Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AL162424.1-201ENST00000602325 221 ntBASIC3.08□□□□□ -1.92
SYNE4Q8N205 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.08□□□□□ -1.92
SYNE4Q8N205 AC024581.2-201ENST00000619986 252 ntBASIC3.08□□□□□ -1.92
SYNE4Q8N205 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SYNE4Q8N205 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
SYNE4Q8N205 Y_RNA.275-201ENST00000364726 110 ntBASIC3.07□□□□□ -1.92
SYNE4Q8N205 RNU6-1175P-201ENST00000365200 107 ntBASIC3.07□□□□□ -1.92
SYNE4Q8N205 RNU6-662P-201ENST00000384253 104 ntBASIC3.07□□□□□ -1.92
SYNE4Q8N205 AL356320.1-201ENST00000429616 163 ntBASIC3.07□□□□□ -1.92
SYNE4Q8N205 MTCO1P5-201ENST00000433573 344 ntBASIC3.07□□□□□ -1.92
SYNE4Q8N205 GPM6BP3-201ENST00000442797 145 ntBASIC3.07□□□□□ -1.92
SYNE4Q8N205 AC124916.1-201ENST00000444020 547 ntBASIC3.07□□□□□ -1.92
SYNE4Q8N205 SEPT14P8-201ENST00000508026 178 ntBASIC3.07□□□□□ -1.92
SYNE4Q8N205 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.07□□□□□ -1.92
SYNE4Q8N205 SNORA40.9-201ENST00000515895 93 ntBASIC3.07□□□□□ -1.92
SYNE4Q8N205 SNORA25.14-201ENST00000516481 132 ntBASIC3.07□□□□□ -1.92
SYNE4Q8N205 SNORA31.16-201ENST00000516773 139 ntBASIC3.07□□□□□ -1.92
SYNE4Q8N205 Y_RNA.703-201ENST00000516846 111 ntBASIC3.07□□□□□ -1.92
SYNE4Q8N205 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.07□□□□□ -1.92
SYNE4Q8N205 AC009163.5-201ENST00000575421 637 ntBASIC3.07□□□□□ -1.92
SYNE4Q8N205 AC091152.3-201ENST00000604227 325 ntBASIC3.07□□□□□ -1.92
SYNE4Q8N205 MIR3529-201ENST00000637713 78 ntBASIC3.07□□□□□ -1.92
SYNE4Q8N205 AC080128.1-201ENST00000474389 1917 ntBASIC3.07□□□□□ -1.92
SYNE4Q8N205 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SYNE4Q8N205 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SYNE4Q8N205 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
SYNE4Q8N205 Y_RNA.170-201ENST00000363746 110 ntBASIC3.06□□□□□ -1.92
SYNE4Q8N205 RNU6-873P-201ENST00000363833 107 ntBASIC3.06□□□□□ -1.92
SYNE4Q8N205 SNORA53-201ENST00000391141 249 ntBASIC3.06□□□□□ -1.92
SYNE4Q8N205 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.06□□□□□ -1.92
SYNE4Q8N205 AL033519.2-201ENST00000403958 392 ntBASIC3.06□□□□□ -1.92
SYNE4Q8N205 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.06□□□□□ -1.92
SYNE4Q8N205 RPL30P12-201ENST00000474666 353 ntBASIC3.06□□□□□ -1.92
SYNE4Q8N205 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.06□□□□□ -1.92
SYNE4Q8N205 CKS1BP2-201ENST00000497342 240 ntBASIC3.06□□□□□ -1.92
SYNE4Q8N205 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.06□□□□□ -1.92
SYNE4Q8N205 AC234781.5-201ENST00000508429 271 ntBASIC3.06□□□□□ -1.92
SYNE4Q8N205 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.06□□□□□ -1.92
SYNE4Q8N205 RNU6-346P-201ENST00000516288 111 ntBASIC3.06□□□□□ -1.92
SYNE4Q8N205 MTND5P41-201ENST00000517498 206 ntBASIC3.06□□□□□ -1.92
SYNE4Q8N205 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.06□□□□□ -1.92
SYNE4Q8N205 AK6P2-201ENST00000549020 471 ntBASIC3.06□□□□□ -1.92
SYNE4Q8N205 MIR4282-201ENST00000583613 67 ntBASIC3.06□□□□□ -1.92
SYNE4Q8N205 AC008749.1-201ENST00000597650 306 ntBASIC3.06□□□□□ -1.92
SYNE4Q8N205 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SYNE4Q8N205 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SYNE4Q8N205 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.05□□□□□ -1.92
SYNE4Q8N205 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.05□□□□□ -1.92
SYNE4Q8N205 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
SYNE4Q8N205 RNU6-923P-201ENST00000364753 107 ntBASIC3.05□□□□□ -1.92
SYNE4Q8N205 RNU6-21P-201ENST00000384710 107 ntBASIC3.05□□□□□ -1.92
SYNE4Q8N205 RNU6-1245P-201ENST00000411130 106 ntBASIC3.05□□□□□ -1.92
SYNE4Q8N205 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.05□□□□□ -1.92
SYNE4Q8N205 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.05□□□□□ -1.92
SYNE4Q8N205 MIR1273D-201ENST00000577266 86 ntBASIC3.05□□□□□ -1.92
SYNE4Q8N205 AC107294.3-201ENST00000609211 526 ntBASIC3.05□□□□□ -1.92
SYNE4Q8N205 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.05□□□□□ -1.92
SYNE4Q8N205 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SYNE4Q8N205 AC091564.4-201ENST00000533934 2194 ntBASIC3.05□□□□□ -1.92
SYNE4Q8N205 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SYNE4Q8N205 AC010889.1-201ENST00000566193 2666 ntBASIC3.05□□□□□ -1.92
SYNE4Q8N205 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.04□□□□□ -1.92
SYNE4Q8N205 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
SYNE4Q8N205 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.04□□□□□ -1.92
SYNE4Q8N205 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.04□□□□□ -1.92
SYNE4Q8N205 SNORA25.1-201ENST00000362326 128 ntBASIC3.04□□□□□ -1.92
SYNE4Q8N205 RNA5SP456-201ENST00000364002 114 ntBASIC3.04□□□□□ -1.92
SYNE4Q8N205 Y_RNA.338-201ENST00000365320 114 ntBASIC3.04□□□□□ -1.92
SYNE4Q8N205 Y_RNA.383-201ENST00000383855 97 ntBASIC3.04□□□□□ -1.92
SYNE4Q8N205 RNU6-1289P-201ENST00000384431 106 ntBASIC3.04□□□□□ -1.92
SYNE4Q8N205 RNU6-750P-201ENST00000390946 107 ntBASIC3.04□□□□□ -1.92
SYNE4Q8N205 RNU6-918P-201ENST00000391219 106 ntBASIC3.04□□□□□ -1.92
SYNE4Q8N205 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.04□□□□□ -1.92
SYNE4Q8N205 PTGES3P4-201ENST00000426243 356 ntBASIC3.04□□□□□ -1.92
SYNE4Q8N205 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.04□□□□□ -1.92
SYNE4Q8N205 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.04□□□□□ -1.92
SYNE4Q8N205 AC026436.1-201ENST00000510537 270 ntBASIC3.04□□□□□ -1.92
SYNE4Q8N205 RNA5SP281-201ENST00000516504 135 ntBASIC3.04□□□□□ -1.92
SYNE4Q8N205 SNORD59.2-201ENST00000516873 68 ntBASIC3.04□□□□□ -1.92
SYNE4Q8N205 SNORD19.2-201ENST00000516978 73 ntBASIC3.04□□□□□ -1.92
SYNE4Q8N205 RNA5SP380-201ENST00000517190 98 ntBASIC3.04□□□□□ -1.92
SYNE4Q8N205 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.04□□□□□ -1.92
SYNE4Q8N205 AP002001.1-203ENST00000534002 267 ntBASIC3.04□□□□□ -1.92
SYNE4Q8N205 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.04□□□□□ -1.92
SYNE4Q8N205 MIR3145-201ENST00000580727 82 ntBASIC3.04□□□□□ -1.92
SYNE4Q8N205 AL359198.2-201ENST00000611836 194 ntBASIC3.04□□□□□ -1.92
SYNE4Q8N205 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.04□□□□□ -1.92
SYNE4Q8N205 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SYNE4Q8N205 AP006437.1-201ENST00000641440 3685 ntBASIC3.04□□□□□ -1.92
SYNE4Q8N205 RNU6-1285P-201ENST00000363480 105 ntBASIC3.03□□□□□ -1.92
SYNE4Q8N205 RNU6-799P-201ENST00000363567 107 ntBASIC3.03□□□□□ -1.92
SYNE4Q8N205 RNU6-1141P-201ENST00000364520 107 ntBASIC3.03□□□□□ -1.92
SYNE4Q8N205 Y_RNA.331-201ENST00000365267 102 ntBASIC3.03□□□□□ -1.92
SYNE4Q8N205 RNU6-622P-201ENST00000384272 103 ntBASIC3.03□□□□□ -1.92
SYNE4Q8N205 RNU6-804P-201ENST00000384286 107 ntBASIC3.03□□□□□ -1.92
SYNE4Q8N205 Y_RNA.590-201ENST00000410140 107 ntBASIC3.03□□□□□ -1.92
SYNE4Q8N205 RN7SKP61-201ENST00000410642 295 ntBASIC3.03□□□□□ -1.92
SYNE4Q8N205 RNU5A-5P-201ENST00000411054 116 ntBASIC3.03□□□□□ -1.92
SYNE4Q8N205 RNU2-61P-201ENST00000411069 191 ntBASIC3.03□□□□□ -1.92
SYNE4Q8N205 RN7SL297P-201ENST00000483161 293 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms