Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 MIR4753-201ENST00000585119 83 ntBASIC4.25□□□□□ -1.73
SH3RF1Q7Z6J0 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.25□□□□□ -1.73
SH3RF1Q7Z6J0 AC025166.1-201ENST00000612411 163 ntBASIC4.25□□□□□ -1.73
SH3RF1Q7Z6J0 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.25□□□□□ -1.73
SH3RF1Q7Z6J0 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
SH3RF1Q7Z6J0 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SH3RF1Q7Z6J0 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.25□□□□□ -1.73
SH3RF1Q7Z6J0 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC4.24□□□□□ -1.73
SH3RF1Q7Z6J0 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SH3RF1Q7Z6J0 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SH3RF1Q7Z6J0 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SH3RF1Q7Z6J0 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SH3RF1Q7Z6J0 RNU6-1107P-201ENST00000364817 104 ntBASIC4.24□□□□□ -1.73
SH3RF1Q7Z6J0 RNU6-573P-201ENST00000383938 106 ntBASIC4.24□□□□□ -1.73
SH3RF1Q7Z6J0 RNU7-57P-201ENST00000459540 60 ntBASIC4.24□□□□□ -1.73
SH3RF1Q7Z6J0 AC083906.5-201ENST00000503722 328 ntBASIC4.24□□□□□ -1.73
SH3RF1Q7Z6J0 AC010598.1-201ENST00000510378 103 ntBASIC4.24□□□□□ -1.73
SH3RF1Q7Z6J0 RNA5SP153-201ENST00000516498 76 ntBASIC4.24□□□□□ -1.73
SH3RF1Q7Z6J0 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.24□□□□□ -1.73
SH3RF1Q7Z6J0 SCARNA15.3-201ENST00000626315 122 ntBASIC4.24□□□□□ -1.73
SH3RF1Q7Z6J0 SCARNA4.1-201ENST00000628597 123 ntBASIC4.24□□□□□ -1.73
SH3RF1Q7Z6J0 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4.24□□□□□ -1.73
SH3RF1Q7Z6J0 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.23□□□□□ -1.73
SH3RF1Q7Z6J0 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SH3RF1Q7Z6J0 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.23□□□□□ -1.73
SH3RF1Q7Z6J0 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SH3RF1Q7Z6J0 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SH3RF1Q7Z6J0 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SH3RF1Q7Z6J0 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SH3RF1Q7Z6J0 AL356292.1-201ENST00000283110 373 ntBASIC4.23□□□□□ -1.73
SH3RF1Q7Z6J0 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SH3RF1Q7Z6J0 RNU6-756P-201ENST00000383997 107 ntBASIC4.23□□□□□ -1.73
SH3RF1Q7Z6J0 SNORA26-201ENST00000391286 122 ntBASIC4.23□□□□□ -1.73
SH3RF1Q7Z6J0 MIR300-201ENST00000401138 83 ntBASIC4.23□□□□□ -1.73
SH3RF1Q7Z6J0 AC008155.2-201ENST00000464337 397 ntBASIC4.23□□□□□ -1.73
SH3RF1Q7Z6J0 RPL32P34-201ENST00000486380 400 ntBASIC4.23□□□□□ -1.73
SH3RF1Q7Z6J0 RPL23AP94-201ENST00000512518 302 ntBASIC4.23□□□□□ -1.73
SH3RF1Q7Z6J0 MIR2114-201ENST00000516645 80 ntBASIC4.23□□□□□ -1.73
SH3RF1Q7Z6J0 AL021707.8-201ENST00000609428 183 ntBASIC4.23□□□□□ -1.73
SH3RF1Q7Z6J0 AL138880.2-201ENST00000616214 239 ntBASIC4.23□□□□□ -1.73
SH3RF1Q7Z6J0 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SH3RF1Q7Z6J0 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SH3RF1Q7Z6J0 MTND5P18-201ENST00000445624 1801 ntBASIC4.23□□□□□ -1.73
SH3RF1Q7Z6J0 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.23□□□□□ -1.73
SH3RF1Q7Z6J0 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.22□□□□□ -1.73
SH3RF1Q7Z6J0 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.22□□□□□ -1.73
SH3RF1Q7Z6J0 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SH3RF1Q7Z6J0 MIR181A2-201ENST00000384863 110 ntBASIC4.22□□□□□ -1.73
SH3RF1Q7Z6J0 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.22□□□□□ -1.73
SH3RF1Q7Z6J0 AL139095.1-201ENST00000404326 391 ntBASIC4.22□□□□□ -1.73
SH3RF1Q7Z6J0 AC126124.2-201ENST00000413542 321 ntBASIC4.22□□□□□ -1.73
SH3RF1Q7Z6J0 NDUFB1P1-201ENST00000435191 180 ntBASIC4.22□□□□□ -1.73
SH3RF1Q7Z6J0 RNU7-23P-201ENST00000459465 62 ntBASIC4.22□□□□□ -1.73
SH3RF1Q7Z6J0 RPL36AP48-201ENST00000485521 314 ntBASIC4.22□□□□□ -1.73
SH3RF1Q7Z6J0 RN7SKP83-201ENST00000516512 178 ntBASIC4.22□□□□□ -1.73
SH3RF1Q7Z6J0 RMST_8.1-201ENST00000610287 165 ntBASIC4.22□□□□□ -1.73
SH3RF1Q7Z6J0 MIR8058-201ENST00000615737 89 ntBASIC4.22□□□□□ -1.73
SH3RF1Q7Z6J0 AC002076.2-201ENST00000617362 122 ntBASIC4.22□□□□□ -1.73
SH3RF1Q7Z6J0 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC4.22□□□□□ -1.73
SH3RF1Q7Z6J0 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
SH3RF1Q7Z6J0 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.22□□□□□ -1.73
SH3RF1Q7Z6J0 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SH3RF1Q7Z6J0 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.22□□□□□ -1.73
SH3RF1Q7Z6J0 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SH3RF1Q7Z6J0 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
SH3RF1Q7Z6J0 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
SH3RF1Q7Z6J0 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SH3RF1Q7Z6J0 RNU6-750P-201ENST00000390946 107 ntBASIC4.21□□□□□ -1.74
SH3RF1Q7Z6J0 ATP5A1P2-201ENST00000412323 255 ntBASIC4.21□□□□□ -1.74
SH3RF1Q7Z6J0 EDDM3CP-201ENST00000415977 425 ntBASIC4.21□□□□□ -1.74
SH3RF1Q7Z6J0 SNORD65B-201ENST00000459126 73 ntBASIC4.21□□□□□ -1.74
SH3RF1Q7Z6J0 AC080013.2-201ENST00000460866 323 ntBASIC4.21□□□□□ -1.74
SH3RF1Q7Z6J0 RNA5SP20-201ENST00000515976 84 ntBASIC4.21□□□□□ -1.74
SH3RF1Q7Z6J0 RN7SKP12-201ENST00000516275 143 ntBASIC4.21□□□□□ -1.74
SH3RF1Q7Z6J0 RNU6-1098P-201ENST00000516772 96 ntBASIC4.21□□□□□ -1.74
SH3RF1Q7Z6J0 MIR2681-201ENST00000581814 105 ntBASIC4.21□□□□□ -1.74
SH3RF1Q7Z6J0 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
SH3RF1Q7Z6J0 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SH3RF1Q7Z6J0 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.21□□□□□ -1.74
SH3RF1Q7Z6J0 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.21□□□□□ -1.74
SH3RF1Q7Z6J0 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.74
SH3RF1Q7Z6J0 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SH3RF1Q7Z6J0 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SH3RF1Q7Z6J0 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.2□□□□□ -1.74
SH3RF1Q7Z6J0 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.2□□□□□ -1.74
SH3RF1Q7Z6J0 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SH3RF1Q7Z6J0 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SH3RF1Q7Z6J0 Y_RNA.163-201ENST00000363702 113 ntBASIC4.2□□□□□ -1.74
SH3RF1Q7Z6J0 RNU6-309P-201ENST00000364573 106 ntBASIC4.2□□□□□ -1.74
SH3RF1Q7Z6J0 MIR488-201ENST00000365739 83 ntBASIC4.2□□□□□ -1.74
SH3RF1Q7Z6J0 RNU6-198P-201ENST00000384258 104 ntBASIC4.2□□□□□ -1.74
SH3RF1Q7Z6J0 SNORD14D-201ENST00000384390 87 ntBASIC4.2□□□□□ -1.74
SH3RF1Q7Z6J0 MIR1283-1-201ENST00000408494 87 ntBASIC4.2□□□□□ -1.74
SH3RF1Q7Z6J0 RPS3AP1-201ENST00000413190 320 ntBASIC4.2□□□□□ -1.74
SH3RF1Q7Z6J0 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC4.2□□□□□ -1.74
SH3RF1Q7Z6J0 AC109327.2-201ENST00000448339 378 ntBASIC4.2□□□□□ -1.74
SH3RF1Q7Z6J0 HMGN2P16-201ENST00000456802 261 ntBASIC4.2□□□□□ -1.74
SH3RF1Q7Z6J0 RN7SL601P-201ENST00000471221 293 ntBASIC4.2□□□□□ -1.74
SH3RF1Q7Z6J0 SNORA40.13-201ENST00000516379 120 ntBASIC4.2□□□□□ -1.74
SH3RF1Q7Z6J0 SNORA18.4-201ENST00000516440 124 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms