Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
NPAS3Q8IXF0 AL133412.1-201ENST00000380194 2992 ntBASIC4.01□□□□□ -1.77
NPAS3Q8IXF0 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NPAS3Q8IXF0 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.01□□□□□ -1.77
NPAS3Q8IXF0 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NPAS3Q8IXF0 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
NPAS3Q8IXF0 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4□□□□□ -1.77
NPAS3Q8IXF0 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NPAS3Q8IXF0 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4□□□□□ -1.77
NPAS3Q8IXF0 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
NPAS3Q8IXF0 SNORA33-201ENST00000363664 130 ntBASIC4□□□□□ -1.77
NPAS3Q8IXF0 MIR199A2-201ENST00000385289 110 ntBASIC4□□□□□ -1.77
NPAS3Q8IXF0 PTMAP5-201ENST00000393073 333 ntBASIC4□□□□□ -1.77
NPAS3Q8IXF0 AL031121.1-201ENST00000406553 254 ntBASIC4□□□□□ -1.77
NPAS3Q8IXF0 RPL23AP48-201ENST00000406913 488 ntBASIC4□□□□□ -1.77
NPAS3Q8IXF0 MIR1185-2-201ENST00000408687 86 ntBASIC4□□□□□ -1.77
NPAS3Q8IXF0 SNORA3C-201ENST00000408792 125 ntBASIC4□□□□□ -1.77
NPAS3Q8IXF0 RNU6-938P-201ENST00000411285 103 ntBASIC4□□□□□ -1.77
NPAS3Q8IXF0 AC092047.1-201ENST00000424997 240 ntBASIC4□□□□□ -1.77
NPAS3Q8IXF0 AC010285.1-201ENST00000470580 392 ntBASIC4□□□□□ -1.77
NPAS3Q8IXF0 AC106707.2-201ENST00000484182 374 ntBASIC4□□□□□ -1.77
NPAS3Q8IXF0 HSPE1P18-201ENST00000517602 280 ntBASIC4□□□□□ -1.77
NPAS3Q8IXF0 MIR2681-201ENST00000581814 105 ntBASIC4□□□□□ -1.77
NPAS3Q8IXF0 MIR3922-201ENST00000585192 84 ntBASIC4□□□□□ -1.77
NPAS3Q8IXF0 AC244505.7-201ENST00000599675 272 ntBASIC4□□□□□ -1.77
NPAS3Q8IXF0 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4□□□□□ -1.77
NPAS3Q8IXF0 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4□□□□□ -1.77
NPAS3Q8IXF0 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
NPAS3Q8IXF0 AC004925.1-201ENST00000624256 2706 ntBASIC3.99□□□□□ -1.77
NPAS3Q8IXF0 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NPAS3Q8IXF0 Y_RNA.796-201ENST00000364268 102 ntBASIC3.99□□□□□ -1.77
NPAS3Q8IXF0 Y_RNA.799-201ENST00000364992 102 ntBASIC3.99□□□□□ -1.77
NPAS3Q8IXF0 SNORD115-35-201ENST00000365122 82 ntBASIC3.99□□□□□ -1.77
NPAS3Q8IXF0 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
NPAS3Q8IXF0 RNU6-1292P-201ENST00000383856 107 ntBASIC3.99□□□□□ -1.77
NPAS3Q8IXF0 SNORD61-201ENST00000384252 73 ntBASIC3.99□□□□□ -1.77
NPAS3Q8IXF0 SNORD14D-201ENST00000384390 87 ntBASIC3.99□□□□□ -1.77
NPAS3Q8IXF0 MIR483-201ENST00000385070 76 ntBASIC3.99□□□□□ -1.77
NPAS3Q8IXF0 U8.17-201ENST00000391292 132 ntBASIC3.99□□□□□ -1.77
NPAS3Q8IXF0 MIR1912-201ENST00000410389 80 ntBASIC3.99□□□□□ -1.77
NPAS3Q8IXF0 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.99□□□□□ -1.77
NPAS3Q8IXF0 SNRPGP10-201ENST00000432323 225 ntBASIC3.99□□□□□ -1.77
NPAS3Q8IXF0 AC018634.1-201ENST00000437554 401 ntBASIC3.99□□□□□ -1.77
NPAS3Q8IXF0 AC093663.1-201ENST00000497190 394 ntBASIC3.99□□□□□ -1.77
NPAS3Q8IXF0 RNA5SP20-201ENST00000515976 84 ntBASIC3.99□□□□□ -1.77
NPAS3Q8IXF0 AC022695.1-201ENST00000522089 237 ntBASIC3.99□□□□□ -1.77
NPAS3Q8IXF0 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.99□□□□□ -1.77
NPAS3Q8IXF0 MIR4662B-201ENST00000579498 81 ntBASIC3.99□□□□□ -1.77
NPAS3Q8IXF0 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
NPAS3Q8IXF0 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
NPAS3Q8IXF0 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.98□□□□□ -1.77
NPAS3Q8IXF0 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPAS3Q8IXF0 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.98□□□□□ -1.77
NPAS3Q8IXF0 Y_RNA.4-201ENST00000362333 112 ntBASIC3.98□□□□□ -1.77
NPAS3Q8IXF0 Y_RNA.10-201ENST00000362371 110 ntBASIC3.98□□□□□ -1.77
NPAS3Q8IXF0 RNU4-15P-201ENST00000362613 141 ntBASIC3.98□□□□□ -1.77
NPAS3Q8IXF0 Y_RNA.191-201ENST00000363972 113 ntBASIC3.98□□□□□ -1.77
NPAS3Q8IXF0 RNU6-944P-201ENST00000364023 107 ntBASIC3.98□□□□□ -1.77
NPAS3Q8IXF0 RNA5SP72-201ENST00000364442 117 ntBASIC3.98□□□□□ -1.77
NPAS3Q8IXF0 RNA5SP51-201ENST00000364750 119 ntBASIC3.98□□□□□ -1.77
NPAS3Q8IXF0 Y_RNA.298-201ENST00000364960 107 ntBASIC3.98□□□□□ -1.77
NPAS3Q8IXF0 RNU6-1138P-201ENST00000365359 106 ntBASIC3.98□□□□□ -1.77
NPAS3Q8IXF0 RNY1P4-201ENST00000384595 115 ntBASIC3.98□□□□□ -1.77
NPAS3Q8IXF0 MIR562-201ENST00000384894 95 ntBASIC3.98□□□□□ -1.77
NPAS3Q8IXF0 RNA5SP354-201ENST00000391247 136 ntBASIC3.98□□□□□ -1.77
NPAS3Q8IXF0 RN7SL293P-201ENST00000481765 281 ntBASIC3.98□□□□□ -1.77
NPAS3Q8IXF0 AC145146.1-201ENST00000496370 254 ntBASIC3.98□□□□□ -1.77
NPAS3Q8IXF0 RN7SKP18-201ENST00000516005 275 ntBASIC3.98□□□□□ -1.77
NPAS3Q8IXF0 ACA59.2-201ENST00000517061 156 ntBASIC3.98□□□□□ -1.77
NPAS3Q8IXF0 AP004371.1-201ENST00000525240 214 ntBASIC3.98□□□□□ -1.77
NPAS3Q8IXF0 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.98□□□□□ -1.77
NPAS3Q8IXF0 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.98□□□□□ -1.77
NPAS3Q8IXF0 AC006160.2-201ENST00000637708 154 ntBASIC3.98□□□□□ -1.77
NPAS3Q8IXF0 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.98□□□□□ -1.77
NPAS3Q8IXF0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPAS3Q8IXF0 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPAS3Q8IXF0 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
NPAS3Q8IXF0 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
NPAS3Q8IXF0 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
NPAS3Q8IXF0 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.97□□□□□ -1.77
NPAS3Q8IXF0 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NPAS3Q8IXF0 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NPAS3Q8IXF0 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NPAS3Q8IXF0 RNA5SP502-201ENST00000362694 119 ntBASIC3.97□□□□□ -1.77
NPAS3Q8IXF0 RNU6-271P-201ENST00000363858 105 ntBASIC3.97□□□□□ -1.77
NPAS3Q8IXF0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NPAS3Q8IXF0 MIR491-201ENST00000384877 84 ntBASIC3.97□□□□□ -1.77
NPAS3Q8IXF0 AL139095.1-201ENST00000404326 391 ntBASIC3.97□□□□□ -1.77
NPAS3Q8IXF0 AC004552.1-201ENST00000419089 348 ntBASIC3.97□□□□□ -1.77
NPAS3Q8IXF0 RPS26P3-201ENST00000470205 348 ntBASIC3.97□□□□□ -1.77
NPAS3Q8IXF0 AC090543.2-201ENST00000483963 348 ntBASIC3.97□□□□□ -1.77
NPAS3Q8IXF0 AC004057.1-201ENST00000485827 348 ntBASIC3.97□□□□□ -1.77
NPAS3Q8IXF0 RPS29P20-201ENST00000489592 171 ntBASIC3.97□□□□□ -1.77
NPAS3Q8IXF0 RNA5SP164-201ENST00000516533 110 ntBASIC3.97□□□□□ -1.77
NPAS3Q8IXF0 RNU7-6P-201ENST00000516845 62 ntBASIC3.97□□□□□ -1.77
NPAS3Q8IXF0 MIR3200-201ENST00000580767 85 ntBASIC3.97□□□□□ -1.77
NPAS3Q8IXF0 MIR3163-201ENST00000581592 73 ntBASIC3.97□□□□□ -1.77
NPAS3Q8IXF0 MIR4668-201ENST00000582284 70 ntBASIC3.97□□□□□ -1.77
NPAS3Q8IXF0 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
NPAS3Q8IXF0 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms