Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VRK3Q8IV63 MIR320B2-201ENST00000408479 138 ntBASIC2.82□□□□□ -1.96
VRK3Q8IV63 RNU2-2P-201ENST00000410396 191 ntBASIC2.82□□□□□ -1.96
VRK3Q8IV63 SEPT7P4-201ENST00000437076 306 ntBASIC2.82□□□□□ -1.96
VRK3Q8IV63 AL714022.1-201ENST00000439897 151 ntBASIC2.82□□□□□ -1.96
VRK3Q8IV63 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.82□□□□□ -1.96
VRK3Q8IV63 AC103975.1-201ENST00000482506 483 ntBASIC2.82□□□□□ -1.96
VRK3Q8IV63 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.82□□□□□ -1.96
VRK3Q8IV63 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.82□□□□□ -1.96
VRK3Q8IV63 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.82□□□□□ -1.96
VRK3Q8IV63 AC006445.2-201ENST00000510061 472 ntBASIC2.82□□□□□ -1.96
VRK3Q8IV63 RNU6-62P-201ENST00000516526 102 ntBASIC2.82□□□□□ -1.96
VRK3Q8IV63 RN7SKP282-201ENST00000516824 299 ntBASIC2.82□□□□□ -1.96
VRK3Q8IV63 SNORA31.26-201ENST00000517250 137 ntBASIC2.82□□□□□ -1.96
VRK3Q8IV63 AC100767.1-201ENST00000528178 123 ntBASIC2.82□□□□□ -1.96
VRK3Q8IV63 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.82□□□□□ -1.96
VRK3Q8IV63 HMGN2P15-201ENST00000585707 270 ntBASIC2.82□□□□□ -1.96
VRK3Q8IV63 AC005000.2-201ENST00000605468 310 ntBASIC2.82□□□□□ -1.96
VRK3Q8IV63 RNU2-4P-201ENST00000606190 192 ntBASIC2.82□□□□□ -1.96
VRK3Q8IV63 U2.15-201ENST00000611544 191 ntBASIC2.82□□□□□ -1.96
VRK3Q8IV63 U2.16-201ENST00000613119 191 ntBASIC2.82□□□□□ -1.96
VRK3Q8IV63 U2.12-201ENST00000613778 191 ntBASIC2.82□□□□□ -1.96
VRK3Q8IV63 U2.9-201ENST00000615427 191 ntBASIC2.82□□□□□ -1.96
VRK3Q8IV63 U2.11-201ENST00000616345 191 ntBASIC2.82□□□□□ -1.96
VRK3Q8IV63 U2.2-201ENST00000616535 191 ntBASIC2.82□□□□□ -1.96
VRK3Q8IV63 U2.3-201ENST00000617785 191 ntBASIC2.82□□□□□ -1.96
VRK3Q8IV63 U2.19-201ENST00000618602 191 ntBASIC2.82□□□□□ -1.96
VRK3Q8IV63 RNU2-1-201ENST00000618664 191 ntBASIC2.82□□□□□ -1.96
VRK3Q8IV63 U2.6-201ENST00000619225 191 ntBASIC2.82□□□□□ -1.96
VRK3Q8IV63 U2.5-201ENST00000619465 191 ntBASIC2.82□□□□□ -1.96
VRK3Q8IV63 U2.10-201ENST00000620268 191 ntBASIC2.82□□□□□ -1.96
VRK3Q8IV63 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
VRK3Q8IV63 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VRK3Q8IV63 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
VRK3Q8IV63 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.81□□□□□ -1.96
VRK3Q8IV63 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.81□□□□□ -1.96
VRK3Q8IV63 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
VRK3Q8IV63 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
VRK3Q8IV63 RNU6-1010P-201ENST00000362757 107 ntBASIC2.81□□□□□ -1.96
VRK3Q8IV63 RNU6-727P-201ENST00000363592 107 ntBASIC2.81□□□□□ -1.96
VRK3Q8IV63 RNU4-17P-201ENST00000365598 141 ntBASIC2.81□□□□□ -1.96
VRK3Q8IV63 RNU6-1168P-201ENST00000390831 104 ntBASIC2.81□□□□□ -1.96
VRK3Q8IV63 RNU6-381P-201ENST00000391259 108 ntBASIC2.81□□□□□ -1.96
VRK3Q8IV63 MIR208B-201ENST00000401172 77 ntBASIC2.81□□□□□ -1.96
VRK3Q8IV63 AC004866.1-201ENST00000411748 78 ntBASIC2.81□□□□□ -1.96
VRK3Q8IV63 RPS29P6-201ENST00000438196 145 ntBASIC2.81□□□□□ -1.96
VRK3Q8IV63 U8.19-201ENST00000459095 133 ntBASIC2.81□□□□□ -1.96
VRK3Q8IV63 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.81□□□□□ -1.96
VRK3Q8IV63 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VRK3Q8IV63 RNU6-344P-201ENST00000516635 111 ntBASIC2.81□□□□□ -1.96
VRK3Q8IV63 SNORD19.2-201ENST00000516978 73 ntBASIC2.81□□□□□ -1.96
VRK3Q8IV63 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.81□□□□□ -1.96
VRK3Q8IV63 AC136628.3-201ENST00000521868 290 ntBASIC2.81□□□□□ -1.96
VRK3Q8IV63 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.81□□□□□ -1.96
VRK3Q8IV63 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.81□□□□□ -1.96
VRK3Q8IV63 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.81□□□□□ -1.96
VRK3Q8IV63 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.81□□□□□ -1.96
VRK3Q8IV63 AC006380.1-201ENST00000603598 186 ntBASIC2.81□□□□□ -1.96
VRK3Q8IV63 AL034555.1-201ENST00000604816 211 ntBASIC2.81□□□□□ -1.96
VRK3Q8IV63 Y_RNA.778-201ENST00000620203 90 ntBASIC2.81□□□□□ -1.96
VRK3Q8IV63 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
VRK3Q8IV63 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.81□□□□□ -1.96
VRK3Q8IV63 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
VRK3Q8IV63 GABRG2-229ENST00000641017 3628 ntBASIC2.81□□□□□ -1.96
VRK3Q8IV63 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.8□□□□□ -1.96
VRK3Q8IV63 AC004944.1-201ENST00000517807 3059 ntBASIC2.8□□□□□ -1.96
VRK3Q8IV63 AC002546.1-201ENST00000588041 2504 ntBASIC2.8□□□□□ -1.96
VRK3Q8IV63 Y_RNA.40-201ENST00000362645 93 ntBASIC2.8□□□□□ -1.96
VRK3Q8IV63 RNU6-275P-201ENST00000364910 107 ntBASIC2.8□□□□□ -1.96
VRK3Q8IV63 Y_RNA.357-201ENST00000365487 109 ntBASIC2.8□□□□□ -1.96
VRK3Q8IV63 U8.9-201ENST00000365667 134 ntBASIC2.8□□□□□ -1.96
VRK3Q8IV63 Y_RNA.415-201ENST00000384012 112 ntBASIC2.8□□□□□ -1.96
VRK3Q8IV63 RNU6-748P-201ENST00000384648 107 ntBASIC2.8□□□□□ -1.96
VRK3Q8IV63 MIR181A2-201ENST00000384863 110 ntBASIC2.8□□□□□ -1.96
VRK3Q8IV63 RNU6-239P-201ENST00000390990 99 ntBASIC2.8□□□□□ -1.96
VRK3Q8IV63 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.8□□□□□ -1.96
VRK3Q8IV63 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.8□□□□□ -1.96
VRK3Q8IV63 AIMP1P2-201ENST00000425294 312 ntBASIC2.8□□□□□ -1.96
VRK3Q8IV63 AL135790.2-201ENST00000437701 267 ntBASIC2.8□□□□□ -1.96
VRK3Q8IV63 RNA5SP310-201ENST00000459084 116 ntBASIC2.8□□□□□ -1.96
VRK3Q8IV63 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.8□□□□□ -1.96
VRK3Q8IV63 AC010409.1-201ENST00000487382 476 ntBASIC2.8□□□□□ -1.96
VRK3Q8IV63 AC083906.5-201ENST00000503722 328 ntBASIC2.8□□□□□ -1.96
VRK3Q8IV63 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.8□□□□□ -1.96
VRK3Q8IV63 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.8□□□□□ -1.96
VRK3Q8IV63 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.8□□□□□ -1.96
VRK3Q8IV63 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.8□□□□□ -1.96
VRK3Q8IV63 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
VRK3Q8IV63 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
VRK3Q8IV63 AC068700.1-201ENST00000565862 3754 ntBASIC2.79□□□□□ -1.96
VRK3Q8IV63 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VRK3Q8IV63 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VRK3Q8IV63 Y_RNA.81-201ENST00000362997 102 ntBASIC2.79□□□□□ -1.96
VRK3Q8IV63 Y_RNA.182-201ENST00000363880 111 ntBASIC2.79□□□□□ -1.96
VRK3Q8IV63 Y_RNA.243-201ENST00000364481 109 ntBASIC2.79□□□□□ -1.96
VRK3Q8IV63 RNU6-818P-201ENST00000364837 108 ntBASIC2.79□□□□□ -1.96
VRK3Q8IV63 SNORA22C-201ENST00000384614 134 ntBASIC2.79□□□□□ -1.96
VRK3Q8IV63 MIR569-201ENST00000385228 96 ntBASIC2.79□□□□□ -1.96
VRK3Q8IV63 RNU6-1154P-201ENST00000391001 104 ntBASIC2.79□□□□□ -1.96
VRK3Q8IV63 RNU6-735P-201ENST00000410612 107 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms