Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.78□□□□□ -1.8
DEPDC4Q8N2C3 AC025750.2-201ENST00000442609 450 ntBASIC3.78□□□□□ -1.8
DEPDC4Q8N2C3 SNORD77.4-201ENST00000516158 81 ntBASIC3.78□□□□□ -1.8
DEPDC4Q8N2C3 Y_RNA.686-201ENST00000516548 134 ntBASIC3.78□□□□□ -1.8
DEPDC4Q8N2C3 RNU6-919P-201ENST00000516731 104 ntBASIC3.78□□□□□ -1.8
DEPDC4Q8N2C3 RNU2-56P-201ENST00000516826 190 ntBASIC3.78□□□□□ -1.8
DEPDC4Q8N2C3 RNU7-172P-201ENST00000517125 64 ntBASIC3.78□□□□□ -1.8
DEPDC4Q8N2C3 MRPL49P2-201ENST00000521066 465 ntBASIC3.78□□□□□ -1.8
DEPDC4Q8N2C3 NDUFA5P6-201ENST00000542110 379 ntBASIC3.78□□□□□ -1.8
DEPDC4Q8N2C3 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
DEPDC4Q8N2C3 MIR4429-201ENST00000580105 73 ntBASIC3.78□□□□□ -1.8
DEPDC4Q8N2C3 AL929325.1-201ENST00000603096 117 ntBASIC3.78□□□□□ -1.8
DEPDC4Q8N2C3 AC097639.2-201ENST00000603159 172 ntBASIC3.78□□□□□ -1.8
DEPDC4Q8N2C3 uc_338.4-201ENST00000616635 176 ntBASIC3.78□□□□□ -1.8
DEPDC4Q8N2C3 MIR3653-201ENST00000625572 110 ntBASIC3.78□□□□□ -1.8
DEPDC4Q8N2C3 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
DEPDC4Q8N2C3 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.78□□□□□ -1.8
DEPDC4Q8N2C3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.78□□□□□ -1.8
DEPDC4Q8N2C3 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
DEPDC4Q8N2C3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.78□□□□□ -1.8
DEPDC4Q8N2C3 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
DEPDC4Q8N2C3 AC093908.1-201ENST00000623125 8092 ntBASIC3.78□□□□□ -1.81
DEPDC4Q8N2C3 AC017083.1-201ENST00000428093 483 ntBASIC3.77□□□□□ -1.81
DEPDC4Q8N2C3 RPL23AP46-201ENST00000438548 490 ntBASIC3.77□□□□□ -1.81
DEPDC4Q8N2C3 CYCSP35-201ENST00000451978 304 ntBASIC3.77□□□□□ -1.81
DEPDC4Q8N2C3 AC091167.1-201ENST00000492017 396 ntBASIC3.77□□□□□ -1.81
DEPDC4Q8N2C3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.77□□□□□ -1.81
DEPDC4Q8N2C3 RPS29P21-201ENST00000496272 170 ntBASIC3.77□□□□□ -1.81
DEPDC4Q8N2C3 PHBP14-201ENST00000512887 367 ntBASIC3.77□□□□□ -1.81
DEPDC4Q8N2C3 PRELID2P1-201ENST00000552837 301 ntBASIC3.77□□□□□ -1.81
DEPDC4Q8N2C3 AL031274.2-201ENST00000599419 203 ntBASIC3.77□□□□□ -1.81
DEPDC4Q8N2C3 AL049861.1-201ENST00000603130 150 ntBASIC3.77□□□□□ -1.81
DEPDC4Q8N2C3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.77□□□□□ -1.81
DEPDC4Q8N2C3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
DEPDC4Q8N2C3 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
DEPDC4Q8N2C3 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
DEPDC4Q8N2C3 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
DEPDC4Q8N2C3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
DEPDC4Q8N2C3 RNU6-915P-201ENST00000364943 103 ntBASIC3.76□□□□□ -1.81
DEPDC4Q8N2C3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.76□□□□□ -1.81
DEPDC4Q8N2C3 SNORA26-201ENST00000391286 122 ntBASIC3.76□□□□□ -1.81
DEPDC4Q8N2C3 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.76□□□□□ -1.81
DEPDC4Q8N2C3 RPS4XP11-201ENST00000446897 772 ntBASIC3.76□□□□□ -1.81
DEPDC4Q8N2C3 CKS1BP2-201ENST00000497342 240 ntBASIC3.76□□□□□ -1.81
DEPDC4Q8N2C3 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.76□□□□□ -1.81
DEPDC4Q8N2C3 U2.20-201ENST00000613956 192 ntBASIC3.76□□□□□ -1.81
DEPDC4Q8N2C3 U6.73-201ENST00000619194 103 ntBASIC3.76□□□□□ -1.81
DEPDC4Q8N2C3 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
DEPDC4Q8N2C3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
DEPDC4Q8N2C3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
DEPDC4Q8N2C3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
DEPDC4Q8N2C3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
DEPDC4Q8N2C3 RNU11-5P-201ENST00000391216 129 ntBASIC3.75□□□□□ -1.81
DEPDC4Q8N2C3 MIR1251-201ENST00000408552 70 ntBASIC3.75□□□□□ -1.81
DEPDC4Q8N2C3 AL157831.1-201ENST00000426134 473 ntBASIC3.75□□□□□ -1.81
DEPDC4Q8N2C3 AL500522.2-201ENST00000448562 343 ntBASIC3.75□□□□□ -1.81
DEPDC4Q8N2C3 SNORD11-201ENST00000459124 84 ntBASIC3.75□□□□□ -1.81
DEPDC4Q8N2C3 snoU13.22-201ENST00000459428 104 ntBASIC3.75□□□□□ -1.81
DEPDC4Q8N2C3 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.75□□□□□ -1.81
DEPDC4Q8N2C3 CYCSP29-201ENST00000533731 318 ntBASIC3.75□□□□□ -1.81
DEPDC4Q8N2C3 AC090049.2-201ENST00000550377 109 ntBASIC3.75□□□□□ -1.81
DEPDC4Q8N2C3 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.75□□□□□ -1.81
DEPDC4Q8N2C3 Y_RNA.757-201ENST00000578934 114 ntBASIC3.75□□□□□ -1.81
DEPDC4Q8N2C3 AC244205.2-202ENST00000635781 342 ntBASIC3.75□□□□□ -1.81
DEPDC4Q8N2C3 RNU2-63P-201ENST00000410792 194 ntBASIC3.74□□□□□ -1.81
DEPDC4Q8N2C3 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.74□□□□□ -1.81
DEPDC4Q8N2C3 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.74□□□□□ -1.81
DEPDC4Q8N2C3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.74□□□□□ -1.81
DEPDC4Q8N2C3 RN7SL93P-201ENST00000463035 293 ntBASIC3.74□□□□□ -1.81
DEPDC4Q8N2C3 RNU6-1146P-201ENST00000516282 102 ntBASIC3.74□□□□□ -1.81
DEPDC4Q8N2C3 RNU7-143P-201ENST00000516781 65 ntBASIC3.74□□□□□ -1.81
DEPDC4Q8N2C3 AP003730.1-201ENST00000524605 285 ntBASIC3.74□□□□□ -1.81
DEPDC4Q8N2C3 AC011604.1-201ENST00000545978 196 ntBASIC3.74□□□□□ -1.81
DEPDC4Q8N2C3 RPL23AP91-201ENST00000569211 455 ntBASIC3.74□□□□□ -1.81
DEPDC4Q8N2C3 MIR4662B-201ENST00000579498 81 ntBASIC3.74□□□□□ -1.81
DEPDC4Q8N2C3 U6.98-201ENST00000637157 84 ntBASIC3.74□□□□□ -1.81
DEPDC4Q8N2C3 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
DEPDC4Q8N2C3 AC058791.1-201ENST00000608412 3198 ntBASIC3.74□□□□□ -1.81
DEPDC4Q8N2C3 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
DEPDC4Q8N2C3 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
DEPDC4Q8N2C3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
DEPDC4Q8N2C3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.74□□□□□ -1.81
DEPDC4Q8N2C3 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
DEPDC4Q8N2C3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
DEPDC4Q8N2C3 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
DEPDC4Q8N2C3 RNY1P11-201ENST00000363759 113 ntBASIC3.73□□□□□ -1.81
DEPDC4Q8N2C3 RNU6-1138P-201ENST00000365359 106 ntBASIC3.73□□□□□ -1.81
DEPDC4Q8N2C3 MIR562-201ENST00000384894 95 ntBASIC3.73□□□□□ -1.81
DEPDC4Q8N2C3 MIR520G-201ENST00000385064 90 ntBASIC3.73□□□□□ -1.81
DEPDC4Q8N2C3 RNA5SP171-201ENST00000391071 115 ntBASIC3.73□□□□□ -1.81
DEPDC4Q8N2C3 MIR1253-201ENST00000408273 105 ntBASIC3.73□□□□□ -1.81
DEPDC4Q8N2C3 AL035461.1-201ENST00000421490 332 ntBASIC3.73□□□□□ -1.81
DEPDC4Q8N2C3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.73□□□□□ -1.81
DEPDC4Q8N2C3 EEF1B2P7-201ENST00000451177 676 ntBASIC3.73□□□□□ -1.81
DEPDC4Q8N2C3 RPL29P14-201ENST00000495837 428 ntBASIC3.73□□□□□ -1.81
DEPDC4Q8N2C3 AC023141.11-201ENST00000508864 202 ntBASIC3.73□□□□□ -1.81
DEPDC4Q8N2C3 Y_RNA.712-201ENST00000517011 92 ntBASIC3.73□□□□□ -1.81
DEPDC4Q8N2C3 MIR3117-201ENST00000584034 78 ntBASIC3.73□□□□□ -1.81
DEPDC4Q8N2C3 AL591424.2-201ENST00000617023 128 ntBASIC3.73□□□□□ -1.81
DEPDC4Q8N2C3 MIR8059-201ENST00000620427 81 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms