Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AL031274.2-201ENST00000599419 203 ntBASIC4.1□□□□□ -1.75
RNF135Q8IUD6 MIR6852-201ENST00000621699 66 ntBASIC4.1□□□□□ -1.75
RNF135Q8IUD6 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.09□□□□□ -1.75
RNF135Q8IUD6 LINC02471-203ENST00000641941 4752 ntBASIC4.09□□□□□ -1.75
RNF135Q8IUD6 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RNF135Q8IUD6 RNU6-1336P-201ENST00000383886 109 ntBASIC4.09□□□□□ -1.75
RNF135Q8IUD6 RNU6-1323P-201ENST00000384025 107 ntBASIC4.09□□□□□ -1.75
RNF135Q8IUD6 MIR128-1-201ENST00000384921 82 ntBASIC4.09□□□□□ -1.75
RNF135Q8IUD6 MIR1294-201ENST00000408503 142 ntBASIC4.09□□□□□ -1.75
RNF135Q8IUD6 RNA5SP306-201ENST00000411087 107 ntBASIC4.09□□□□□ -1.75
RNF135Q8IUD6 AC115115.1-201ENST00000449927 248 ntBASIC4.09□□□□□ -1.75
RNF135Q8IUD6 RPL36AP21-201ENST00000490372 323 ntBASIC4.09□□□□□ -1.75
RNF135Q8IUD6 RNA5SP112-201ENST00000515937 99 ntBASIC4.09□□□□□ -1.75
RNF135Q8IUD6 MIR4474-201ENST00000579189 78 ntBASIC4.09□□□□□ -1.75
RNF135Q8IUD6 AC004832.5-201ENST00000608677 401 ntBASIC4.09□□□□□ -1.75
RNF135Q8IUD6 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.09□□□□□ -1.75
RNF135Q8IUD6 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
RNF135Q8IUD6 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
RNF135Q8IUD6 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.75
RNF135Q8IUD6 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
RNF135Q8IUD6 Z82209.1-201ENST00000422141 2135 ntBASIC4.09□□□□□ -1.76
RNF135Q8IUD6 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
RNF135Q8IUD6 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RNF135Q8IUD6 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RNF135Q8IUD6 Y_RNA.114-201ENST00000363265 113 ntBASIC4.08□□□□□ -1.76
RNF135Q8IUD6 SNORD45.3-201ENST00000363836 72 ntBASIC4.08□□□□□ -1.76
RNF135Q8IUD6 SNORD58C-201ENST00000365223 64 ntBASIC4.08□□□□□ -1.76
RNF135Q8IUD6 SNORD14D-201ENST00000384390 87 ntBASIC4.08□□□□□ -1.76
RNF135Q8IUD6 RNU6-880P-201ENST00000384526 107 ntBASIC4.08□□□□□ -1.76
RNF135Q8IUD6 AC245047.4-201ENST00000433189 144 ntBASIC4.08□□□□□ -1.76
RNF135Q8IUD6 AC010598.1-201ENST00000510378 103 ntBASIC4.08□□□□□ -1.76
RNF135Q8IUD6 SCARNA14-201ENST00000516903 136 ntBASIC4.08□□□□□ -1.76
RNF135Q8IUD6 YPEL5P3-201ENST00000547227 352 ntBASIC4.08□□□□□ -1.76
RNF135Q8IUD6 POLR3GP1-201ENST00000594073 261 ntBASIC4.08□□□□□ -1.76
RNF135Q8IUD6 uc_338.28-201ENST00000612082 187 ntBASIC4.08□□□□□ -1.76
RNF135Q8IUD6 AL121890.5-201ENST00000620848 304 ntBASIC4.08□□□□□ -1.76
RNF135Q8IUD6 UCA1.1-201ENST00000620952 75 ntBASIC4.08□□□□□ -1.76
RNF135Q8IUD6 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.08□□□□□ -1.76
RNF135Q8IUD6 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
RNF135Q8IUD6 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
RNF135Q8IUD6 AC138915.1-201ENST00000565427 1685 ntBASIC4.07□□□□□ -1.76
RNF135Q8IUD6 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
RNF135Q8IUD6 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
RNF135Q8IUD6 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RNF135Q8IUD6 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RNF135Q8IUD6 SNORA3C-201ENST00000408792 125 ntBASIC4.07□□□□□ -1.76
RNF135Q8IUD6 Y_RNA.622-201ENST00000411091 108 ntBASIC4.07□□□□□ -1.76
RNF135Q8IUD6 RNA5SP39-201ENST00000411245 120 ntBASIC4.07□□□□□ -1.76
RNF135Q8IUD6 AC009414.1-201ENST00000427200 443 ntBASIC4.07□□□□□ -1.76
RNF135Q8IUD6 SNORD65B-201ENST00000459126 73 ntBASIC4.07□□□□□ -1.76
RNF135Q8IUD6 RNU6-221P-201ENST00000459541 99 ntBASIC4.07□□□□□ -1.76
RNF135Q8IUD6 MRPS36P2-201ENST00000512569 299 ntBASIC4.07□□□□□ -1.76
RNF135Q8IUD6 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.07□□□□□ -1.76
RNF135Q8IUD6 RNU7-116P-201ENST00000516940 62 ntBASIC4.07□□□□□ -1.76
RNF135Q8IUD6 RNU2-60P-201ENST00000517290 128 ntBASIC4.07□□□□□ -1.76
RNF135Q8IUD6 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.07□□□□□ -1.76
RNF135Q8IUD6 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.07□□□□□ -1.76
RNF135Q8IUD6 MIR378D2-201ENST00000580636 98 ntBASIC4.07□□□□□ -1.76
RNF135Q8IUD6 AC005972.2-201ENST00000604690 348 ntBASIC4.07□□□□□ -1.76
RNF135Q8IUD6 AL049781.1-201ENST00000623195 3585 ntBASIC4.07□□□□□ -1.76
RNF135Q8IUD6 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RNF135Q8IUD6 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RNF135Q8IUD6 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RNF135Q8IUD6 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RNF135Q8IUD6 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RNF135Q8IUD6 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
RNF135Q8IUD6 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC4.06□□□□□ -1.76
RNF135Q8IUD6 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RNF135Q8IUD6 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RNF135Q8IUD6 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.06□□□□□ -1.76
RNF135Q8IUD6 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.06□□□□□ -1.76
RNF135Q8IUD6 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
RNF135Q8IUD6 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RNF135Q8IUD6 Y_RNA.120-201ENST00000363304 110 ntBASIC4.06□□□□□ -1.76
RNF135Q8IUD6 RNU6-975P-201ENST00000384296 105 ntBASIC4.06□□□□□ -1.76
RNF135Q8IUD6 RNU1-101P-201ENST00000391171 127 ntBASIC4.06□□□□□ -1.76
RNF135Q8IUD6 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.06□□□□□ -1.76
RNF135Q8IUD6 MLLT10P1-201ENST00000418346 262 ntBASIC4.06□□□□□ -1.76
RNF135Q8IUD6 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC4.06□□□□□ -1.76
RNF135Q8IUD6 RN7SL601P-201ENST00000471221 293 ntBASIC4.06□□□□□ -1.76
RNF135Q8IUD6 AC093663.1-201ENST00000497190 394 ntBASIC4.06□□□□□ -1.76
RNF135Q8IUD6 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.06□□□□□ -1.76
RNF135Q8IUD6 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
RNF135Q8IUD6 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RNF135Q8IUD6 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
RNF135Q8IUD6 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
RNF135Q8IUD6 GABRG2-229ENST00000641017 3628 ntBASIC4.06□□□□□ -1.76
RNF135Q8IUD6 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RNF135Q8IUD6 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RNF135Q8IUD6 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.05□□□□□ -1.76
RNF135Q8IUD6 AL356292.1-201ENST00000283110 373 ntBASIC4.05□□□□□ -1.76
RNF135Q8IUD6 RNA5SP399-201ENST00000364003 117 ntBASIC4.05□□□□□ -1.76
RNF135Q8IUD6 SNORA14A-201ENST00000364773 135 ntBASIC4.05□□□□□ -1.76
RNF135Q8IUD6 RNU6-234P-201ENST00000365229 104 ntBASIC4.05□□□□□ -1.76
RNF135Q8IUD6 RNU6-1083P-201ENST00000384022 107 ntBASIC4.05□□□□□ -1.76
RNF135Q8IUD6 MIR1278-201ENST00000408753 81 ntBASIC4.05□□□□□ -1.76
RNF135Q8IUD6 RNU6-57P-201ENST00000411348 103 ntBASIC4.05□□□□□ -1.76
RNF135Q8IUD6 RNU6-437P-201ENST00000459408 95 ntBASIC4.05□□□□□ -1.76
RNF135Q8IUD6 RPL23AP54-201ENST00000495129 419 ntBASIC4.05□□□□□ -1.76
RNF135Q8IUD6 AC083906.5-201ENST00000503722 328 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 158.7 ms