8U3 Y_RNA.579-201ENST00000390939 94 ntBASIC1.86□□□□□ -2.11
RTL3Q8N8U3 MIR1289-2-201ENST00000408360 111 ntBASIC1.86□□□□□ -2.11
RTL3Q8N8U3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.86□□□□□ -2.11
RTL3Q8N8U3 Z82188.1-201ENST00000436709 154 ntBASIC1.86□□□□□ -2.11
RTL3Q8N8U3 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.86□□□□□ -2.11
RTL3Q8N8U3 RPL30P15-201ENST00000457129 321 ntBASIC1.86□□□□□ -2.11
RTL3Q8N8U3 RN7SKP210-201ENST00000459176 261 ntBASIC1.86□□□□□ -2.11
RTL3Q8N8U3 RPL17P19-201ENST00000489069 552 ntBASIC1.86□□□□□ -2.11
RTL3Q8N8U3 AC093303.1-201ENST00000514549 295 ntBASIC1.86□□□□□ -2.11
RTL3Q8N8U3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.86□□□□□ -2.11
RTL3Q8N8U3 AL590705.4-201ENST00000532209 134 ntBASIC1.86□□□□□ -2.11
RTL3Q8N8U3 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.86□□□□□ -2.11
RTL3Q8N8U3 RMST_6.1-201ENST00000611980 203 ntBASIC1.86□□□□□ -2.11
RTL3Q8N8U3 AL590240.4-201ENST00000616908 390 ntBASIC1.86□□□□□ -2.11
RTL3Q8N8U3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.86□□□□□ -2.11
RTL3Q8N8U3 AC091925.1-201ENST00000623204 462 ntBASIC1.86□□□□□ -2.11
RTL3Q8N8U3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
RTL3Q8N8U3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.86□□□□□ -2.11
RTL3Q8N8U3 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
RTL3Q8N8U3 Y_RNA.48-201ENST00000362710 103 ntBASIC1.85□□□□□ -2.11
RTL3Q8N8U3 RNY1P16-201ENST00000363063 111 ntBASIC1.85□□□□□ -2.11
RTL3Q8N8U3 SNORD115-8-201ENST00000363856 82 ntBASIC1.85□□□□□ -2.11
RTL3Q8N8U3 SNORD115-38-201ENST00000365037 82 ntBASIC1.85□□□□□ -2.11
RTL3Q8N8U3 Y_RNA.332-201ENST00000365271 113 ntBASIC1.85□□□□□ -2.11
RTL3Q8N8U3 Y_RNA.394-201ENST00000383942 103 ntBASIC1.85□□□□□ -2.11
RTL3Q8N8U3 Y_RNA.419-201ENST00000384041 102 ntBASIC1.85□□□□□ -2.11
RTL3Q8N8U3 RNU6-17P-201ENST00000384245 107 ntBASIC1.85□□□□□ -2.11
RTL3Q8N8U3 RNU6-18P-201ENST00000384527 107 ntBASIC1.85□□□□□ -2.11
RTL3Q8N8U3 SNORA12.2-201ENST00000391040 156 ntBASIC1.85□□□□□ -2.11
RTL3Q8N8U3 SNORA40.18-201ENST00000391200 128 ntBASIC1.85□□□□□ -2.11
RTL3Q8N8U3 AC009310.1-201ENST00000414414 451 ntBASIC1.85□□□□□ -2.11
RTL3Q8N8U3 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.85□□□□□ -2.11
RTL3Q8N8U3 UBE2V1P7-201ENST00000446395 340 ntBASIC1.85□□□□□ -2.11
RTL3Q8N8U3 OR2AQ1P-201ENST00000451972 200 ntBASIC1.85□□□□□ -2.11
RTL3Q8N8U3 AC087477.1-201ENST00000465747 340 ntBASIC1.85□□□□□ -2.11
RTL3Q8N8U3 RNU6-470P-201ENST00000515954 104 ntBASIC1.85□□□□□ -2.11
RTL3Q8N8U3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.85□□□□□ -2.11
RTL3Q8N8U3 AC022254.1-201ENST00000567857 235 ntBASIC1.85□□□□□ -2.11
RTL3Q8N8U3 AL080274.1-201ENST00000605565 220 ntBASIC1.85□□□□□ -2.11
RTL3Q8N8U3 MIR6845-201ENST00000613182 61 ntBASIC1.85□□□□□ -2.11
RTL3Q8N8U3 PCGEM1.1-201ENST00000613431 131 ntBASIC1.85□□□□□ -2.11
RTL3Q8N8U3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.85□□□□□ -2.11
RTL3Q8N8U3 AC137590.2-201ENST00000619709 240 ntBASIC1.85□□□□□ -2.11
RTL3Q8N8U3 AC090574.1-201ENST00000623186 233 ntBASIC1.85□□□□□ -2.11
RTL3Q8N8U3 LINC02555-201ENST00000563933 1951 ntBASIC1.85□□□□□ -2.11
RTL3Q8N8U3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
RTL3Q8N8U3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.84□□□□□ -2.11
RTL3Q8N8U3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
RTL3Q8N8U3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
RTL3Q8N8U3 Y_RNA.146-201ENST00000363549 102 ntBASIC1.84□□□□□ -2.11
RTL3Q8N8U3 Y_RNA.577-201ENST00000384794 101 ntBASIC1.84□□□□□ -2.11
RTL3Q8N8U3 AC123900.1-201ENST00000420390 96 ntBASIC1.84□□□□□ -2.11
RTL3Q8N8U3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
RTL3Q8N8U3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.84□□□□□ -2.11
RTL3Q8N8U3 snoU13.30-201ENST00000458951 104 ntBASIC1.84□□□□□ -2.11
RTL3Q8N8U3 AC007215.1-201ENST00000464893 276 ntBASIC1.84□□□□□ -2.11
RTL3Q8N8U3 RN7SL274P-201ENST00000492268 272 ntBASIC1.84□□□□□ -2.11
RTL3Q8N8U3 AC022493.2-201ENST00000506122 481 ntBASIC1.84□□□□□ -2.11
RTL3Q8N8U3 RNU6-120P-201ENST00000516077 103 ntBASIC1.84□□□□□ -2.11
RTL3Q8N8U3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.84□□□□□ -2.11
RTL3Q8N8U3 RNU6-295P-201ENST00000516901 104 ntBASIC1.84□□□□□ -2.11
RTL3Q8N8U3 MIR3169-201ENST00000578032 83 ntBASIC1.84□□□□□ -2.11
RTL3Q8N8U3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.84□□□□□ -2.11
RTL3Q8N8U3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
RTL3Q8N8U3 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.84□□□□□ -2.11
RTL3Q8N8U3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
RTL3Q8N8U3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
RTL3Q8N8U3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RTL3Q8N8U3 RNU6-490P-201ENST00000362985 107 ntBASIC1.83□□□□□ -2.12
RTL3Q8N8U3 Y_RNA.112-201ENST00000363250 102 ntBASIC1.83□□□□□ -2.12
RTL3Q8N8U3 RNU6-137P-201ENST00000363680 108 ntBASIC1.83□□□□□ -2.12
RTL3Q8N8U3 Y_RNA.197-201ENST00000364004 102 ntBASIC1.83□□□□□ -2.12
RTL3Q8N8U3 Y_RNA.463-201ENST00000384271 102 ntBASIC1.83□□□□□ -2.12
RTL3Q8N8U3 RNA5SP494-201ENST00000410653 129 ntBASIC1.83□□□□□ -2.12
RTL3Q8N8U3 AC018865.2-201ENST00000423631 129 ntBASIC1.83□□□□□ -2.12
RTL3Q8N8U3 MTCO3P29-201ENST00000432119 779 ntBASIC1.83□□□□□ -2.12
RTL3Q8N8U3 AL353997.1-201ENST00000432936 108 ntBASIC1.83□□□□□ -2.12
RTL3Q8N8U3 AL137792.2-201ENST00000443484 235 ntBASIC1.83□□□□□ -2.12
RTL3Q8N8U3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.83□□□□□ -2.12
RTL3Q8N8U3 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.83□□□□□ -2.12
RTL3Q8N8U3 RNU1-131P-201ENST00000458943 161 ntBASIC1.83□□□□□ -2.12
RTL3Q8N8U3 AC027575.1-201ENST00000481064 460 ntBASIC1.83□□□□□ -2.12
RTL3Q8N8U3 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.83□□□□□ -2.12
RTL3Q8N8U3 RNU5F-4P-201ENST00000516581 114 ntBASIC1.83□□□□□ -2.12
RTL3Q8N8U3 SNORA44.1-201ENST00000517031 108 ntBASIC1.83□□□□□ -2.12
RTL3Q8N8U3 EIF4A1P12-201ENST00000551910 141 ntBASIC1.83□□□□□ -2.12
RTL3Q8N8U3 MIR4419B-201ENST00000577260 68 ntBASIC1.83□□□□□ -2.12
RTL3Q8N8U3 AC005786.1-201ENST00000588553 154 ntBASIC1.83□□□□□ -2.12
RTL3Q8N8U3 AC080078.3-201ENST00000605407 463 ntBASIC1.83□□□□□ -2.12
RTL3Q8N8U3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
RTL3Q8N8U3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.82□□□□□ -2.12
RTL3Q8N8U3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
RTL3Q8N8U3 Y_RNA.5-201ENST00000362334 102 ntBASIC1.82□□□□□ -2.12
RTL3Q8N8U3 RNU6-874P-201ENST00000362390 105 ntBASIC1.82□□□□□ -2.12
RTL3Q8N8U3 Y_RNA.252-201ENST00000364556 101 ntBASIC1.82□□□□□ -2.12
RTL3Q8N8U3 RNU6-378P-201ENST00000384324 107 ntBASIC1.82□□□□□ -2.12
RTL3Q8N8U3 RNA5SP213-201ENST00000391031 106 ntBASIC1.82□□□□□ -2.12
RTL3Q8N8U3 MIR208B-201ENST00000401172 77 ntBASIC1.82□□□□□ -2.12
RTL3Q8N8U3 MTCYBP10-201ENST00000424905 650 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 176.4 ms