Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
KRT78Q8N1N4 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.98
KRT78Q8N1N4 RNU1-76P-201ENST00000362903 159 ntBASIC2.7□□□□□ -1.98
KRT78Q8N1N4 snoU2_19.2-201ENST00000363024 80 ntBASIC2.7□□□□□ -1.98
KRT78Q8N1N4 Y_RNA.179-201ENST00000363844 90 ntBASIC2.7□□□□□ -1.98
KRT78Q8N1N4 Y_RNA.269-201ENST00000364685 89 ntBASIC2.7□□□□□ -1.98
KRT78Q8N1N4 MIR10B-201ENST00000385011 110 ntBASIC2.7□□□□□ -1.98
KRT78Q8N1N4 PCNPP3-201ENST00000393579 471 ntBASIC2.7□□□□□ -1.98
KRT78Q8N1N4 SNORD88.1-201ENST00000408684 91 ntBASIC2.7□□□□□ -1.98
KRT78Q8N1N4 Y_RNA.592-201ENST00000410274 109 ntBASIC2.7□□□□□ -1.98
KRT78Q8N1N4 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.7□□□□□ -1.98
KRT78Q8N1N4 AC009237.7-201ENST00000447357 229 ntBASIC2.7□□□□□ -1.98
KRT78Q8N1N4 AC093023.1-201ENST00000547375 507 ntBASIC2.7□□□□□ -1.98
KRT78Q8N1N4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.7□□□□□ -1.98
KRT78Q8N1N4 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.7□□□□□ -1.98
KRT78Q8N1N4 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
KRT78Q8N1N4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
KRT78Q8N1N4 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.69□□□□□ -1.98
KRT78Q8N1N4 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
KRT78Q8N1N4 RNU6-793P-201ENST00000384233 104 ntBASIC2.69□□□□□ -1.98
KRT78Q8N1N4 Y_RNA.458-201ENST00000384240 102 ntBASIC2.69□□□□□ -1.98
KRT78Q8N1N4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.69□□□□□ -1.98
KRT78Q8N1N4 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.69□□□□□ -1.98
KRT78Q8N1N4 AL139132.1-201ENST00000431587 344 ntBASIC2.69□□□□□ -1.98
KRT78Q8N1N4 RPS29P6-201ENST00000438196 145 ntBASIC2.69□□□□□ -1.98
KRT78Q8N1N4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.69□□□□□ -1.98
KRT78Q8N1N4 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.69□□□□□ -1.98
KRT78Q8N1N4 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.69□□□□□ -1.98
KRT78Q8N1N4 RNU6-991P-201ENST00000516168 107 ntBASIC2.69□□□□□ -1.98
KRT78Q8N1N4 RNA5SP76-201ENST00000516277 87 ntBASIC2.69□□□□□ -1.98
KRT78Q8N1N4 RNU6-911P-201ENST00000516523 104 ntBASIC2.69□□□□□ -1.98
KRT78Q8N1N4 RNU1-117P-201ENST00000517041 158 ntBASIC2.69□□□□□ -1.98
KRT78Q8N1N4 AC025754.2-201ENST00000606491 432 ntBASIC2.69□□□□□ -1.98
KRT78Q8N1N4 AC010999.1-201ENST00000611856 324 ntBASIC2.69□□□□□ -1.98
KRT78Q8N1N4 AC127459.3-201ENST00000624328 466 ntBASIC2.69□□□□□ -1.98
KRT78Q8N1N4 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.69□□□□□ -1.98
KRT78Q8N1N4 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
KRT78Q8N1N4 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.68□□□□□ -1.98
KRT78Q8N1N4 AL161431.1-201ENST00000618966 4205 ntBASIC2.68□□□□□ -1.98
KRT78Q8N1N4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
KRT78Q8N1N4 MIR335-201ENST00000362173 94 ntBASIC2.68□□□□□ -1.98
KRT78Q8N1N4 Y_RNA.16-201ENST00000362421 102 ntBASIC2.68□□□□□ -1.98
KRT78Q8N1N4 RNU1-62P-201ENST00000362599 164 ntBASIC2.68□□□□□ -1.98
KRT78Q8N1N4 RNY1-201ENST00000364228 113 ntBASIC2.68□□□□□ -1.98
KRT78Q8N1N4 RNU6-662P-201ENST00000384253 104 ntBASIC2.68□□□□□ -1.98
KRT78Q8N1N4 SNORA44-201ENST00000384584 132 ntBASIC2.68□□□□□ -1.98
KRT78Q8N1N4 MIR592-201ENST00000384959 97 ntBASIC2.68□□□□□ -1.98
KRT78Q8N1N4 RNU6-493P-201ENST00000391321 108 ntBASIC2.68□□□□□ -1.98
KRT78Q8N1N4 AL033519.2-201ENST00000403958 392 ntBASIC2.68□□□□□ -1.98
KRT78Q8N1N4 MIR548I2-201ENST00000408348 149 ntBASIC2.68□□□□□ -1.98
KRT78Q8N1N4 AC096920.1-201ENST00000423991 241 ntBASIC2.68□□□□□ -1.98
KRT78Q8N1N4 AL606753.1-201ENST00000427435 87 ntBASIC2.68□□□□□ -1.98
KRT78Q8N1N4 AC096638.1-201ENST00000444678 216 ntBASIC2.68□□□□□ -1.98
KRT78Q8N1N4 AC074290.1-201ENST00000448883 135 ntBASIC2.68□□□□□ -1.98
KRT78Q8N1N4 AC245102.2-201ENST00000448956 180 ntBASIC2.68□□□□□ -1.98
KRT78Q8N1N4 HMGN2P18-201ENST00000450680 270 ntBASIC2.68□□□□□ -1.98
KRT78Q8N1N4 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.68□□□□□ -1.98
KRT78Q8N1N4 RPS29P26-201ENST00000477483 171 ntBASIC2.68□□□□□ -1.98
KRT78Q8N1N4 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.68□□□□□ -1.98
KRT78Q8N1N4 AC018868.1-201ENST00000491307 315 ntBASIC2.68□□□□□ -1.98
KRT78Q8N1N4 AC010469.2-201ENST00000496412 480 ntBASIC2.68□□□□□ -1.98
KRT78Q8N1N4 RNU6-255P-201ENST00000516957 105 ntBASIC2.68□□□□□ -1.98
KRT78Q8N1N4 DEFB131C-201ENST00000528817 165 ntBASIC2.68□□□□□ -1.98
KRT78Q8N1N4 CYCSP26-201ENST00000534107 320 ntBASIC2.68□□□□□ -1.98
KRT78Q8N1N4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.68□□□□□ -1.98
KRT78Q8N1N4 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.68□□□□□ -1.98
KRT78Q8N1N4 MIR4753-201ENST00000585119 83 ntBASIC2.68□□□□□ -1.98
KRT78Q8N1N4 SNORD11B-201ENST00000607707 90 ntBASIC2.68□□□□□ -1.98
KRT78Q8N1N4 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRT78Q8N1N4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.67□□□□□ -1.98
KRT78Q8N1N4 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
KRT78Q8N1N4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
KRT78Q8N1N4 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRT78Q8N1N4 RNU6-545P-201ENST00000362681 104 ntBASIC2.67□□□□□ -1.98
KRT78Q8N1N4 RNU6-727P-201ENST00000363592 107 ntBASIC2.67□□□□□ -1.98
KRT78Q8N1N4 Y_RNA.200-201ENST00000364018 102 ntBASIC2.67□□□□□ -1.98
KRT78Q8N1N4 Y_RNA.352-201ENST00000365439 102 ntBASIC2.67□□□□□ -1.98
KRT78Q8N1N4 SNORD58.1-201ENST00000391313 66 ntBASIC2.67□□□□□ -1.98
KRT78Q8N1N4 MIR300-201ENST00000401138 83 ntBASIC2.67□□□□□ -1.98
KRT78Q8N1N4 AL139156.1-201ENST00000412785 841 ntBASIC2.67□□□□□ -1.98
KRT78Q8N1N4 EIF1P2-201ENST00000428233 350 ntBASIC2.67□□□□□ -1.98
KRT78Q8N1N4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.67□□□□□ -1.98
KRT78Q8N1N4 AL138752.1-201ENST00000452964 351 ntBASIC2.67□□□□□ -1.98
KRT78Q8N1N4 AC003982.1-202ENST00000469928 248 ntBASIC2.67□□□□□ -1.98
KRT78Q8N1N4 AC067942.3-201ENST00000512025 362 ntBASIC2.67□□□□□ -1.98
KRT78Q8N1N4 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.67□□□□□ -1.98
KRT78Q8N1N4 RNU4-71P-201ENST00000516258 113 ntBASIC2.67□□□□□ -1.98
KRT78Q8N1N4 RNU6-1338P-201ENST00000516328 91 ntBASIC2.67□□□□□ -1.98
KRT78Q8N1N4 Y_RNA.713-201ENST00000517013 96 ntBASIC2.67□□□□□ -1.98
KRT78Q8N1N4 AC136932.1-201ENST00000574771 208 ntBASIC2.67□□□□□ -1.98
KRT78Q8N1N4 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRT78Q8N1N4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.67□□□□□ -1.98
KRT78Q8N1N4 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.67□□□□□ -1.98
KRT78Q8N1N4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
KRT78Q8N1N4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
KRT78Q8N1N4 RNU6-1266P-201ENST00000362794 105 ntBASIC2.66□□□□□ -1.98
KRT78Q8N1N4 SNORD31B-201ENST00000364977 69 ntBASIC2.66□□□□□ -1.98
KRT78Q8N1N4 RNU6-125P-201ENST00000384505 107 ntBASIC2.66□□□□□ -1.98
KRT78Q8N1N4 MIR181B1-201ENST00000385240 110 ntBASIC2.66□□□□□ -1.98
KRT78Q8N1N4 SNORD115-46-201ENST00000390982 71 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 227.6 ms